RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 ARID4BQ4LE39 1312 aaPredicted RBP30■■■□□ 2.39
CHRNA7-228ENST00000637519 IQGAP1P46940 1657 aa30■■■□□ 2.39
CHRNA7-228ENST00000637519 CLTCQ00610 1675 aaKnown RBP30■■■□□ 2.39
CHRNA7-228ENST00000637519 IDI1Q13907 227 aa29.99■■■□□ 2.39
CHRNA7-228ENST00000637519 DISP3Q9P2K9 1392 aa29.98■■■□□ 2.39
CHRNA7-228ENST00000637519 PPLO60437 1756 aa29.97■■■□□ 2.39
CHRNA7-228ENST00000637519 CNGB1Q14028 1251 aaPredicted RBP29.97■■■□□ 2.39
CHRNA7-228ENST00000637519 NUTM2DQ5VT03 806 aaPredicted RBP29.97■■■□□ 2.39
CHRNA7-228ENST00000637519 NRXN1Q9ULB1 1477 aa29.97■■■□□ 2.39
CHRNA7-228ENST00000637519 TRHP20396 242 aaPredicted RBP29.95■■■□□ 2.39
CHRNA7-228ENST00000637519 KIAA1210Q9ULL0 1709 aa29.94■■■□□ 2.38
CHRNA7-228ENST00000637519 SCAF11Q99590 1463 aaKnown RBP29.94■■■□□ 2.38
CHRNA7-228ENST00000637519 PRKRIP1Q9H875 184 aaPredicted RBP29.94■■■□□ 2.38
CHRNA7-228ENST00000637519 ERVK-7P63135 1459 aa29.93■■■□□ 2.38
CHRNA7-228ENST00000637519 SCAF1Q9H7N4 1312 aaKnown RBP29.91■■■□□ 2.38
CHRNA7-228ENST00000637519 PIK3C2GO75747 1445 aa29.9■■■□□ 2.38
CHRNA7-228ENST00000637519 NEXMIFQ5QGS0 1516 aa29.89■■■□□ 2.38
CHRNA7-228ENST00000637519 CCDC184Q52MB2 194 aa29.88■■■□□ 2.37
CHRNA7-228ENST00000637519 SLC52A1Q9NWF4 448 aa29.88■■■□□ 2.37
CHRNA7-228ENST00000637519 SENP3Q9H4L4 574 aaPredicted RBP29.87■■■□□ 2.37
CHRNA7-228ENST00000637519 MYO5BQ9ULV0 1848 aa29.87■■■□□ 2.37
CHRNA7-228ENST00000637519 PPP6R1Q9UPN7 881 aa29.86■■■□□ 2.37
CHRNA7-228ENST00000637519 RPGRIP1LQ68CZ1 1315 aa29.85■■■□□ 2.37
CHRNA7-228ENST00000637519 TMEM131LA2VDJ0 1609 aa29.84■■■□□ 2.37
CHRNA7-228ENST00000637519 TMF1P82094 1093 aa29.84■■■□□ 2.37
CHRNA7-228ENST00000637519 TMEM132EQ6IEE7 984 aa29.8■■■□□ 2.36
CHRNA7-228ENST00000637519 EIF3AQ14152 1382 aaKnown RBP29.79■■■□□ 2.36
CHRNA7-228ENST00000637519 SPATA31D1Q6ZQQ2 1576 aa29.79■■■□□ 2.36
CHRNA7-228ENST00000637519 C14orf93Q9H972 538 aaKnown RBP29.79■■■□□ 2.36
CHRNA7-228ENST00000637519 ESF1Q9H501 851 aaKnown RBP29.78■■■□□ 2.36
CHRNA7-228ENST00000637519 ADGRB1O14514 1584 aa29.77■■■□□ 2.36
CHRNA7-228ENST00000637519 SETBP1Q9Y6X0 1596 aa29.76■■■□□ 2.35
CHRNA7-228ENST00000637519 ZMYM3Q14202 1370 aa29.76■■■□□ 2.35
CHRNA7-228ENST00000637519 VGFO15240 615 aaPredicted RBP29.76■■■□□ 2.35
CHRNA7-228ENST00000637519 TRAK1Q9UPV9 953 aa29.74■■■□□ 2.35
CHRNA7-228ENST00000637519 STAG3Q9UJ98 1225 aa29.73■■■□□ 2.35
CHRNA7-228ENST00000637519 GTF3C3Q9Y5Q9 886 aa29.73■■■□□ 2.35
CHRNA7-228ENST00000637519 MRS2Q9HD23 443 aa29.72■■■□□ 2.35
CHRNA7-228ENST00000637519 PANK3Q9H999 370 aa29.68■■■□□ 2.34
CHRNA7-228ENST00000637519 A2ML1A8K2U0 1454 aa29.67■■■□□ 2.34
CHRNA7-228ENST00000637519 ZFYVE9O95405 1425 aa29.67■■■□□ 2.34
CHRNA7-228ENST00000637519 MYO3AQ8NEV4 1616 aa29.66■■■□□ 2.34
CHRNA7-228ENST00000637519 PER1O15534 1290 aaPredicted RBP29.65■■■□□ 2.34
CHRNA7-228ENST00000637519 DNAJC5Q9H3Z4 198 aa29.65■■■□□ 2.34
CHRNA7-228ENST00000637519 ASXL1Q8IXJ9 1541 aa29.64■■■□□ 2.34
CHRNA7-228ENST00000637519 CENPJQ9HC77 1338 aaPredicted RBP29.63■■■□□ 2.33
CHRNA7-228ENST00000637519 FAM9BQ8IZU0 186 aa29.62■■■□□ 2.33
CHRNA7-228ENST00000637519 MYOM1P52179 1685 aa29.61■■■□□ 2.33
CHRNA7-228ENST00000637519 QRICH2Q9H0J4 1663 aa29.6■■■□□ 2.33
CHRNA7-228ENST00000637519 KDM5AP29375 1690 aaKnown RBP29.59■■■□□ 2.33
CHRNA7-228ENST00000637519 CEBPAP49715 358 aaPredicted RBP29.59■■■□□ 2.33
CHRNA7-228ENST00000637519 CDCA8Q53HL2 280 aa29.59■■■□□ 2.33
CHRNA7-228ENST00000637519 TNRQ92752 1358 aa29.58■■■□□ 2.33
CHRNA7-228ENST00000637519 HNRNPUQ00839 825 aaKnown RBP eCLIP29.57■■■□□ 2.32
CHRNA7-228ENST00000637519 CC2D1BQ5T0F9 858 aaKnown RBP29.57■■■□□ 2.32
CHRNA7-228ENST00000637519 RIMS2Q9UQ26 1411 aa29.57■■■□□ 2.32
CHRNA7-228ENST00000637519 PLPPR3Q6T4P5 718 aa29.57■■■□□ 2.32
CHRNA7-228ENST00000637519 STK26Q9P289 416 aa29.57■■■□□ 2.32
CHRNA7-228ENST00000637519 ARHGEF28Q8N1W1 1705 aaKnown RBP29.57■■■□□ 2.32
CHRNA7-228ENST00000637519 KTN1Q86UP2 1357 aaKnown RBP29.55■■■□□ 2.32
CHRNA7-228ENST00000637519 SBNO2Q9Y2G9 1366 aa29.54■■■□□ 2.32
CHRNA7-228ENST00000637519 PARD3Q8TEW0 1356 aa29.53■■■□□ 2.32
CHRNA7-228ENST00000637519 SAFB2Q14151 953 aaKnown RBP eCLIP29.52■■■□□ 2.32
CHRNA7-228ENST00000637519 ALKQ9UM73 1620 aa29.52■■■□□ 2.32
CHRNA7-228ENST00000637519 RALBP1Q15311 655 aa29.52■■■□□ 2.32
CHRNA7-228ENST00000637519 MYBBP1AQ9BQG0 1328 aaKnown RBP29.52■■■□□ 2.32
CHRNA7-228ENST00000637519 FER1L4A9Z1Z3 1794 aa29.47■■■□□ 2.31
CHRNA7-228ENST00000637519 PTPRMP28827 1452 aa29.47■■■□□ 2.31
CHRNA7-228ENST00000637519 YTHDC2Q9H6S0 1430 aaKnown RBP29.46■■■□□ 2.31
CHRNA7-228ENST00000637519 C3P01024 1663 aa29.46■■■□□ 2.31
CHRNA7-228ENST00000637519 TMC1Q8TDI8 760 aa29.46■■■□□ 2.31
CHRNA7-228ENST00000637519 SLC24A1O60721 1099 aa29.44■■■□□ 2.3
CHRNA7-228ENST00000637519 KNSTRNQ9Y448 316 aa29.44■■■□□ 2.3
CHRNA7-228ENST00000637519 UBR1Q8IWV7 1749 aa29.44■■■□□ 2.3
CHRNA7-228ENST00000637519 TULP4Q9NRJ4 1543 aa29.44■■■□□ 2.3
CHRNA7-228ENST00000637519 NRXN3Q9Y4C0 1643 aa29.41■■■□□ 2.3
CHRNA7-228ENST00000637519 AMER1Q5JTC6 1135 aaPredicted RBP29.41■■■□□ 2.3
CHRNA7-228ENST00000637519 BRD4O60885 1362 aaPredicted RBP29.41■■■□□ 2.3
CHRNA7-228ENST00000637519 SETD1AO15047 1707 aaKnown RBP29.4■■■□□ 2.3
CHRNA7-228ENST00000637519 PRAM1Q96QH2 718 aa29.4■■■□□ 2.3
CHRNA7-228ENST00000637519 PNISRQ8TF01 805 aaKnown RBP29.39■■■□□ 2.3
CHRNA7-228ENST00000637519 TMEM2Q9UHN6 1383 aa29.38■■■□□ 2.29
CHRNA7-228ENST00000637519 NLRP13Q86W25 1043 aa29.38■■■□□ 2.29
CHRNA7-228ENST00000637519 SENP3-EIF4A1A0A087X0R7 540 aa29.37■■■□□ 2.29
CHRNA7-228ENST00000637519 CARD14Q9BXL6 1004 aa29.37■■■□□ 2.29
CHRNA7-228ENST00000637519 SLC12A5Q9H2X9 1139 aa29.36■■■□□ 2.29
CHRNA7-228ENST00000637519 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.36■■■□□ 2.29
CHRNA7-228ENST00000637519 MINK1Q8N4C8 1332 aaPredicted RBP29.36■■■□□ 2.29
CHRNA7-228ENST00000637519 CABP2Q9NPB3 220 aa29.35■■■□□ 2.29
CHRNA7-228ENST00000637519 EVC2Q86UK5 1308 aa29.35■■■□□ 2.29
CHRNA7-228ENST00000637519 POGKQ9P215 609 aa29.35■■■□□ 2.29
CHRNA7-228ENST00000637519 NLRP1Q9C000 1473 aa29.34■■■□□ 2.29
CHRNA7-228ENST00000637519 METP08581 1390 aa29.33■■■□□ 2.29
CHRNA7-228ENST00000637519 BCANQ96GW7 911 aa29.32■■■□□ 2.28
CHRNA7-228ENST00000637519 PLEKHH1Q9ULM0 1364 aa29.3■■■□□ 2.28
CHRNA7-228ENST00000637519 LTKP29376 864 aa29.29■■■□□ 2.28
CHRNA7-228ENST00000637519 WAPLQ7Z5K2 1190 aa29.29■■■□□ 2.28
CHRNA7-228ENST00000637519 LRPPRCP42704 1394 aaKnown RBP29.29■■■□□ 2.28
CHRNA7-228ENST00000637519 NSD3Q9BZ95 1437 aa29.27■■■□□ 2.28
CHRNA7-228ENST00000637519 SRPK2P78362 688 aaKnown RBP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms