RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 NEURL4Q96JN8 1562 aa25.56■■□□□ 1.68
CLN5-219ENST00000637537 IQGAP1P46940 1657 aa25.55■■□□□ 1.68
CLN5-219ENST00000637537 NOS1P29475 1434 aa25.54■■□□□ 1.68
CLN5-219ENST00000637537 ADGRB3O60242 1522 aa25.54■■□□□ 1.68
CLN5-219ENST00000637537 SCAF11Q99590 1463 aaKnown RBP25.53■■□□□ 1.68
CLN5-219ENST00000637537 MYOM2P54296 1465 aa25.53■■□□□ 1.68
CLN5-219ENST00000637537 IFT172Q9UG01 1749 aa25.52■■□□□ 1.68
CLN5-219ENST00000637537 NUTM2DQ5VT03 806 aaPredicted RBP25.52■■□□□ 1.68
CLN5-219ENST00000637537 ZMYM4Q5VZL5 1548 aa25.51■■□□□ 1.67
CLN5-219ENST00000637537 PANK3Q9H999 370 aa25.49■■□□□ 1.67
CLN5-219ENST00000637537 PER1O15534 1290 aaPredicted RBP25.48■■□□□ 1.67
CLN5-219ENST00000637537 SYNMO15061 1565 aa25.48■■□□□ 1.67
CLN5-219ENST00000637537 KIF13AQ9H1H9 1805 aa25.47■■□□□ 1.67
CLN5-219ENST00000637537 KIAA1210Q9ULL0 1709 aa25.46■■□□□ 1.67
CLN5-219ENST00000637537 IDI1Q13907 227 aa25.46■■□□□ 1.67
CLN5-219ENST00000637537 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.67
CLN5-219ENST00000637537 NRXN1Q9ULB1 1477 aa25.44■■□□□ 1.66
CLN5-219ENST00000637537 CC2D1BQ5T0F9 858 aaKnown RBP25.43■■□□□ 1.66
CLN5-219ENST00000637537 FBXO31Q5XUX0 539 aaPredicted RBP25.43■■□□□ 1.66
CLN5-219ENST00000637537 PPLO60437 1756 aa25.43■■□□□ 1.66
CLN5-219ENST00000637537 SENP3-EIF4A1A0A087X0R7 540 aa25.43■■□□□ 1.66
CLN5-219ENST00000637537 TMC1Q8TDI8 760 aa25.43■■□□□ 1.66
CLN5-219ENST00000637537 ARHGAP31Q2M1Z3 1444 aa25.43■■□□□ 1.66
CLN5-219ENST00000637537 ZC3H13Q5T200 1668 aaKnown RBP25.43■■□□□ 1.66
CLN5-219ENST00000637537 MLECQ14165 292 aa25.42■■□□□ 1.66
CLN5-219ENST00000637537 EIF3AQ14152 1382 aaKnown RBP25.42■■□□□ 1.66
CLN5-219ENST00000637537 TMEM132EQ6IEE7 984 aa25.41■■□□□ 1.66
CLN5-219ENST00000637537 PIK3C2BO00750 1634 aa25.41■■□□□ 1.66
CLN5-219ENST00000637537 RALBP1Q15311 655 aa25.4■■□□□ 1.66
CLN5-219ENST00000637537 MYBBP1AQ9BQG0 1328 aaKnown RBP25.4■■□□□ 1.66
CLN5-219ENST00000637537 KTN1Q86UP2 1357 aaKnown RBP25.39■■□□□ 1.66
CLN5-219ENST00000637537 PIK3C2GO75747 1445 aa25.39■■□□□ 1.66
CLN5-219ENST00000637537 TRAK1Q9UPV9 953 aa25.38■■□□□ 1.65
CLN5-219ENST00000637537 FKBP8Q14318 412 aa25.37■■□□□ 1.65
CLN5-219ENST00000637537 PNISRQ8TF01 805 aaKnown RBP25.37■■□□□ 1.65
CLN5-219ENST00000637537 BCANQ96GW7 911 aa25.36■■□□□ 1.65
CLN5-219ENST00000637537 C14orf93Q9H972 538 aaKnown RBP25.36■■□□□ 1.65
CLN5-219ENST00000637537 PARD3Q8TEW0 1356 aa25.36■■□□□ 1.65
CLN5-219ENST00000637537 RPGRIP1LQ68CZ1 1315 aa25.36■■□□□ 1.65
CLN5-219ENST00000637537 PREX1Q8TCU6 1659 aa25.35■■□□□ 1.65
CLN5-219ENST00000637537 RBM19Q9Y4C8 960 aaKnown RBP25.35■■□□□ 1.65
CLN5-219ENST00000637537 SLC52A1Q9NWF4 448 aa25.34■■□□□ 1.65
CLN5-219ENST00000637537 CDCA8Q53HL2 280 aa25.33■■□□□ 1.65
CLN5-219ENST00000637537 MYO5BQ9ULV0 1848 aa25.32■■□□□ 1.64
CLN5-219ENST00000637537 NEXMIFQ5QGS0 1516 aa25.32■■□□□ 1.64
CLN5-219ENST00000637537 ZBED9Q6R2W3 1325 aa25.32■■□□□ 1.64
CLN5-219ENST00000637537 VGFO15240 615 aaPredicted RBP25.31■■□□□ 1.64
CLN5-219ENST00000637537 BRD4O60885 1362 aaPredicted RBP25.31■■□□□ 1.64
CLN5-219ENST00000637537 ERVK-7P63135 1459 aa25.3■■□□□ 1.64
CLN5-219ENST00000637537 ADGRB1O14514 1584 aa25.29■■□□□ 1.64
CLN5-219ENST00000637537 NLRP13Q86W25 1043 aa25.29■■□□□ 1.64
CLN5-219ENST00000637537 REREQ9P2R6 1566 aa25.29■■□□□ 1.64
CLN5-219ENST00000637537 SETBP1Q9Y6X0 1596 aa25.29■■□□□ 1.64
CLN5-219ENST00000637537 AGLP35573 1532 aa25.28■■□□□ 1.64
CLN5-219ENST00000637537 CENPJQ9HC77 1338 aaPredicted RBP25.28■■□□□ 1.64
CLN5-219ENST00000637537 CLTCQ00610 1675 aaKnown RBP25.28■■□□□ 1.64
CLN5-219ENST00000637537 KNSTRNQ9Y448 316 aa25.28■■□□□ 1.64
CLN5-219ENST00000637537 MYOM1P52179 1685 aa25.26■■□□□ 1.63
CLN5-219ENST00000637537 KDM5AP29375 1690 aaKnown RBP25.25■■□□□ 1.63
CLN5-219ENST00000637537 TMEM131LA2VDJ0 1609 aa25.25■■□□□ 1.63
CLN5-219ENST00000637537 NEFLP07196 543 aa25.25■■□□□ 1.63
CLN5-219ENST00000637537 ARHGEF40Q8TER5 1519 aa25.24■■□□□ 1.63
CLN5-219ENST00000637537 STAG3Q9UJ98 1225 aa25.24■■□□□ 1.63
CLN5-219ENST00000637537 AMER1Q5JTC6 1135 aaPredicted RBP25.22■■□□□ 1.63
CLN5-219ENST00000637537 MYO3AQ8NEV4 1616 aa25.22■■□□□ 1.63
CLN5-219ENST00000637537 LRPPRCP42704 1394 aaKnown RBP25.21■■□□□ 1.63
CLN5-219ENST00000637537 PPP6R1Q9UPN7 881 aa25.21■■□□□ 1.63
CLN5-219ENST00000637537 IRX6P78412 446 aaPredicted RBP25.2■■□□□ 1.62
CLN5-219ENST00000637537 STK26Q9P289 416 aa25.2■■□□□ 1.62
CLN5-219ENST00000637537 SAFB2Q14151 953 aaKnown RBP eCLIP25.19■■□□□ 1.62
CLN5-219ENST00000637537 SBNO2Q9Y2G9 1366 aa25.18■■□□□ 1.62
CLN5-219ENST00000637537 QRICH2Q9H0J4 1663 aa25.18■■□□□ 1.62
CLN5-219ENST00000637537 SLC24A1O60721 1099 aa25.18■■□□□ 1.62
CLN5-219ENST00000637537 CARD14Q9BXL6 1004 aa25.16■■□□□ 1.62
CLN5-219ENST00000637537 ESF1Q9H501 851 aaKnown RBP25.16■■□□□ 1.62
CLN5-219ENST00000637537 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
CLN5-219ENST00000637537 ZFYVE9O95405 1425 aa25.14■■□□□ 1.62
CLN5-219ENST00000637537 ASXL1Q8IXJ9 1541 aa25.14■■□□□ 1.61
CLN5-219ENST00000637537 PPP2R1AP30153 589 aa25.13■■□□□ 1.61
CLN5-219ENST00000637537 SLC12A5Q9H2X9 1139 aa25.13■■□□□ 1.61
CLN5-219ENST00000637537 ZMYM3Q14202 1370 aa25.12■■□□□ 1.61
CLN5-219ENST00000637537 ARHGEF28Q8N1W1 1705 aaKnown RBP25.11■■□□□ 1.61
CLN5-219ENST00000637537 MSH5O43196 834 aa25.11■■□□□ 1.61
CLN5-219ENST00000637537 SPATA31D1Q6ZQQ2 1576 aa25.11■■□□□ 1.61
CLN5-219ENST00000637537 A2ML1A8K2U0 1454 aa25.08■■□□□ 1.61
CLN5-219ENST00000637537 CABP2Q9NPB3 220 aa25.06■■□□□ 1.6
CLN5-219ENST00000637537 TRHP20396 242 aaPredicted RBP25.04■■□□□ 1.6
CLN5-219ENST00000637537 TULP4Q9NRJ4 1543 aa25.03■■□□□ 1.6
CLN5-219ENST00000637537 EVC2Q86UK5 1308 aa25.03■■□□□ 1.6
CLN5-219ENST00000637537 PRAM1Q96QH2 718 aa25.03■■□□□ 1.6
CLN5-219ENST00000637537 FANCIQ9NVI1 1328 aa25.03■■□□□ 1.6
CLN5-219ENST00000637537 ALKQ9UM73 1620 aa25.03■■□□□ 1.6
CLN5-219ENST00000637537 ADAMTS8Q9UP79 889 aa25.03■■□□□ 1.6
CLN5-219ENST00000637537 NUDCQ9Y266 331 aa25.03■■□□□ 1.6
CLN5-219ENST00000637537 SMG6Q86US8 1419 aaKnown RBP25.03■■□□□ 1.6
CLN5-219ENST00000637537 NPC1L1Q9UHC9 1359 aa25.02■■□□□ 1.6
CLN5-219ENST00000637537 RIMS2Q9UQ26 1411 aa25.02■■□□□ 1.6
CLN5-219ENST00000637537 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
CLN5-219ENST00000637537 NSD3Q9BZ95 1437 aa25.01■■□□□ 1.59
CLN5-219ENST00000637537 MINK1Q8N4C8 1332 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms