RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 ROCK1Q13464 1354 aa7.4□□□□□ -1.22
SCN2A-213ENST00000636769 CPLX2Q6PUV4 134 aaKnown RBP7.4□□□□□ -1.22
SCN2A-213ENST00000636769 CCDC73Q6ZRK6 1079 aa7.4□□□□□ -1.23
SCN2A-213ENST00000636769 KCNH8Q96L42 1107 aa7.4□□□□□ -1.23
SCN2A-213ENST00000636769 SMARCA2P51531 1590 aa7.4□□□□□ -1.23
SCN2A-213ENST00000636769 ANKRD45Q5TZF3 282 aa7.4□□□□□ -1.23
SCN2A-213ENST00000636769 ERLIN1O75477 346 aa7.4□□□□□ -1.23
SCN2A-213ENST00000636769 RASSF8Q8NHQ8 419 aa7.4□□□□□ -1.23
SCN2A-213ENST00000636769 CWC22Q9HCG8 908 aaKnown RBP7.39□□□□□ -1.23
SCN2A-213ENST00000636769 KIF2AO00139 706 aaPredicted RBP7.39□□□□□ -1.23
SCN2A-213ENST00000636769 RBM10P98175 930 aaKnown RBP7.39□□□□□ -1.23
SCN2A-213ENST00000636769 NOL8Q76FK4 1167 aaKnown RBP7.39□□□□□ -1.23
SCN2A-213ENST00000636769 BICD2Q8TD16 824 aa7.39□□□□□ -1.23
SCN2A-213ENST00000636769 TULP1O00294 542 aaPredicted RBP7.39□□□□□ -1.23
SCN2A-213ENST00000636769 FOXD4L5Q5VV16 416 aaPredicted RBP7.39□□□□□ -1.23
SCN2A-213ENST00000636769 FOXD4L4Q8WXT5 416 aaPredicted RBP7.39□□□□□ -1.23
SCN2A-213ENST00000636769 GOLGA6L7A0A1B0GV03 622 aa7.39□□□□□ -1.23
SCN2A-213ENST00000636769 MCM5P33992 734 aa7.39□□□□□ -1.23
SCN2A-213ENST00000636769 ABCC8Q09428 1581 aa7.39□□□□□ -1.23
SCN2A-213ENST00000636769 KIAA0754O94854 1291 aa7.39□□□□□ -1.23
SCN2A-213ENST00000636769 CCDC47Q96A33 483 aaKnown RBP7.38□□□□□ -1.23
SCN2A-213ENST00000636769 NINLQ9Y2I6 1382 aa7.38□□□□□ -1.23
SCN2A-213ENST00000636769 ERCC6Q03468 1493 aa7.38□□□□□ -1.23
SCN2A-213ENST00000636769 RABEP1Q15276 862 aa7.38□□□□□ -1.23
SCN2A-213ENST00000636769 LRRFIP1Q32MZ4 808 aaKnown RBP7.38□□□□□ -1.23
SCN2A-213ENST00000636769 SMC3Q9UQE7 1217 aa7.38□□□□□ -1.23
SCN2A-213ENST00000636769 CDC45O75419 566 aa7.38□□□□□ -1.23
SCN2A-213ENST00000636769 PAK3O75914 559 aaPredicted RBP7.38□□□□□ -1.23
SCN2A-213ENST00000636769 SRPK2P78362 688 aaKnown RBP7.38□□□□□ -1.23
SCN2A-213ENST00000636769 DZIP1LQ8IYY4 767 aaKnown RBP7.38□□□□□ -1.23
SCN2A-213ENST00000636769 API5Q9BZZ5 524 aaKnown RBP7.38□□□□□ -1.23
SCN2A-213ENST00000636769 FAM107BQ9H098 131 aa7.38□□□□□ -1.23
SCN2A-213ENST00000636769 MYO6Q9UM54 1294 aa7.38□□□□□ -1.23
SCN2A-213ENST00000636769 COG6Q9Y2V7 657 aa7.37□□□□□ -1.23
SCN2A-213ENST00000636769 ATAD2BQ9ULI0 1458 aa7.37□□□□□ -1.23
SCN2A-213ENST00000636769 PDIA4P13667 645 aaKnown RBP7.37□□□□□ -1.23
SCN2A-213ENST00000636769 ZMYND15Q9H091 742 aa7.37□□□□□ -1.23
SCN2A-213ENST00000636769 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.37□□□□□ -1.23
SCN2A-213ENST00000636769 HDGFP51858 240 aaKnown RBP7.37□□□□□ -1.23
SCN2A-213ENST00000636769 ZRSR2Q15696 482 aaKnown RBP7.37□□□□□ -1.23
SCN2A-213ENST00000636769 CNTLNQ9NXG0 1405 aa7.37□□□□□ -1.23
SCN2A-213ENST00000636769 CADPSQ9ULU8 1353 aa7.37□□□□□ -1.23
SCN2A-213ENST00000636769 PLIN1O60240 522 aa7.37□□□□□ -1.23
SCN2A-213ENST00000636769 TERF2IPQ9NYB0 399 aa7.37□□□□□ -1.23
SCN2A-213ENST00000636769 TRIM5Q9C035 493 aa7.36□□□□□ -1.23
SCN2A-213ENST00000636769 INCENPQ9NQS7 918 aa7.36□□□□□ -1.23
SCN2A-213ENST00000636769 BRD4O60885 1362 aaPredicted RBP7.36□□□□□ -1.23
SCN2A-213ENST00000636769 PATL2C9JE40 543 aaKnown RBP7.36□□□□□ -1.23
SCN2A-213ENST00000636769 CLSTN1O94985 981 aa7.36□□□□□ -1.23
SCN2A-213ENST00000636769 PDCP20941 246 aa7.36□□□□□ -1.23
SCN2A-213ENST00000636769 MCM4P33991 863 aa7.36□□□□□ -1.23
SCN2A-213ENST00000636769 PDE4CQ08493 712 aa7.35□□□□□ -1.23
SCN2A-213ENST00000636769 PES1O00541 588 aaKnown RBP7.35□□□□□ -1.23
SCN2A-213ENST00000636769 CREBRFQ8IUR6 639 aa7.35□□□□□ -1.23
SCN2A-213ENST00000636769 CCDC192P0DO97 292 aa7.35□□□□□ -1.23
SCN2A-213ENST00000636769 DYNC1I1O14576 645 aa7.35□□□□□ -1.23
SCN2A-213ENST00000636769 GORABQ5T7V8 394 aa7.35□□□□□ -1.23
SCN2A-213ENST00000636769 CAGE1Q8TC20 777 aa7.35□□□□□ -1.23
SCN2A-213ENST00000636769 TRIM29Q14134 588 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 OLFM4Q6UX06 510 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 GIMAP7Q8NHV1 300 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 NUP155O75694 1391 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 PDE3AQ14432 1141 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 RNF214Q8ND24 703 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 GBP3Q9H0R5 595 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 PIP4K2AP48426 406 aaPredicted RBP7.34□□□□□ -1.23
SCN2A-213ENST00000636769 HSP90AB3PQ58FF7 597 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 CCDC146Q8IYE0 955 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 RILPL2Q969X0 211 aa7.34□□□□□ -1.23
SCN2A-213ENST00000636769 CGNQ9P2M7 1197 aaKnown RBP7.34□□□□□ -1.23
SCN2A-213ENST00000636769 CCDC7Q96M83 1385 aa7.33□□□□□ -1.24
SCN2A-213ENST00000636769 SMG6Q86US8 1419 aaKnown RBP7.33□□□□□ -1.24
SCN2A-213ENST00000636769 USP47Q96K76 1375 aa7.33□□□□□ -1.24
SCN2A-213ENST00000636769 SMARCE1Q969G3 411 aa7.33□□□□□ -1.24
SCN2A-213ENST00000636769 VPS37CA5D8V6 355 aaPredicted RBP7.33□□□□□ -1.24
SCN2A-213ENST00000636769 HSP90AB4PQ58FF6 505 aa7.33□□□□□ -1.24
SCN2A-213ENST00000636769 SYNE3Q6ZMZ3 975 aa7.33□□□□□ -1.24
SCN2A-213ENST00000636769 CT47B1P0C2W7 299 aaPredicted RBP7.33□□□□□ -1.24
SCN2A-213ENST00000636769 AKAP17AQ02040 695 aaKnown RBP7.33□□□□□ -1.24
SCN2A-213ENST00000636769 NEXNQ0ZGT2 675 aa7.33□□□□□ -1.24
SCN2A-213ENST00000636769 AXDND1Q5T1B0 1012 aaPredicted RBP7.33□□□□□ -1.24
SCN2A-213ENST00000636769 CLCN1P35523 988 aa7.33□□□□□ -1.24
SCN2A-213ENST00000636769 RSPH4AQ5TD94 716 aa7.33□□□□□ -1.24
SCN2A-213ENST00000636769 TXLNBQ8N3L3 684 aa7.33□□□□□ -1.24
SCN2A-213ENST00000636769 ANO2Q9NQ90 1003 aa7.32□□□□□ -1.24
SCN2A-213ENST00000636769 PRIMPOLQ96LW4 560 aa7.32□□□□□ -1.24
SCN2A-213ENST00000636769 WASHC2AQ641Q2 1341 aa7.32□□□□□ -1.24
SCN2A-213ENST00000636769 WASHC2CQ9Y4E1 1318 aa7.32□□□□□ -1.24
SCN2A-213ENST00000636769 PRPF40AO75400 957 aaKnown RBP7.32□□□□□ -1.24
SCN2A-213ENST00000636769 IQCEQ6IPM2 695 aa7.32□□□□□ -1.24
SCN2A-213ENST00000636769 DNAJC2Q99543 621 aaKnown RBP7.32□□□□□ -1.24
SCN2A-213ENST00000636769 RAPGEF2Q9Y4G8 1499 aa7.32□□□□□ -1.24
SCN2A-213ENST00000636769 GOLGA6L10A6NI86 522 aa7.32□□□□□ -1.24
SCN2A-213ENST00000636769 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
SCN2A-213ENST00000636769 CPLX1O14810 134 aa7.32□□□□□ -1.24
SCN2A-213ENST00000636769 PDS5BQ9NTI5 1447 aa7.32□□□□□ -1.24
SCN2A-213ENST00000636769 TDRD9Q8NDG6 1382 aaKnown RBP7.32□□□□□ -1.24
SCN2A-213ENST00000636769 KINO60870 393 aaKnown RBP7.32□□□□□ -1.24
SCN2A-213ENST00000636769 WDR33Q9C0J8 1336 aaKnown RBP7.32□□□□□ -1.24
SCN2A-213ENST00000636769 TMCO3Q6UWJ1 677 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms