RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 PKD2Q13563 968 aa20.03■□□□□ 0.8
CACNA1A-238ENST00000637276 SPDYE4A6NLX3 237 aa20.02■□□□□ 0.8
CACNA1A-238ENST00000637276 WWC2Q6AWC2 1192 aa20.01■□□□□ 0.79
CACNA1A-238ENST00000637276 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
CACNA1A-238ENST00000637276 CAGE1Q8TC20 777 aa20.01■□□□□ 0.79
CACNA1A-238ENST00000637276 BICD2Q8TD16 824 aa20■□□□□ 0.79
CACNA1A-238ENST00000637276 HSP90AA2PQ14568 343 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-238ENST00000637276 FAM13BQ9NYF5 915 aa19.99■□□□□ 0.79
CACNA1A-238ENST00000637276 WDR78Q5VTH9 848 aa19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 MATR3P43243 847 aaKnown RBP eCLIP19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 C9orf78Q9NZ63 289 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 ZHX3Q9H4I2 956 aa19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 HSP90AB3PQ58FF7 597 aa19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 TTC5Q8N0Z6 440 aa19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 NUTM2BA6NNL0 878 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 NUTM2EB1AL46 878 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 LMOD3Q0VAK6 560 aa19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 NUTM2AQ8IVF1 878 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
CACNA1A-238ENST00000637276 CPLX1O14810 134 aa19.97■□□□□ 0.79
CACNA1A-238ENST00000637276 NEUROD6Q96NK8 337 aa19.97■□□□□ 0.79
CACNA1A-238ENST00000637276 IPO7O95373 1038 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-238ENST00000637276 PODXL2Q9NZ53 605 aa19.97■□□□□ 0.79
CACNA1A-238ENST00000637276 ST18O60284 1047 aa19.96■□□□□ 0.79
CACNA1A-238ENST00000637276 ERICH2A1L162 156 aa19.96■□□□□ 0.79
CACNA1A-238ENST00000637276 DDX49Q9Y6V7 483 aaKnown RBP19.96■□□□□ 0.79
CACNA1A-238ENST00000637276 VPS37CA5D8V6 355 aaPredicted RBP19.96■□□□□ 0.79
CACNA1A-238ENST00000637276 TRAK1Q9UPV9 953 aa19.96■□□□□ 0.79
CACNA1A-238ENST00000637276 RBM5P52756 815 aaKnown RBP eCLIP19.95■□□□□ 0.78
CACNA1A-238ENST00000637276 HMMRO75330 724 aa19.95■□□□□ 0.78
CACNA1A-238ENST00000637276 PIBF1Q8WXW3 757 aa19.95■□□□□ 0.78
CACNA1A-238ENST00000637276 DNAJC2Q99543 621 aaKnown RBP19.95■□□□□ 0.78
CACNA1A-238ENST00000637276 IPO9Q96P70 1041 aaKnown RBP19.95■□□□□ 0.78
CACNA1A-238ENST00000637276 DIAPH3Q9NSV4 1193 aa19.94■□□□□ 0.78
CACNA1A-238ENST00000637276 EID1Q9Y6B2 187 aa19.94■□□□□ 0.78
CACNA1A-238ENST00000637276 PHF14O94880 888 aa19.94■□□□□ 0.78
CACNA1A-238ENST00000637276 OFD1O75665 1012 aa19.93■□□□□ 0.78
CACNA1A-238ENST00000637276 WASHC4Q2M389 1173 aa19.93■□□□□ 0.78
CACNA1A-238ENST00000637276 CCDC47Q96A33 483 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-238ENST00000637276 CA8P35219 290 aa19.92■□□□□ 0.78
CACNA1A-238ENST00000637276 CEBPZQ03701 1054 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-238ENST00000637276 PUS7Q96PZ0 661 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-238ENST00000637276 SPINK5Q9NQ38 1064 aaPredicted RBP19.92■□□□□ 0.78
CACNA1A-238ENST00000637276 TSHZ2Q9NRE2 1034 aa19.91■□□□□ 0.78
CACNA1A-238ENST00000637276 GPS2Q13227 327 aa19.91■□□□□ 0.78
CACNA1A-238ENST00000637276 GRM1Q13255 1194 aa19.91■□□□□ 0.78
CACNA1A-238ENST00000637276 ENOX2Q16206 610 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-238ENST00000637276 CENPJQ9HC77 1338 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-238ENST00000637276 SEPT11Q9NVA2 429 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-238ENST00000637276 MPNDQ8N594 471 aa19.88■□□□□ 0.77
CACNA1A-238ENST00000637276 CENPHQ9H3R5 247 aa19.88■□□□□ 0.77
CACNA1A-238ENST00000637276 PIP4K2BP78356 416 aa19.88■□□□□ 0.77
CACNA1A-238ENST00000637276 IFT57Q9NWB7 429 aa19.87■□□□□ 0.77
CACNA1A-238ENST00000637276 IFIT2P09913 472 aaKnown RBP19.87■□□□□ 0.77
CACNA1A-238ENST00000637276 ANKRD20A12PQ8NF67 263 aa19.87■□□□□ 0.77
CACNA1A-238ENST00000637276 RSPH4AQ5TD94 716 aa19.86■□□□□ 0.77
CACNA1A-238ENST00000637276 TRDNQ13061 729 aa19.86■□□□□ 0.77
CACNA1A-238ENST00000637276 FMNL2Q96PY5 1086 aa19.86■□□□□ 0.77
CACNA1A-238ENST00000637276 NEBLO76041 1014 aa19.86■□□□□ 0.77
CACNA1A-238ENST00000637276 H0YHG0 523 aa19.85■□□□□ 0.77
CACNA1A-238ENST00000637276 TEFQ10587 303 aa19.85■□□□□ 0.77
CACNA1A-238ENST00000637276 TAX1BP1Q86VP1 789 aa19.85■□□□□ 0.77
CACNA1A-238ENST00000637276 FAM193AP78312 1265 aa19.85■□□□□ 0.77
CACNA1A-238ENST00000637276 FAM161AQ3B820 660 aa19.85■□□□□ 0.77
CACNA1A-238ENST00000637276 KRT18P05783 430 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-238ENST00000637276 KIF3BO15066 747 aa19.83■□□□□ 0.77
CACNA1A-238ENST00000637276 PSME1Q06323 249 aa19.83■□□□□ 0.77
CACNA1A-238ENST00000637276 KIF3AQ9Y496 699 aa19.83■□□□□ 0.76
CACNA1A-238ENST00000637276 SEPT7Q16181 437 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-238ENST00000637276 SSR1P43307 286 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-238ENST00000637276 TRMT1LQ7Z2T5 733 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-238ENST00000637276 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
CACNA1A-238ENST00000637276 HNRNPMP52272 730 aaKnown RBP eCLIP19.82■□□□□ 0.76
CACNA1A-238ENST00000637276 PDCL3Q9H2J4 239 aa19.82■□□□□ 0.76
CACNA1A-238ENST00000637276 CRBNQ96SW2 442 aa19.81■□□□□ 0.76
CACNA1A-238ENST00000637276 HMGN5P82970 282 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-238ENST00000637276 FAM177A1Q8N128 213 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-238ENST00000637276 RBM42Q9BTD8 480 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-238ENST00000637276 SYCP1Q15431 976 aa19.81■□□□□ 0.76
CACNA1A-238ENST00000637276 TEX35Q5T0J7 233 aa19.8■□□□□ 0.76
CACNA1A-238ENST00000637276 MPHOSPH10O00566 681 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-238ENST00000637276 CDK5RAP3Q96JB5 506 aa19.8■□□□□ 0.76
CACNA1A-238ENST00000637276 TSPYL1Q9H0U9 437 aa19.79■□□□□ 0.76
CACNA1A-238ENST00000637276 MAP4K4O95819 1239 aaPredicted RBP19.79■□□□□ 0.76
CACNA1A-238ENST00000637276 NEXNQ0ZGT2 675 aa19.79■□□□□ 0.76
CACNA1A-238ENST00000637276 SASS6Q6UVJ0 657 aa19.79■□□□□ 0.76
CACNA1A-238ENST00000637276 SERPINA10Q9UK55 444 aa19.79■□□□□ 0.76
CACNA1A-238ENST00000637276 MNS1Q8NEH6 495 aa19.78■□□□□ 0.76
CACNA1A-238ENST00000637276 KIF27Q86VH2 1401 aa19.78■□□□□ 0.76
CACNA1A-238ENST00000637276 SF3B2Q13435 895 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-238ENST00000637276 CCER2I3L3R5 266 aa19.78■□□□□ 0.76
CACNA1A-238ENST00000637276 COG6Q9Y2V7 657 aa19.77■□□□□ 0.76
CACNA1A-238ENST00000637276 NUP155O75694 1391 aa19.77■□□□□ 0.76
CACNA1A-238ENST00000637276 EXOC6Q8TAG9 804 aa19.77■□□□□ 0.76
CACNA1A-238ENST00000637276 MPHOSPH9Q99550 1183 aa19.77■□□□□ 0.76
CACNA1A-238ENST00000637276 RIC3Q7Z5B4 369 aa19.77■□□□□ 0.76
CACNA1A-238ENST00000637276 MINK1Q8N4C8 1332 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-238ENST00000637276 DDX11L8A8MPP1 907 aa19.77■□□□□ 0.75
CACNA1A-238ENST00000637276 ZNF219Q9P2Y4 722 aaPredicted RBP19.76■□□□□ 0.75
CACNA1A-238ENST00000637276 SMC2O95347 1197 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms