RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 NBPF1Q3BBV0 1214 aa23.31■■□□□ 1.32
CHRNA7-227ENST00000637350 PPP6R1Q9UPN7 881 aa23.31■■□□□ 1.32
CHRNA7-227ENST00000637350 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
CHRNA7-227ENST00000637350 NEFLP07196 543 aa23.29■■□□□ 1.32
CHRNA7-227ENST00000637350 ADGRB3O60242 1522 aa23.28■■□□□ 1.32
CHRNA7-227ENST00000637350 MROH2AA6NES4 1674 aa23.28■■□□□ 1.32
CHRNA7-227ENST00000637350 SYNMO15061 1565 aa23.26■■□□□ 1.31
CHRNA7-227ENST00000637350 PIK3C2BO00750 1634 aa23.25■■□□□ 1.31
CHRNA7-227ENST00000637350 IFT172Q9UG01 1749 aa23.25■■□□□ 1.31
CHRNA7-227ENST00000637350 MYOM2P54296 1465 aa23.25■■□□□ 1.31
CHRNA7-227ENST00000637350 CHGAP10645 457 aaKnown RBP23.24■■□□□ 1.31
CHRNA7-227ENST00000637350 PREX1Q8TCU6 1659 aa23.23■■□□□ 1.31
CHRNA7-227ENST00000637350 TSHZ2Q9NRE2 1034 aa23.22■■□□□ 1.31
CHRNA7-227ENST00000637350 KIAA1210Q9ULL0 1709 aa23.21■■□□□ 1.31
CHRNA7-227ENST00000637350 SLC52A1Q9NWF4 448 aa23.2■■□□□ 1.3
CHRNA7-227ENST00000637350 ZBED9Q6R2W3 1325 aa23.2■■□□□ 1.3
CHRNA7-227ENST00000637350 CLTCQ00610 1675 aaKnown RBP23.2■■□□□ 1.3
CHRNA7-227ENST00000637350 MLECQ14165 292 aa23.18■■□□□ 1.3
CHRNA7-227ENST00000637350 RPGRIP1LQ68CZ1 1315 aa23.18■■□□□ 1.3
CHRNA7-227ENST00000637350 ADGRF5Q8IZF2 1346 aa23.18■■□□□ 1.3
CHRNA7-227ENST00000637350 PPLO60437 1756 aa23.17■■□□□ 1.3
CHRNA7-227ENST00000637350 NRXN1Q9ULB1 1477 aa23.17■■□□□ 1.3
CHRNA7-227ENST00000637350 IDI1Q13907 227 aa23.17■■□□□ 1.3
CHRNA7-227ENST00000637350 IRX6P78412 446 aaPredicted RBP23.16■■□□□ 1.3
CHRNA7-227ENST00000637350 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
CHRNA7-227ENST00000637350 ERVK-7P63135 1459 aa23.15■■□□□ 1.3
CHRNA7-227ENST00000637350 FBXO31Q5XUX0 539 aaPredicted RBP23.14■■□□□ 1.29
CHRNA7-227ENST00000637350 DISP3Q9P2K9 1392 aa23.14■■□□□ 1.29
CHRNA7-227ENST00000637350 SCAF11Q99590 1463 aaKnown RBP23.12■■□□□ 1.29
CHRNA7-227ENST00000637350 ESF1Q9H501 851 aaKnown RBP23.11■■□□□ 1.29
CHRNA7-227ENST00000637350 CFAP70Q5T0N1 1121 aa23.1■■□□□ 1.29
CHRNA7-227ENST00000637350 TESK2Q96S53 571 aa23.1■■□□□ 1.29
CHRNA7-227ENST00000637350 PIK3C2GO75747 1445 aa23.09■■□□□ 1.29
CHRNA7-227ENST00000637350 TMEM131LA2VDJ0 1609 aa23.08■■□□□ 1.29
CHRNA7-227ENST00000637350 SPATA31D1Q6ZQQ2 1576 aa23.08■■□□□ 1.29
CHRNA7-227ENST00000637350 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.29
CHRNA7-227ENST00000637350 VGFO15240 615 aaPredicted RBP23.07■■□□□ 1.28
CHRNA7-227ENST00000637350 MYO5BQ9ULV0 1848 aa23.07■■□□□ 1.28
CHRNA7-227ENST00000637350 PNISRQ8TF01 805 aaKnown RBP23.06■■□□□ 1.28
CHRNA7-227ENST00000637350 EIF3AQ14152 1382 aaKnown RBP23.06■■□□□ 1.28
CHRNA7-227ENST00000637350 ZMYM3Q14202 1370 aa23.06■■□□□ 1.28
CHRNA7-227ENST00000637350 SETBP1Q9Y6X0 1596 aa23.05■■□□□ 1.28
CHRNA7-227ENST00000637350 SENP3-EIF4A1A0A087X0R7 540 aa23.04■■□□□ 1.28
CHRNA7-227ENST00000637350 TMF1P82094 1093 aa23.04■■□□□ 1.28
CHRNA7-227ENST00000637350 C14orf93Q9H972 538 aaKnown RBP23.04■■□□□ 1.28
CHRNA7-227ENST00000637350 MYBBP1AQ9BQG0 1328 aaKnown RBP23.03■■□□□ 1.28
CHRNA7-227ENST00000637350 ZFYVE9O95405 1425 aa23.03■■□□□ 1.28
CHRNA7-227ENST00000637350 PARD3Q8TEW0 1356 aa23.02■■□□□ 1.28
CHRNA7-227ENST00000637350 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
CHRNA7-227ENST00000637350 KTN1Q86UP2 1357 aaKnown RBP23.02■■□□□ 1.28
CHRNA7-227ENST00000637350 BRD4O60885 1362 aaPredicted RBP23.01■■□□□ 1.27
CHRNA7-227ENST00000637350 TMC1Q8TDI8 760 aa23.01■■□□□ 1.27
CHRNA7-227ENST00000637350 PER1O15534 1290 aaPredicted RBP23■■□□□ 1.27
CHRNA7-227ENST00000637350 STAG3Q9UJ98 1225 aa23■■□□□ 1.27
CHRNA7-227ENST00000637350 RALBP1Q15311 655 aa23■■□□□ 1.27
CHRNA7-227ENST00000637350 NUTM2DQ5VT03 806 aaPredicted RBP23■■□□□ 1.27
CHRNA7-227ENST00000637350 SMG6Q86US8 1419 aaKnown RBP23■■□□□ 1.27
CHRNA7-227ENST00000637350 MYOM1P52179 1685 aa22.98■■□□□ 1.27
CHRNA7-227ENST00000637350 ADGRB1O14514 1584 aa22.97■■□□□ 1.27
CHRNA7-227ENST00000637350 SLC24A1O60721 1099 aa22.95■■□□□ 1.26
CHRNA7-227ENST00000637350 A2ML1A8K2U0 1454 aa22.94■■□□□ 1.26
CHRNA7-227ENST00000637350 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
CHRNA7-227ENST00000637350 MYO3AQ8NEV4 1616 aa22.93■■□□□ 1.26
CHRNA7-227ENST00000637350 TMEM132EQ6IEE7 984 aa22.92■■□□□ 1.26
CHRNA7-227ENST00000637350 PANK3Q9H999 370 aa22.92■■□□□ 1.26
CHRNA7-227ENST00000637350 TNRQ92752 1358 aa22.91■■□□□ 1.26
CHRNA7-227ENST00000637350 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
CHRNA7-227ENST00000637350 CC2D1BQ5T0F9 858 aaKnown RBP22.9■■□□□ 1.26
CHRNA7-227ENST00000637350 NLRP13Q86W25 1043 aa22.89■■□□□ 1.26
CHRNA7-227ENST00000637350 TRAK1Q9UPV9 953 aa22.89■■□□□ 1.26
CHRNA7-227ENST00000637350 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.26
CHRNA7-227ENST00000637350 CENPJQ9HC77 1338 aaPredicted RBP22.88■■□□□ 1.25
CHRNA7-227ENST00000637350 ERICH6BQ5W0A0 696 aa22.87■■□□□ 1.25
CHRNA7-227ENST00000637350 KDM5AP29375 1690 aaKnown RBP22.87■■□□□ 1.25
CHRNA7-227ENST00000637350 RIMS2Q9UQ26 1411 aa22.86■■□□□ 1.25
CHRNA7-227ENST00000637350 FER1L4A9Z1Z3 1794 aa22.86■■□□□ 1.25
CHRNA7-227ENST00000637350 PPP4R2Q9NY27 417 aa22.85■■□□□ 1.25
CHRNA7-227ENST00000637350 C3P01024 1663 aa22.83■■□□□ 1.24
CHRNA7-227ENST00000637350 QRICH2Q9H0J4 1663 aa22.83■■□□□ 1.24
CHRNA7-227ENST00000637350 ASXL1Q8IXJ9 1541 aa22.82■■□□□ 1.24
CHRNA7-227ENST00000637350 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
CHRNA7-227ENST00000637350 RNF123Q5XPI4 1314 aa22.82■■□□□ 1.24
CHRNA7-227ENST00000637350 ARHGEF28Q8N1W1 1705 aaKnown RBP22.82■■□□□ 1.24
CHRNA7-227ENST00000637350 CEBPAP49715 358 aaPredicted RBP22.81■■□□□ 1.24
CHRNA7-227ENST00000637350 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.81■■□□□ 1.24
CHRNA7-227ENST00000637350 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
CHRNA7-227ENST00000637350 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
CHRNA7-227ENST00000637350 UBR1Q8IWV7 1749 aa22.8■■□□□ 1.24
CHRNA7-227ENST00000637350 B4GALNT3Q6L9W6 998 aa22.8■■□□□ 1.24
CHRNA7-227ENST00000637350 RBM19Q9Y4C8 960 aaKnown RBP22.8■■□□□ 1.24
CHRNA7-227ENST00000637350 HDGFP51858 240 aaKnown RBP22.79■■□□□ 1.24
CHRNA7-227ENST00000637350 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
CHRNA7-227ENST00000637350 YTHDC2Q9H6S0 1430 aaKnown RBP22.76■■□□□ 1.23
CHRNA7-227ENST00000637350 STK26Q9P289 416 aa22.75■■□□□ 1.23
CHRNA7-227ENST00000637350 SALL2Q9Y467 1007 aaPredicted RBP22.75■■□□□ 1.23
CHRNA7-227ENST00000637350 TMEM2Q9UHN6 1383 aa22.75■■□□□ 1.23
CHRNA7-227ENST00000637350 SETD1AO15047 1707 aaKnown RBP22.73■■□□□ 1.23
CHRNA7-227ENST00000637350 AMER1Q5JTC6 1135 aaPredicted RBP22.73■■□□□ 1.23
CHRNA7-227ENST00000637350 PTPRMP28827 1452 aa22.72■■□□□ 1.23
CHRNA7-227ENST00000637350 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms