RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 KIDINS220Q9ULH0 1771 aa25.23■■□□□ 1.63
CLN5-216ENST00000636780 TNNT2P45379 298 aaPredicted RBP25.23■■□□□ 1.63
CLN5-216ENST00000636780 RCAN3Q9UKA8 241 aa25.22■■□□□ 1.63
CLN5-216ENST00000636780 SCAF11Q99590 1463 aaKnown RBP25.21■■□□□ 1.63
CLN5-216ENST00000636780 SAFB2Q14151 953 aaKnown RBP eCLIP25.21■■□□□ 1.63
CLN5-216ENST00000636780 ERICH6BQ5W0A0 696 aa25.21■■□□□ 1.63
CLN5-216ENST00000636780 RNF123Q5XPI4 1314 aa25.21■■□□□ 1.63
CLN5-216ENST00000636780 CARD14Q9BXL6 1004 aa25.2■■□□□ 1.63
CLN5-216ENST00000636780 DEPDC5O75140 1603 aa25.2■■□□□ 1.63
CLN5-216ENST00000636780 TET3O43151 1660 aa25.2■■□□□ 1.62
CLN5-216ENST00000636780 NOS1P29475 1434 aa25.2■■□□□ 1.62
CLN5-216ENST00000636780 SKAP1Q86WV1 359 aa25.18■■□□□ 1.62
CLN5-216ENST00000636780 RNF17Q9BXT8 1623 aaKnown RBP25.18■■□□□ 1.62
CLN5-216ENST00000636780 RRP1P56182 461 aaKnown RBP25.18■■□□□ 1.62
CLN5-216ENST00000636780 CEP152O94986 1710 aa25.17■■□□□ 1.62
CLN5-216ENST00000636780 ZNF518AQ6AHZ1 1483 aa25.16■■□□□ 1.62
CLN5-216ENST00000636780 VWDEQ8N2E2 1590 aa25.16■■□□□ 1.62
CLN5-216ENST00000636780 LAMC1P11047 1609 aa25.15■■□□□ 1.62
CLN5-216ENST00000636780 NPATQ14207 1427 aa25.15■■□□□ 1.62
CLN5-216ENST00000636780 PPRC1Q5VV67 1664 aaKnown RBP25.15■■□□□ 1.62
CLN5-216ENST00000636780 SLC12A5Q9H2X9 1139 aa25.14■■□□□ 1.62
CLN5-216ENST00000636780 WDR43Q15061 677 aaKnown RBP eCLIP25.13■■□□□ 1.61
CLN5-216ENST00000636780 IQGAP1P46940 1657 aa25.12■■□□□ 1.61
CLN5-216ENST00000636780 POGZQ7Z3K3 1410 aa25.11■■□□□ 1.61
CLN5-216ENST00000636780 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
CLN5-216ENST00000636780 C20orf194Q5TEA3 1177 aa25.1■■□□□ 1.61
CLN5-216ENST00000636780 ANP32EQ9BTT0 268 aa25.1■■□□□ 1.61
CLN5-216ENST00000636780 STK26Q9P289 416 aa25.09■■□□□ 1.61
CLN5-216ENST00000636780 EFCAB6Q5THR3 1501 aa25.09■■□□□ 1.61
CLN5-216ENST00000636780 PLEKHH1Q9ULM0 1364 aa25.09■■□□□ 1.61
CLN5-216ENST00000636780 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
CLN5-216ENST00000636780 FRMPD1Q5SYB0 1578 aa25.08■■□□□ 1.61
CLN5-216ENST00000636780 ABCA6Q8N139 1617 aa25.08■■□□□ 1.6
CLN5-216ENST00000636780 ERVK-7P63135 1459 aa25.07■■□□□ 1.6
CLN5-216ENST00000636780 SPINK5Q9NQ38 1064 aaPredicted RBP25.06■■□□□ 1.6
CLN5-216ENST00000636780 IDI1Q13907 227 aa25.05■■□□□ 1.6
CLN5-216ENST00000636780 EIF3AQ14152 1382 aaKnown RBP25.05■■□□□ 1.6
CLN5-216ENST00000636780 APAF1O14727 1248 aa25.04■■□□□ 1.6
CLN5-216ENST00000636780 FBXO31Q5XUX0 539 aaPredicted RBP25.04■■□□□ 1.6
CLN5-216ENST00000636780 CENPJQ9HC77 1338 aaPredicted RBP25.04■■□□□ 1.6
CLN5-216ENST00000636780 YEATS2Q9ULM3 1422 aa25.04■■□□□ 1.6
CLN5-216ENST00000636780 MAP3K4Q9Y6R4 1608 aa25.03■■□□□ 1.6
CLN5-216ENST00000636780 DMRT2Q9Y5R5 561 aa25.03■■□□□ 1.6
CLN5-216ENST00000636780 BLMP54132 1417 aaPredicted RBP25.02■■□□□ 1.6
CLN5-216ENST00000636780 NEUROD2Q15784 382 aa25.01■■□□□ 1.59
CLN5-216ENST00000636780 STAC3Q96MF2 364 aa25.01■■□□□ 1.59
CLN5-216ENST00000636780 CRBNQ96SW2 442 aa25.01■■□□□ 1.59
CLN5-216ENST00000636780 C14orf93Q9H972 538 aaKnown RBP25.01■■□□□ 1.59
CLN5-216ENST00000636780 BCL11AQ9H165 835 aa25■■□□□ 1.59
CLN5-216ENST00000636780 KIF1BO60333 1816 aa24.99■■□□□ 1.59
CLN5-216ENST00000636780 PDE3BQ13370 1112 aa24.99■■□□□ 1.59
CLN5-216ENST00000636780 CABP2Q9NPB3 220 aa24.99■■□□□ 1.59
CLN5-216ENST00000636780 ASXL1Q8IXJ9 1541 aa24.99■■□□□ 1.59
CLN5-216ENST00000636780 MLECQ14165 292 aa24.99■■□□□ 1.59
CLN5-216ENST00000636780 FAM69CQ0P6D2 419 aa24.98■■□□□ 1.59
CLN5-216ENST00000636780 MYOM1P52179 1685 aa24.97■■□□□ 1.59
CLN5-216ENST00000636780 RRP7AQ9Y3A4 280 aaKnown RBP24.97■■□□□ 1.59
CLN5-216ENST00000636780 MLH3Q9UHC1 1453 aa24.97■■□□□ 1.59
CLN5-216ENST00000636780 DUSP27Q5VZP5 1158 aa24.96■■□□□ 1.59
CLN5-216ENST00000636780 MYOM2P54296 1465 aa24.94■■□□□ 1.58
CLN5-216ENST00000636780 HECW2Q9P2P5 1572 aa24.93■■□□□ 1.58
CLN5-216ENST00000636780 SYNMO15061 1565 aa24.93■■□□□ 1.58
CLN5-216ENST00000636780 ABCC3O15438 1527 aa24.92■■□□□ 1.58
CLN5-216ENST00000636780 MORC1Q86VD1 984 aa24.92■■□□□ 1.58
CLN5-216ENST00000636780 NSD3Q9BZ95 1437 aa24.91■■□□□ 1.58
CLN5-216ENST00000636780 ADGRB3O60242 1522 aa24.91■■□□□ 1.58
CLN5-216ENST00000636780 PIK3C2GO75747 1445 aa24.91■■□□□ 1.58
CLN5-216ENST00000636780 FANCIQ9NVI1 1328 aa24.9■■□□□ 1.58
CLN5-216ENST00000636780 GOLGA2Q08379 1002 aa24.9■■□□□ 1.58
CLN5-216ENST00000636780 SIGLEC1Q9BZZ2 1709 aa24.9■■□□□ 1.58
CLN5-216ENST00000636780 KDM5AP29375 1690 aaKnown RBP24.89■■□□□ 1.57
CLN5-216ENST00000636780 LMTK2Q8IWU2 1503 aa24.89■■□□□ 1.57
CLN5-216ENST00000636780 BCAR3O75815 825 aa24.88■■□□□ 1.57
CLN5-216ENST00000636780 ZMYM4Q5VZL5 1548 aa24.87■■□□□ 1.57
CLN5-216ENST00000636780 NRXN1Q9ULB1 1477 aa24.87■■□□□ 1.57
CLN5-216ENST00000636780 NPM2Q86SE8 214 aaKnown RBP24.87■■□□□ 1.57
CLN5-216ENST00000636780 MINK1Q8N4C8 1332 aaPredicted RBP24.87■■□□□ 1.57
CLN5-216ENST00000636780 ZNF521Q96K83 1311 aa24.86■■□□□ 1.57
CLN5-216ENST00000636780 VGFO15240 615 aaPredicted RBP24.85■■□□□ 1.57
CLN5-216ENST00000636780 IFT172Q9UG01 1749 aa24.85■■□□□ 1.57
CLN5-216ENST00000636780 PAK3O75914 559 aaPredicted RBP24.85■■□□□ 1.57
CLN5-216ENST00000636780 MTHFSP49914 203 aa24.85■■□□□ 1.57
CLN5-216ENST00000636780 SLFN5Q08AF3 891 aa24.84■■□□□ 1.57
CLN5-216ENST00000636780 SRPK2P78362 688 aaKnown RBP24.83■■□□□ 1.57
CLN5-216ENST00000636780 DIP2CQ9Y2E4 1556 aa24.83■■□□□ 1.56
CLN5-216ENST00000636780 ADGRB1O14514 1584 aa24.82■■□□□ 1.56
CLN5-216ENST00000636780 FBLN1P23142 703 aa24.81■■□□□ 1.56
CLN5-216ENST00000636780 ERICH6Q7L0X2 663 aa24.81■■□□□ 1.56
CLN5-216ENST00000636780 KIAA1210Q9ULL0 1709 aa24.81■■□□□ 1.56
CLN5-216ENST00000636780 STAG3Q9UJ98 1225 aa24.81■■□□□ 1.56
CLN5-216ENST00000636780 GGNBP2Q9H3C7 697 aa24.8■■□□□ 1.56
CLN5-216ENST00000636780 PRAM1Q96QH2 718 aa24.79■■□□□ 1.56
CLN5-216ENST00000636780 NEO1Q92859 1461 aa24.78■■□□□ 1.56
CLN5-216ENST00000636780 PPLO60437 1756 aa24.78■■□□□ 1.56
CLN5-216ENST00000636780 CAMSAP1Q5T5Y3 1602 aa24.78■■□□□ 1.56
CLN5-216ENST00000636780 NPC1L1Q9UHC9 1359 aa24.77■■□□□ 1.56
CLN5-216ENST00000636780 RPGRIP1LQ68CZ1 1315 aa24.77■■□□□ 1.56
CLN5-216ENST00000636780 TSPOAP1O95153 1857 aa24.76■■□□□ 1.55
CLN5-216ENST00000636780 EVC2Q86UK5 1308 aa24.75■■□□□ 1.55
CLN5-216ENST00000636780 CFAP74Q9C0B2 1584 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms