RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	PKD2	Q13563	968 aa		20.03	■□□□□ 0.8
CACNA1A-238	ENST00000637276	SPDYE4	A6NLX3	237 aa		20.02	■□□□□ 0.8
CACNA1A-238	ENST00000637276	WWC2	Q6AWC2	1192 aa		20.01	■□□□□ 0.79
CACNA1A-238	ENST00000637276	PMFBP1	Q8TBY8	1022 aa		20.01	■□□□□ 0.79
CACNA1A-238	ENST00000637276	CAGE1	Q8TC20	777 aa		20.01	■□□□□ 0.79
CACNA1A-238	ENST00000637276	BICD2	Q8TD16	824 aa		20	■□□□□ 0.79
CACNA1A-238	ENST00000637276	HSP90AA2P	Q14568	343 aa	Predicted RBP	19.99	■□□□□ 0.79
CACNA1A-238	ENST00000637276	FAM13B	Q9NYF5	915 aa		19.99	■□□□□ 0.79
CACNA1A-238	ENST00000637276	WDR78	Q5VTH9	848 aa		19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	MATR3	P43243	847 aa	Known RBP eCLIP	19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	C9orf78	Q9NZ63	289 aa	Predicted RBP	19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	ZHX3	Q9H4I2	956 aa		19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	HSP90AB3P	Q58FF7	597 aa		19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	TTC5	Q8N0Z6	440 aa		19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	NUTM2B	A6NNL0	878 aa	Predicted RBP	19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	NUTM2E	B1AL46	878 aa	Predicted RBP	19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	LMOD3	Q0VAK6	560 aa		19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	NUTM2A	Q8IVF1	878 aa	Predicted RBP	19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	CCDC180	Q9P1Z9	1646 aa		19.98	■□□□□ 0.79
CACNA1A-238	ENST00000637276	CPLX1	O14810	134 aa		19.97	■□□□□ 0.79
CACNA1A-238	ENST00000637276	NEUROD6	Q96NK8	337 aa		19.97	■□□□□ 0.79
CACNA1A-238	ENST00000637276	IPO7	O95373	1038 aa	Known RBP	19.97	■□□□□ 0.79
CACNA1A-238	ENST00000637276	PODXL2	Q9NZ53	605 aa		19.97	■□□□□ 0.79
CACNA1A-238	ENST00000637276	ST18	O60284	1047 aa		19.96	■□□□□ 0.79
CACNA1A-238	ENST00000637276	ERICH2	A1L162	156 aa		19.96	■□□□□ 0.79
CACNA1A-238	ENST00000637276	DDX49	Q9Y6V7	483 aa	Known RBP	19.96	■□□□□ 0.79
CACNA1A-238	ENST00000637276	VPS37C	A5D8V6	355 aa	Predicted RBP	19.96	■□□□□ 0.79
CACNA1A-238	ENST00000637276	TRAK1	Q9UPV9	953 aa		19.96	■□□□□ 0.79
CACNA1A-238	ENST00000637276	RBM5	P52756	815 aa	Known RBP eCLIP	19.95	■□□□□ 0.78
CACNA1A-238	ENST00000637276	HMMR	O75330	724 aa		19.95	■□□□□ 0.78
CACNA1A-238	ENST00000637276	PIBF1	Q8WXW3	757 aa		19.95	■□□□□ 0.78
CACNA1A-238	ENST00000637276	DNAJC2	Q99543	621 aa	Known RBP	19.95	■□□□□ 0.78
CACNA1A-238	ENST00000637276	IPO9	Q96P70	1041 aa	Known RBP	19.95	■□□□□ 0.78
CACNA1A-238	ENST00000637276	DIAPH3	Q9NSV4	1193 aa		19.94	■□□□□ 0.78
CACNA1A-238	ENST00000637276	EID1	Q9Y6B2	187 aa		19.94	■□□□□ 0.78
CACNA1A-238	ENST00000637276	PHF14	O94880	888 aa		19.94	■□□□□ 0.78
CACNA1A-238	ENST00000637276	OFD1	O75665	1012 aa		19.93	■□□□□ 0.78
CACNA1A-238	ENST00000637276	WASHC4	Q2M389	1173 aa		19.93	■□□□□ 0.78
CACNA1A-238	ENST00000637276	CCDC47	Q96A33	483 aa	Known RBP	19.93	■□□□□ 0.78
CACNA1A-238	ENST00000637276	CA8	P35219	290 aa		19.92	■□□□□ 0.78
CACNA1A-238	ENST00000637276	CEBPZ	Q03701	1054 aa	Known RBP	19.92	■□□□□ 0.78
CACNA1A-238	ENST00000637276	PUS7	Q96PZ0	661 aa	Known RBP	19.92	■□□□□ 0.78
CACNA1A-238	ENST00000637276	SPINK5	Q9NQ38	1064 aa	Predicted RBP	19.92	■□□□□ 0.78
CACNA1A-238	ENST00000637276	TSHZ2	Q9NRE2	1034 aa		19.91	■□□□□ 0.78
CACNA1A-238	ENST00000637276	GPS2	Q13227	327 aa		19.91	■□□□□ 0.78
CACNA1A-238	ENST00000637276	GRM1	Q13255	1194 aa		19.91	■□□□□ 0.78
CACNA1A-238	ENST00000637276	ENOX2	Q16206	610 aa	Known RBP	19.9	■□□□□ 0.78
CACNA1A-238	ENST00000637276	CENPJ	Q9HC77	1338 aa	Predicted RBP	19.9	■□□□□ 0.78
CACNA1A-238	ENST00000637276	SEPT11	Q9NVA2	429 aa	Known RBP	19.9	■□□□□ 0.78
CACNA1A-238	ENST00000637276	MPND	Q8N594	471 aa		19.88	■□□□□ 0.77
CACNA1A-238	ENST00000637276	CENPH	Q9H3R5	247 aa		19.88	■□□□□ 0.77
CACNA1A-238	ENST00000637276	PIP4K2B	P78356	416 aa		19.88	■□□□□ 0.77
CACNA1A-238	ENST00000637276	IFT57	Q9NWB7	429 aa		19.87	■□□□□ 0.77
CACNA1A-238	ENST00000637276	IFIT2	P09913	472 aa	Known RBP	19.87	■□□□□ 0.77
CACNA1A-238	ENST00000637276	ANKRD20A12P	Q8NF67	263 aa		19.87	■□□□□ 0.77
CACNA1A-238	ENST00000637276	RSPH4A	Q5TD94	716 aa		19.86	■□□□□ 0.77
CACNA1A-238	ENST00000637276	TRDN	Q13061	729 aa		19.86	■□□□□ 0.77
CACNA1A-238	ENST00000637276	FMNL2	Q96PY5	1086 aa		19.86	■□□□□ 0.77
CACNA1A-238	ENST00000637276	NEBL	O76041	1014 aa		19.86	■□□□□ 0.77
CACNA1A-238	ENST00000637276		H0YHG0	523 aa		19.85	■□□□□ 0.77
CACNA1A-238	ENST00000637276	TEF	Q10587	303 aa		19.85	■□□□□ 0.77
CACNA1A-238	ENST00000637276	TAX1BP1	Q86VP1	789 aa		19.85	■□□□□ 0.77
CACNA1A-238	ENST00000637276	FAM193A	P78312	1265 aa		19.85	■□□□□ 0.77
CACNA1A-238	ENST00000637276	FAM161A	Q3B820	660 aa		19.85	■□□□□ 0.77
CACNA1A-238	ENST00000637276	KRT18	P05783	430 aa	Known RBP	19.84	■□□□□ 0.77
CACNA1A-238	ENST00000637276	KIF3B	O15066	747 aa		19.83	■□□□□ 0.77
CACNA1A-238	ENST00000637276	PSME1	Q06323	249 aa		19.83	■□□□□ 0.77
CACNA1A-238	ENST00000637276	KIF3A	Q9Y496	699 aa		19.83	■□□□□ 0.76
CACNA1A-238	ENST00000637276	SEPT7	Q16181	437 aa	Known RBP	19.82	■□□□□ 0.76
CACNA1A-238	ENST00000637276	SSR1	P43307	286 aa	Known RBP	19.82	■□□□□ 0.76
CACNA1A-238	ENST00000637276	TRMT1L	Q7Z2T5	733 aa	Known RBP	19.82	■□□□□ 0.76
CACNA1A-238	ENST00000637276	STRN4	Q9NRL3	753 aa		19.82	■□□□□ 0.76
CACNA1A-238	ENST00000637276	HNRNPM	P52272	730 aa	Known RBP eCLIP	19.82	■□□□□ 0.76
CACNA1A-238	ENST00000637276	PDCL3	Q9H2J4	239 aa		19.82	■□□□□ 0.76
CACNA1A-238	ENST00000637276	CRBN	Q96SW2	442 aa		19.81	■□□□□ 0.76
CACNA1A-238	ENST00000637276	HMGN5	P82970	282 aa	Known RBP	19.81	■□□□□ 0.76
CACNA1A-238	ENST00000637276	FAM177A1	Q8N128	213 aa	Predicted RBP	19.81	■□□□□ 0.76
CACNA1A-238	ENST00000637276	RBM42	Q9BTD8	480 aa	Known RBP	19.81	■□□□□ 0.76
CACNA1A-238	ENST00000637276	SYCP1	Q15431	976 aa		19.81	■□□□□ 0.76
CACNA1A-238	ENST00000637276	TEX35	Q5T0J7	233 aa		19.8	■□□□□ 0.76
CACNA1A-238	ENST00000637276	MPHOSPH10	O00566	681 aa	Known RBP	19.8	■□□□□ 0.76
CACNA1A-238	ENST00000637276	CDK5RAP3	Q96JB5	506 aa		19.8	■□□□□ 0.76
CACNA1A-238	ENST00000637276	TSPYL1	Q9H0U9	437 aa		19.79	■□□□□ 0.76
CACNA1A-238	ENST00000637276	MAP4K4	O95819	1239 aa	Predicted RBP	19.79	■□□□□ 0.76
CACNA1A-238	ENST00000637276	NEXN	Q0ZGT2	675 aa		19.79	■□□□□ 0.76
CACNA1A-238	ENST00000637276	SASS6	Q6UVJ0	657 aa		19.79	■□□□□ 0.76
CACNA1A-238	ENST00000637276	SERPINA10	Q9UK55	444 aa		19.79	■□□□□ 0.76
CACNA1A-238	ENST00000637276	MNS1	Q8NEH6	495 aa		19.78	■□□□□ 0.76
CACNA1A-238	ENST00000637276	KIF27	Q86VH2	1401 aa		19.78	■□□□□ 0.76
CACNA1A-238	ENST00000637276	SF3B2	Q13435	895 aa	Known RBP	19.78	■□□□□ 0.76
CACNA1A-238	ENST00000637276	CCER2	I3L3R5	266 aa		19.78	■□□□□ 0.76
CACNA1A-238	ENST00000637276	COG6	Q9Y2V7	657 aa		19.77	■□□□□ 0.76
CACNA1A-238	ENST00000637276	NUP155	O75694	1391 aa		19.77	■□□□□ 0.76
CACNA1A-238	ENST00000637276	EXOC6	Q8TAG9	804 aa		19.77	■□□□□ 0.76
CACNA1A-238	ENST00000637276	MPHOSPH9	Q99550	1183 aa		19.77	■□□□□ 0.76
CACNA1A-238	ENST00000637276	RIC3	Q7Z5B4	369 aa		19.77	■□□□□ 0.76
CACNA1A-238	ENST00000637276	MINK1	Q8N4C8	1332 aa	Predicted RBP	19.77	■□□□□ 0.76
CACNA1A-238	ENST00000637276	DDX11L8	A8MPP1	907 aa		19.77	■□□□□ 0.75
CACNA1A-238	ENST00000637276	ZNF219	Q9P2Y4	722 aa	Predicted RBP	19.76	■□□□□ 0.75
CACNA1A-238	ENST00000637276	SMC2	O95347	1197 aa		19.76	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms