RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 PDE4AP27815 886 aa11.27□□□□□ -0.61
SCARB2-209ENST00000638409 FAM69CQ0P6D2 419 aa11.27□□□□□ -0.61
SCARB2-209ENST00000638409 CREBZFQ9NS37 354 aa11.27□□□□□ -0.61
SCARB2-209ENST00000638409 GIGYF2Q6Y7W6 1299 aaKnown RBP11.27□□□□□ -0.61
SCARB2-209ENST00000638409 MAP3K1Q13233 1512 aa11.26□□□□□ -0.61
SCARB2-209ENST00000638409 ATP1B4Q9UN42 357 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-209ENST00000638409 CFAP43Q8NDM7 1665 aa11.26□□□□□ -0.61
SCARB2-209ENST00000638409 ABCA9Q8IUA7 1624 aa11.25□□□□□ -0.61
SCARB2-209ENST00000638409 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
SCARB2-209ENST00000638409 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
SCARB2-209ENST00000638409 TROQ12816 1431 aaPredicted RBP11.24□□□□□ -0.61
SCARB2-209ENST00000638409 IVNS1ABPQ9Y6Y0 642 aa11.24□□□□□ -0.61
SCARB2-209ENST00000638409 DPYSL4O14531 572 aa11.24□□□□□ -0.61
SCARB2-209ENST00000638409 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
SCARB2-209ENST00000638409 MAGI3Q5TCQ9 1506 aa11.23□□□□□ -0.61
SCARB2-209ENST00000638409 ACIN1Q9UKV3 1341 aaKnown RBP11.23□□□□□ -0.61
SCARB2-209ENST00000638409 TIAM1Q13009 1591 aa11.23□□□□□ -0.61
SCARB2-209ENST00000638409 PPP1R15AO75807 674 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-209ENST00000638409 BRD1O95696 1058 aa11.22□□□□□ -0.61
SCARB2-209ENST00000638409 SNRKQ9NRH2 765 aa11.22□□□□□ -0.61
SCARB2-209ENST00000638409 PPRC1Q5VV67 1664 aaKnown RBP11.22□□□□□ -0.61
SCARB2-209ENST00000638409 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
SCARB2-209ENST00000638409 IGSF5Q9NSI5 407 aa11.22□□□□□ -0.61
SCARB2-209ENST00000638409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
SCARB2-209ENST00000638409 NUTM2FA1L443 756 aa11.21□□□□□ -0.61
SCARB2-209ENST00000638409 KIF14Q15058 1648 aa11.21□□□□□ -0.62
SCARB2-209ENST00000638409 KCNA1Q09470 495 aa11.21□□□□□ -0.62
SCARB2-209ENST00000638409 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.62
SCARB2-209ENST00000638409 CD109Q6YHK3 1445 aa11.2□□□□□ -0.62
SCARB2-209ENST00000638409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-209ENST00000638409 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
SCARB2-209ENST00000638409 PSEN1P49768 467 aa11.19□□□□□ -0.62
SCARB2-209ENST00000638409 SH3D19Q5HYK7 790 aa11.19□□□□□ -0.62
SCARB2-209ENST00000638409 CALR3Q96L12 384 aaKnown RBP11.19□□□□□ -0.62
SCARB2-209ENST00000638409 TEX14Q8IWB6 1497 aa11.19□□□□□ -0.62
SCARB2-209ENST00000638409 POM121CA8CG34 1229 aa11.19□□□□□ -0.62
SCARB2-209ENST00000638409 TTC37Q6PGP7 1564 aa11.18□□□□□ -0.62
SCARB2-209ENST00000638409 CWC22Q9HCG8 908 aaKnown RBP11.18□□□□□ -0.62
SCARB2-209ENST00000638409 ARAP3Q8WWN8 1544 aa11.18□□□□□ -0.62
SCARB2-209ENST00000638409 RFX1P22670 979 aa11.18□□□□□ -0.62
SCARB2-209ENST00000638409 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
SCARB2-209ENST00000638409 TSPOAP1O95153 1857 aa11.18□□□□□ -0.62
SCARB2-209ENST00000638409 NLRP6P59044 892 aa11.17□□□□□ -0.62
SCARB2-209ENST00000638409 CCDC125Q86Z20 511 aa11.17□□□□□ -0.62
SCARB2-209ENST00000638409 SND1Q7KZF4 910 aaKnown RBP eCLIP11.17□□□□□ -0.62
SCARB2-209ENST00000638409 POLR3EQ9NVU0 708 aa11.17□□□□□ -0.62
SCARB2-209ENST00000638409 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
SCARB2-209ENST00000638409 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
SCARB2-209ENST00000638409 PLCH2O75038 1416 aa11.16□□□□□ -0.62
SCARB2-209ENST00000638409 GDPD2Q9HCC8 539 aa11.16□□□□□ -0.62
SCARB2-209ENST00000638409 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
SCARB2-209ENST00000638409 MYO5CQ9NQX4 1742 aa11.16□□□□□ -0.62
SCARB2-209ENST00000638409 KIAA1522Q9P206 1035 aaPredicted RBP11.16□□□□□ -0.62
SCARB2-209ENST00000638409 GLMNQ92990 594 aa11.15□□□□□ -0.62
SCARB2-209ENST00000638409 NEO1Q92859 1461 aa11.15□□□□□ -0.62
SCARB2-209ENST00000638409 CFAP74Q9C0B2 1584 aa11.15□□□□□ -0.62
SCARB2-209ENST00000638409 CABP2Q9NPB3 220 aa11.15□□□□□ -0.63
SCARB2-209ENST00000638409 SUPT6HQ7KZ85 1726 aaKnown RBP11.14□□□□□ -0.63
SCARB2-209ENST00000638409 GNPATO15228 680 aa11.13□□□□□ -0.63
SCARB2-209ENST00000638409 SMARCA5O60264 1052 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-209ENST00000638409 FBXO31Q5XUX0 539 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-209ENST00000638409 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
SCARB2-209ENST00000638409 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
SCARB2-209ENST00000638409 SPDYE5A6NIY4 337 aa11.13□□□□□ -0.63
SCARB2-209ENST00000638409 BRD2P25440 801 aaKnown RBP11.13□□□□□ -0.63
SCARB2-209ENST00000638409 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
SCARB2-209ENST00000638409 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
SCARB2-209ENST00000638409 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-209ENST00000638409 GPATCH8Q9UKJ3 1502 aaKnown RBP11.12□□□□□ -0.63
SCARB2-209ENST00000638409 GRXCR2A6NFK2 248 aa11.11□□□□□ -0.63
SCARB2-209ENST00000638409 PDIA6Q15084 440 aa11.11□□□□□ -0.63
SCARB2-209ENST00000638409 FANCAO15360 1455 aa11.11□□□□□ -0.63
SCARB2-209ENST00000638409 NCOA2Q15596 1464 aa11.11□□□□□ -0.63
SCARB2-209ENST00000638409 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
SCARB2-209ENST00000638409 SKIV2LQ15477 1246 aaKnown RBP11.1□□□□□ -0.63
SCARB2-209ENST00000638409 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-209ENST00000638409 ITSN2Q9NZM3 1697 aa11.1□□□□□ -0.63
SCARB2-209ENST00000638409 KDM6BO15054 1643 aa11.09□□□□□ -0.63
SCARB2-209ENST00000638409 EFCAB2Q5VUJ9 269 aa11.09□□□□□ -0.63
SCARB2-209ENST00000638409 AKNAQ7Z591 1439 aa11.09□□□□□ -0.63
SCARB2-209ENST00000638409 PBXIP1Q96AQ6 731 aa11.09□□□□□ -0.63
SCARB2-209ENST00000638409 PCGF6Q9BYE7 350 aa11.09□□□□□ -0.63
SCARB2-209ENST00000638409 CCNB3Q8WWL7 1395 aa11.09□□□□□ -0.63
SCARB2-209ENST00000638409 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
SCARB2-209ENST00000638409 COL17A1Q9UMD9 1497 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-209ENST00000638409 DSG3P32926 999 aa11.07□□□□□ -0.64
SCARB2-209ENST00000638409 MRRFQ96E11 262 aaKnown RBP11.07□□□□□ -0.64
SCARB2-209ENST00000638409 PDE4CQ08493 712 aa11.06□□□□□ -0.64
SCARB2-209ENST00000638409 PPP1R15BQ5SWA1 713 aa11.06□□□□□ -0.64
SCARB2-209ENST00000638409 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
SCARB2-209ENST00000638409 ADGRL1O94910 1474 aa11.05□□□□□ -0.64
SCARB2-209ENST00000638409 SAMD9LQ8IVG5 1584 aa11.05□□□□□ -0.64
SCARB2-209ENST00000638409 MIA2Q96PC5 1412 aa11.05□□□□□ -0.64
SCARB2-209ENST00000638409 KIAA1107Q9UPP5 1409 aa11.05□□□□□ -0.64
SCARB2-209ENST00000638409 USTQ9Y2C2 406 aa11.05□□□□□ -0.64
SCARB2-209ENST00000638409 ABCC1P33527 1531 aa11.04□□□□□ -0.64
SCARB2-209ENST00000638409 RICTORQ6R327 1708 aa11.04□□□□□ -0.64
SCARB2-209ENST00000638409 MYOM3Q5VTT5 1437 aa11.04□□□□□ -0.64
SCARB2-209ENST00000638409 PLEKHH2Q8IVE3 1493 aa11.04□□□□□ -0.64
SCARB2-209ENST00000638409 RBM47A0AV96 593 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms