RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 HCSTQ9UBK5 93 aa10.32□□□□□ -0.76
SCARB2-206ENST00000638175 ARHGEF11O15085 1522 aa10.32□□□□□ -0.76
SCARB2-206ENST00000638175 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
SCARB2-206ENST00000638175 SPDYE16A6NNV3 312 aaPredicted RBP10.31□□□□□ -0.76
SCARB2-206ENST00000638175 KIAA0586Q9BVV6 1533 aa10.3□□□□□ -0.76
SCARB2-206ENST00000638175 DPYSL4O14531 572 aa10.3□□□□□ -0.76
SCARB2-206ENST00000638175 PTPREP23469 700 aa10.3□□□□□ -0.76
SCARB2-206ENST00000638175 ZDHHC16Q969W1 377 aa10.3□□□□□ -0.76
SCARB2-206ENST00000638175 KCTD12Q96CX2 325 aaKnown RBP10.3□□□□□ -0.76
SCARB2-206ENST00000638175 SLC4A5Q9BY07 1137 aa10.29□□□□□ -0.76
SCARB2-206ENST00000638175 SMYD5Q6GMV2 418 aa10.28□□□□□ -0.76
SCARB2-206ENST00000638175 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
SCARB2-206ENST00000638175 PCDHGA10Q9Y5H3 936 aa10.28□□□□□ -0.76
SCARB2-206ENST00000638175 STAC3Q96MF2 364 aa10.27□□□□□ -0.77
SCARB2-206ENST00000638175 BHMG1C9JSJ3 638 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-206ENST00000638175 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
SCARB2-206ENST00000638175 UGGT2Q9NYU1 1516 aa10.23□□□□□ -0.77
SCARB2-206ENST00000638175 MLLT3P42568 568 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-206ENST00000638175 GOLGA3Q08378 1498 aa10.23□□□□□ -0.77
SCARB2-206ENST00000638175 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
SCARB2-206ENST00000638175 ERCC6L2Q5T890 1561 aa10.22□□□□□ -0.77
SCARB2-206ENST00000638175 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
SCARB2-206ENST00000638175 COL9A1P20849 921 aa10.21□□□□□ -0.77
SCARB2-206ENST00000638175 ZC3H15Q8WU90 426 aaKnown RBP10.21□□□□□ -0.77
SCARB2-206ENST00000638175 PHF14O94880 888 aa10.2□□□□□ -0.78
SCARB2-206ENST00000638175 PRG4Q92954 1404 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-206ENST00000638175 SAMD9Q5K651 1589 aa10.19□□□□□ -0.78
SCARB2-206ENST00000638175 PTPN5P54829 565 aa10.19□□□□□ -0.78
SCARB2-206ENST00000638175 TYW1BQ6NUM6 668 aa10.19□□□□□ -0.78
SCARB2-206ENST00000638175 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
SCARB2-206ENST00000638175 PPP1R3GB7ZBB8 358 aa10.18□□□□□ -0.78
SCARB2-206ENST00000638175 PROX2Q3B8N5 592 aa10.18□□□□□ -0.78
SCARB2-206ENST00000638175 FAM9AQ8IZU1 332 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-206ENST00000638175 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
SCARB2-206ENST00000638175 EFCAB5A4FU69 1503 aa10.17□□□□□ -0.78
SCARB2-206ENST00000638175 DISP1Q96F81 1524 aa10.17□□□□□ -0.78
SCARB2-206ENST00000638175 MRPL50Q8N5N7 158 aaKnown RBP10.17□□□□□ -0.78
SCARB2-206ENST00000638175 THSD4Q6ZMP0 1018 aa10.16□□□□□ -0.78
SCARB2-206ENST00000638175 GOLGA8CPA6NN73 597 aa10.14□□□□□ -0.79
SCARB2-206ENST00000638175 ZMYND10O75800 440 aa10.14□□□□□ -0.79
SCARB2-206ENST00000638175 RBM26Q5T8P6 1007 aaKnown RBP10.14□□□□□ -0.79
SCARB2-206ENST00000638175 DDX12PQ92771 950 aa10.14□□□□□ -0.79
SCARB2-206ENST00000638175 WNT2BQ93097 391 aa10.14□□□□□ -0.79
SCARB2-206ENST00000638175 EPAS1Q99814 870 aa10.14□□□□□ -0.79
SCARB2-206ENST00000638175 NBPF3Q9H094 633 aa10.14□□□□□ -0.79
SCARB2-206ENST00000638175 C6orf132Q5T0Z8 1188 aa10.13□□□□□ -0.79
SCARB2-206ENST00000638175 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
SCARB2-206ENST00000638175 ADCY10Q96PN6 1610 aa10.12□□□□□ -0.79
SCARB2-206ENST00000638175 RBM33Q96EV2 1170 aaKnown RBP10.12□□□□□ -0.79
SCARB2-206ENST00000638175 TNIKQ9UKE5 1360 aa10.12□□□□□ -0.79
SCARB2-206ENST00000638175 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
SCARB2-206ENST00000638175 GPR37O15354 613 aa10.1□□□□□ -0.79
SCARB2-206ENST00000638175 OSBPP22059 807 aa10.1□□□□□ -0.79
SCARB2-206ENST00000638175 BARGINQ6ZT62 677 aa10.1□□□□□ -0.79
SCARB2-206ENST00000638175 CYB5RLQ6IPT4 315 aa10.09□□□□□ -0.79
SCARB2-206ENST00000638175 KIAA1468Q9P260 1216 aa10.09□□□□□ -0.79
SCARB2-206ENST00000638175 PTPRGP23470 1445 aa10.08□□□□□ -0.8
SCARB2-206ENST00000638175 ABCC2Q92887 1545 aa10.08□□□□□ -0.8
SCARB2-206ENST00000638175 GRXCR2A6NFK2 248 aa10.08□□□□□ -0.8
SCARB2-206ENST00000638175 UHRF1BP1LA0JNW5 1464 aa10.08□□□□□ -0.8
SCARB2-206ENST00000638175 ABCA8O94911 1581 aa10.08□□□□□ -0.8
SCARB2-206ENST00000638175 RAPGEF6Q8TEU7 1601 aa10.07□□□□□ -0.8
SCARB2-206ENST00000638175 UBTFP17480 764 aaKnown RBP10.07□□□□□ -0.8
SCARB2-206ENST00000638175 ZCCHC11Q5TAX3 1644 aaKnown RBP10.06□□□□□ -0.8
SCARB2-206ENST00000638175 MAPKBP1O60336 1514 aa10.06□□□□□ -0.8
SCARB2-206ENST00000638175 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
SCARB2-206ENST00000638175 SLC24A3Q9HC58 644 aa10.05□□□□□ -0.8
SCARB2-206ENST00000638175 UACAQ9BZF9 1416 aa10.05□□□□□ -0.8
SCARB2-206ENST00000638175 ARHGAP35Q9NRY4 1499 aa10.04□□□□□ -0.8
SCARB2-206ENST00000638175 TRIM6-TRIM34B2RNG4 842 aa10.04□□□□□ -0.8
SCARB2-206ENST00000638175 ONECUT3O60422 494 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-206ENST00000638175 PRIM1P49642 420 aaKnown RBP10.04□□□□□ -0.8
SCARB2-206ENST00000638175 BCAMP50895 628 aa10.04□□□□□ -0.8
SCARB2-206ENST00000638175 EN1Q05925 392 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-206ENST00000638175 LAPTM4BQ86VI4 370 aa10.04□□□□□ -0.8
SCARB2-206ENST00000638175 ANKK1Q8NFD2 765 aa10.04□□□□□ -0.8
SCARB2-206ENST00000638175 SEPT9Q9UHD8 586 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-206ENST00000638175 KIF13AQ9H1H9 1805 aa10.04□□□□□ -0.8
SCARB2-206ENST00000638175 ZFRQ96KR1 1074 aaKnown RBP10.03□□□□□ -0.8
SCARB2-206ENST00000638175 HECW1Q76N89 1606 aa10.03□□□□□ -0.8
SCARB2-206ENST00000638175 FHOD3Q2V2M9 1422 aa10.02□□□□□ -0.81
SCARB2-206ENST00000638175 MAP3K7O43318 606 aa10.02□□□□□ -0.81
SCARB2-206ENST00000638175 KDM5BQ9UGL1 1544 aa10.02□□□□□ -0.81
SCARB2-206ENST00000638175 FMN1Q68DA7 1419 aa10.01□□□□□ -0.81
SCARB2-206ENST00000638175 PLB1Q6P1J6 1458 aa10.01□□□□□ -0.81
SCARB2-206ENST00000638175 CLIP1P30622 1438 aa10□□□□□ -0.81
SCARB2-206ENST00000638175 LRRIQ1Q96JM4 1722 aa10□□□□□ -0.81
SCARB2-206ENST00000638175 SOWAHBA6NEL2 793 aa10□□□□□ -0.81
SCARB2-206ENST00000638175 IFFO2Q5TF58 517 aa10□□□□□ -0.81
SCARB2-206ENST00000638175 TSKSQ9UJT2 592 aa10□□□□□ -0.81
SCARB2-206ENST00000638175 CEP162Q5TB80 1403 aa9.99□□□□□ -0.81
SCARB2-206ENST00000638175 PCF11O94913 1555 aaKnown RBP9.98□□□□□ -0.81
SCARB2-206ENST00000638175 DIP2BQ9P265 1576 aa9.98□□□□□ -0.81
SCARB2-206ENST00000638175 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
SCARB2-206ENST00000638175 NUTM2FA1L443 756 aa9.97□□□□□ -0.81
SCARB2-206ENST00000638175 FCHSD2O94868 740 aa9.97□□□□□ -0.81
SCARB2-206ENST00000638175 FAM98CQ17RN3 349 aaKnown RBP9.97□□□□□ -0.81
SCARB2-206ENST00000638175 AK7Q96M32 723 aa9.97□□□□□ -0.81
SCARB2-206ENST00000638175 WBP1LQ9NX94 342 aa9.97□□□□□ -0.81
SCARB2-206ENST00000638175 NUP153P49790 1475 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms