RNA–Protein interactions for RNA: ENST00000637419.1

GSE1-216, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-216ENST00000637419 RNF17Q9BXT8 1623 aaKnown RBP26.11■■□□□ 1.77
GSE1-216ENST00000637419 ATP10AO60312 1499 aa26.1■■□□□ 1.77
GSE1-216ENST00000637419 SLFN5Q08AF3 891 aa26.1■■□□□ 1.77
GSE1-216ENST00000637419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.772e-6■■■■□ 20.7
GSE1-216ENST00000637419 GSE1Q14687 1217 aa26.08■■□□□ 1.77
GSE1-216ENST00000637419 DAXXQ9UER7 740 aaPredicted RBP26.07■■□□□ 1.76
GSE1-216ENST00000637419 BRPF3Q9ULD4 1205 aa26.07■■□□□ 1.76
GSE1-216ENST00000637419 PLXNC1O60486 1568 aa26.06■■□□□ 1.76
GSE1-216ENST00000637419 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.05■■□□□ 1.76
GSE1-216ENST00000637419 BCAR3O75815 825 aa26.05■■□□□ 1.76
GSE1-216ENST00000637419 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
GSE1-216ENST00000637419 APAF1O14727 1248 aa26.03■■□□□ 1.76
GSE1-216ENST00000637419 TRMT2AQ8IZ69 625 aaKnown RBP26.03■■□□□ 1.76
GSE1-216ENST00000637419 FRAT1Q92837 279 aaPredicted RBP26.03■■□□□ 1.76
GSE1-216ENST00000637419 MADDQ8WXG6 1647 aa26.02■■□□□ 1.76
GSE1-216ENST00000637419 IQGAP1P46940 1657 aa26.01■■□□□ 1.75
GSE1-216ENST00000637419 ASXL1Q8IXJ9 1541 aa26.01■■□□□ 1.75
GSE1-216ENST00000637419 DMRT2Q9Y5R5 561 aa26.01■■□□□ 1.75
GSE1-216ENST00000637419 PIK3C2GO75747 1445 aa25.99■■□□□ 1.75
GSE1-216ENST00000637419 SYNMO15061 1565 aa25.98■■□□□ 1.75
GSE1-216ENST00000637419 CLASP1Q7Z460 1538 aa25.97■■□□□ 1.75
GSE1-216ENST00000637419 FRAT2O75474 233 aaPredicted RBP25.97■■□□□ 1.75
GSE1-216ENST00000637419 IGHDP01880 384 aa25.97■■□□□ 1.75
GSE1-216ENST00000637419 SCAF11Q99590 1463 aaKnown RBP25.96■■□□□ 1.75
GSE1-216ENST00000637419 CDCA8Q53HL2 280 aa25.96■■□□□ 1.75
GSE1-216ENST00000637419 NKTRP30414 1462 aaKnown RBP25.95■■□□□ 1.75
GSE1-216ENST00000637419 MYOM1P52179 1685 aa25.94■■□□□ 1.74
GSE1-216ENST00000637419 EIF3AQ14152 1382 aaKnown RBP25.93■■□□□ 1.74
GSE1-216ENST00000637419 TRAPPC8Q9Y2L5 1435 aa25.91■■□□□ 1.74
GSE1-216ENST00000637419 USP19O94966 1318 aa25.89■■□□□ 1.74
GSE1-216ENST00000637419 E9PSI1 815 aa25.89■■□□□ 1.73
GSE1-216ENST00000637419 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.89■■□□□ 1.73
GSE1-216ENST00000637419 ABCC2Q92887 1545 aa25.88■■□□□ 1.73
GSE1-216ENST00000637419 NPC1L1Q9UHC9 1359 aa25.88■■□□□ 1.73
GSE1-216ENST00000637419 SPHKAPQ2M3C7 1700 aa25.88■■□□□ 1.73
GSE1-216ENST00000637419 SCAPERQ9BY12 1400 aa25.88■■□□□ 1.73
GSE1-216ENST00000637419 SEC24BO95487 1268 aa25.88■■□□□ 1.73
GSE1-216ENST00000637419 CARD14Q9BXL6 1004 aa25.88■■□□□ 1.73
GSE1-216ENST00000637419 PANK1Q8TE04 598 aa25.86■■□□□ 1.73
GSE1-216ENST00000637419 CLTCL1P53675 1640 aa25.85■■□□□ 1.73
GSE1-216ENST00000637419 TRPM2O94759 1503 aa25.85■■□□□ 1.73
GSE1-216ENST00000637419 EFCAB2Q5VUJ9 269 aa25.85■■□□□ 1.73
GSE1-216ENST00000637419 COG6Q9Y2V7 657 aa25.85■■□□□ 1.73
GSE1-216ENST00000637419 PLCH2O75038 1416 aa25.84■■□□□ 1.73
GSE1-216ENST00000637419 ERCC6L2Q5T890 1561 aa25.84■■□□□ 1.73
GSE1-216ENST00000637419 AFAP1Q8N556 730 aa25.84■■□□□ 1.73
GSE1-216ENST00000637419 CFAP70Q5T0N1 1121 aa25.83■■□□□ 1.73
GSE1-216ENST00000637419 CEP152O94986 1710 aa25.82■■□□□ 1.72
GSE1-216ENST00000637419 PTPRTO14522 1441 aa25.81■■□□□ 1.72
GSE1-216ENST00000637419 KDM5AP29375 1690 aaKnown RBP25.8■■□□□ 1.72
GSE1-216ENST00000637419 CLUAP1Q96AJ1 413 aa25.8■■□□□ 1.72
GSE1-216ENST00000637419 CENPJQ9HC77 1338 aaPredicted RBP25.8■■□□□ 1.72
GSE1-216ENST00000637419 PRKCSHP14314 528 aaPredicted RBP25.8■■□□□ 1.72
GSE1-216ENST00000637419 WWC1Q8IX03 1113 aa25.8■■□□□ 1.72
GSE1-216ENST00000637419 SPAG9O60271 1321 aaKnown RBP25.79■■□□□ 1.72
GSE1-216ENST00000637419 CGNL1Q0VF96 1302 aa25.79■■□□□ 1.72
GSE1-216ENST00000637419 ERVK-7P63135 1459 aa25.79■■□□□ 1.72
GSE1-216ENST00000637419 ABCC1P33527 1531 aa25.79■■□□□ 1.72
GSE1-216ENST00000637419 CANXP27824 592 aaKnown RBP25.79■■□□□ 1.72
GSE1-216ENST00000637419 PDE3AQ14432 1141 aa25.79■■□□□ 1.72
GSE1-216ENST00000637419 NEUROD2Q15784 382 aa25.78■■□□□ 1.72
GSE1-216ENST00000637419 RRP7AQ9Y3A4 280 aaKnown RBP25.76■■□□□ 1.71
GSE1-216ENST00000637419 ADGRF5Q8IZF2 1346 aa25.76■■□□□ 1.71
GSE1-216ENST00000637419 STAC3Q96MF2 364 aa25.76■■□□□ 1.71
GSE1-216ENST00000637419 TNNQ9UQP3 1299 aa25.75■■□□□ 1.71
GSE1-216ENST00000637419 VIRMAQ69YN4 1812 aaKnown RBP25.75■■□□□ 1.71
GSE1-216ENST00000637419 CHD1O14646 1710 aa25.74■■□□□ 1.71
GSE1-216ENST00000637419 TNNT2P45379 298 aaPredicted RBP25.74■■□□□ 1.71
GSE1-216ENST00000637419 SLKQ9H2G2 1235 aaPredicted RBP25.72■■□□□ 1.71
GSE1-216ENST00000637419 UGGT1Q9NYU2 1555 aa25.72■■□□□ 1.71
GSE1-216ENST00000637419 MAPK8IP3Q9UPT6 1336 aa25.71■■□□□ 1.71
GSE1-216ENST00000637419 POGKQ9P215 609 aa25.71■■□□□ 1.71
GSE1-216ENST00000637419 RLBP1P12271 317 aa25.7■■□□□ 1.7
GSE1-216ENST00000637419 PCDHB15Q9Y5E8 787 aa25.7■■□□□ 1.7
GSE1-216ENST00000637419 SHROOM2Q13796 1616 aa25.7■■□□□ 1.7
GSE1-216ENST00000637419 NLRP1Q9C000 1473 aa25.69■■□□□ 1.7
GSE1-216ENST00000637419 BCL2L13Q9BXK5 485 aa25.69■■□□□ 1.7
GSE1-216ENST00000637419 ZFYVE16Q7Z3T8 1539 aa25.69■■□□□ 1.7
GSE1-216ENST00000637419 RARSP54136 660 aaKnown RBP25.69■■□□□ 1.7
GSE1-216ENST00000637419 POLR3AO14802 1390 aaPredicted RBP25.68■■□□□ 1.7
GSE1-216ENST00000637419 NGEFQ8N5V2 710 aa25.68■■□□□ 1.7
GSE1-216ENST00000637419 ABCA6Q8N139 1617 aa25.67■■□□□ 1.7
GSE1-216ENST00000637419 KIF3BO15066 747 aa25.67■■□□□ 1.7
GSE1-216ENST00000637419 KIAA1210Q9ULL0 1709 aa25.66■■□□□ 1.7
GSE1-216ENST00000637419 ZCCHC11Q5TAX3 1644 aaKnown RBP25.66■■□□□ 1.7
GSE1-216ENST00000637419 TET3O43151 1660 aa25.65■■□□□ 1.7
GSE1-216ENST00000637419 NINLQ9Y2I6 1382 aa25.65■■□□□ 1.7
GSE1-216ENST00000637419 TCP11L2Q8N4U5 519 aa25.65■■□□□ 1.7
GSE1-216ENST00000637419 DEPDC5O75140 1603 aa25.64■■□□□ 1.7
GSE1-216ENST00000637419 RTEL1-TNFRSF6BF6WH68 1400 aa25.64■■□□□ 1.7
GSE1-216ENST00000637419 MAP3K4Q9Y6R4 1608 aa25.64■■□□□ 1.7
GSE1-216ENST00000637419 MORC1Q86VD1 984 aa25.63■■□□□ 1.69
GSE1-216ENST00000637419 BECN1Q14457 450 aa25.63■■□□□ 1.69
GSE1-216ENST00000637419 SLC12A5Q9H2X9 1139 aa25.62■■□□□ 1.69
GSE1-216ENST00000637419 PDZRN3Q9UPQ7 1066 aa25.62■■□□□ 1.69
GSE1-216ENST00000637419 NSD3Q9BZ95 1437 aa25.62■■□□□ 1.69
GSE1-216ENST00000637419 RUNDC1Q96C34 613 aa25.61■■□□□ 1.69
GSE1-216ENST00000637419 KANK1Q14678 1352 aa25.61■■□□□ 1.69
GSE1-216ENST00000637419 SHPRHQ149N8 1683 aa25.61■■□□□ 1.69
GSE1-216ENST00000637419 ANTXR1Q9H6X2 564 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms