RNA–Protein interactions for RNA: ENST00000637340.1

EFHC1-232, Transcript of EF-hand domain containing 1, humanhuman

TSL 1 (best)

Gene EFHC1, Length 4,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-232ENST00000637340 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
EFHC1-232ENST00000637340 TNPO1Q92973 898 aaKnown RBP13.82□□□□□ -0.2
EFHC1-232ENST00000637340 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
EFHC1-232ENST00000637340 ZKSCAN2Q63HK3 967 aa13.81□□□□□ -0.2
EFHC1-232ENST00000637340 DZIP1LQ8IYY4 767 aaKnown RBP13.81□□□□□ -0.2
EFHC1-232ENST00000637340 DISP3Q9P2K9 1392 aa13.81□□□□□ -0.2
EFHC1-232ENST00000637340 ABCC5O15440 1437 aa13.81□□□□□ -0.2
EFHC1-232ENST00000637340 TPM2P07951 284 aa13.8□□□□□ -0.2
EFHC1-232ENST00000637340 BICRAQ9NZM4 1560 aa13.8□□□□□ -0.2
EFHC1-232ENST00000637340 RLBP1P12271 317 aa13.8□□□□□ -0.2
EFHC1-232ENST00000637340 UQCRHLA0A096LP55 91 aa13.8□□□□□ -0.2
EFHC1-232ENST00000637340 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
EFHC1-232ENST00000637340 UQCRHP07919 91 aa13.8□□□□□ -0.2
EFHC1-232ENST00000637340 PDE3AQ14432 1141 aa13.8□□□□□ -0.2
EFHC1-232ENST00000637340 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.8□□□□□ -0.2
EFHC1-232ENST00000637340 EHBP1L1Q8N3D4 1523 aa13.79□□□□□ -0.2
EFHC1-232ENST00000637340 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
EFHC1-232ENST00000637340 SSFA2P28290 1259 aa13.79□□□□□ -0.2
EFHC1-232ENST00000637340 NUTM2DQ5VT03 806 aaPredicted RBP13.79□□□□□ -0.2
EFHC1-232ENST00000637340 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
EFHC1-232ENST00000637340 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
EFHC1-232ENST00000637340 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
EFHC1-232ENST00000637340 TEX14Q8IWB6 1497 aa13.78□□□□□ -0.2
EFHC1-232ENST00000637340 KDM5BQ9UGL1 1544 aa13.77□□□□□ -0.2
EFHC1-232ENST00000637340 TRAK1Q9UPV9 953 aa13.77□□□□□ -0.2
EFHC1-232ENST00000637340 PRG4Q92954 1404 aaPredicted RBP13.77□□□□□ -0.2
EFHC1-232ENST00000637340 WWC1Q8IX03 1113 aa13.77□□□□□ -0.21
EFHC1-232ENST00000637340 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
EFHC1-232ENST00000637340 ERBB4Q15303 1308 aa13.77□□□□□ -0.21
EFHC1-232ENST00000637340 EFCAB5A4FU69 1503 aa13.76□□□□□ -0.21
EFHC1-232ENST00000637340 SKOR2Q2VWA4 1001 aaPredicted RBP13.76□□□□□ -0.21
EFHC1-232ENST00000637340 PDCL3Q9H2J4 239 aa13.76□□□□□ -0.21
EFHC1-232ENST00000637340 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
EFHC1-232ENST00000637340 CFAP43Q8NDM7 1665 aa13.76□□□□□ -0.21
EFHC1-232ENST00000637340 GAS2L3Q86XJ1 694 aa13.76□□□□□ -0.21
EFHC1-232ENST00000637340 ZSCAN30Q86W11 494 aa13.76□□□□□ -0.21
EFHC1-232ENST00000637340 EXOSC9Q06265 439 aaKnown RBP13.75□□□□□ -0.21
EFHC1-232ENST00000637340 USP19O94966 1318 aa13.74□□□□□ -0.21
EFHC1-232ENST00000637340 RARSP54136 660 aaKnown RBP13.74□□□□□ -0.21
EFHC1-232ENST00000637340 CCDC173Q0VFZ6 552 aa13.74□□□□□ -0.21
EFHC1-232ENST00000637340 FAM177BA6PVY3 158 aa13.73□□□□□ -0.21
EFHC1-232ENST00000637340 DENND4BO75064 1496 aaPredicted RBP13.73□□□□□ -0.21
EFHC1-232ENST00000637340 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
EFHC1-232ENST00000637340 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
EFHC1-232ENST00000637340 KIAA2012Q0VF49 1180 aa13.73□□□□□ -0.21
EFHC1-232ENST00000637340 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
EFHC1-232ENST00000637340 ERBINQ96RT1 1412 aa13.73□□□□□ -0.21
EFHC1-232ENST00000637340 MTHFSP49914 203 aa13.73□□□□□ -0.21
EFHC1-232ENST00000637340 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
EFHC1-232ENST00000637340 NESP48681 1621 aa13.72□□□□□ -0.21
EFHC1-232ENST00000637340 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
EFHC1-232ENST00000637340 EIF3AQ14152 1382 aaKnown RBP13.71□□□□□ -0.21
EFHC1-232ENST00000637340 IGSF3O75054 1194 aa13.71□□□□□ -0.21
EFHC1-232ENST00000637340 STK26Q9P289 416 aa13.71□□□□□ -0.21
EFHC1-232ENST00000637340 CBX1P83916 185 aa13.71□□□□□ -0.21
EFHC1-232ENST00000637340 NKTRP30414 1462 aaKnown RBP13.71□□□□□ -0.22
EFHC1-232ENST00000637340 RUNDC1Q96C34 613 aa13.71□□□□□ -0.22
EFHC1-232ENST00000637340 MVPQ14764 893 aaKnown RBP13.7□□□□□ -0.22
EFHC1-232ENST00000637340 ANTXR1Q9H6X2 564 aa13.7□□□□□ -0.22
EFHC1-232ENST00000637340 CDK11BP21127 795 aaKnown RBP13.7□□□□□ -0.22
EFHC1-232ENST00000637340 NOB1Q9ULX3 412 aaKnown RBP13.7□□□□□ -0.22
EFHC1-232ENST00000637340 SNAPC4Q5SXM2 1469 aa13.7□□□□□ -0.22
EFHC1-232ENST00000637340 CFAP70Q5T0N1 1121 aa13.69□□□□□ -0.22
EFHC1-232ENST00000637340 TSC1Q92574 1164 aa13.69□□□□□ -0.22
EFHC1-232ENST00000637340 DDX19BQ9UMR2 479 aa13.69□□□□□ -0.22
EFHC1-232ENST00000637340 SYCE3A1L190 88 aa13.69□□□□□ -0.22
EFHC1-232ENST00000637340 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
EFHC1-232ENST00000637340 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
EFHC1-232ENST00000637340 TESK2Q96S53 571 aa13.68□□□□□ -0.22
EFHC1-232ENST00000637340 CHMP3Q9Y3E7 222 aa13.68□□□□□ -0.22
EFHC1-232ENST00000637340 BCORL1Q5H9F3 1711 aa13.68□□□□□ -0.22
EFHC1-232ENST00000637340 CASC1Q6TDU7 716 aa13.68□□□□□ -0.22
EFHC1-232ENST00000637340 CHAMP1Q96JM3 812 aa13.68□□□□□ -0.22
EFHC1-232ENST00000637340 UGGT2Q9NYU1 1516 aa13.68□□□□□ -0.22
EFHC1-232ENST00000637340 K7ELQ4 463 aaPredicted RBP13.68□□□□□ -0.22
EFHC1-232ENST00000637340 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
EFHC1-232ENST00000637340 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.67□□□□□ -0.22
EFHC1-232ENST00000637340 THOC2Q8NI27 1593 aaKnown RBP13.67□□□□□ -0.22
EFHC1-232ENST00000637340 ZNF830Q96NB3 372 aaPredicted RBP13.67□□□□□ -0.22
EFHC1-232ENST00000637340 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
EFHC1-232ENST00000637340 PTMSP20962 102 aa13.67□□□□□ -0.22
EFHC1-232ENST00000637340 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
EFHC1-232ENST00000637340 ROCK1Q13464 1354 aa13.66□□□□□ -0.22
EFHC1-232ENST00000637340 DRC7Q8IY82 874 aa13.66□□□□□ -0.22
EFHC1-232ENST00000637340 CHAF1AQ13111 956 aaPredicted RBP13.65□□□□□ -0.22
EFHC1-232ENST00000637340 GRIN2BQ13224 1484 aa13.65□□□□□ -0.22
EFHC1-232ENST00000637340 MAGI3Q5TCQ9 1506 aa13.65□□□□□ -0.22
EFHC1-232ENST00000637340 GAS2L2Q8NHY3 880 aa13.65□□□□□ -0.22
EFHC1-232ENST00000637340 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
EFHC1-232ENST00000637340 SOX12O15370 315 aa13.64□□□□□ -0.23
EFHC1-232ENST00000637340 RIPK4P57078 832 aa13.64□□□□□ -0.23
EFHC1-232ENST00000637340 TMEM132EQ6IEE7 984 aa13.64□□□□□ -0.23
EFHC1-232ENST00000637340 SSH1Q8WYL5 1049 aa13.64□□□□□ -0.23
EFHC1-232ENST00000637340 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
EFHC1-232ENST00000637340 HECW1Q76N89 1606 aa13.64□□□□□ -0.23
EFHC1-232ENST00000637340 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
EFHC1-232ENST00000637340 ZNF771Q7L3S4 317 aaPredicted RBP13.64□□□□□ -0.23
EFHC1-232ENST00000637340 PZPP20742 1482 aa13.64□□□□□ -0.23
EFHC1-232ENST00000637340 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
EFHC1-232ENST00000637340 TRIM27P14373 513 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms