RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 TSPY10P0CW01 314 aa2.55□□□□□ -2
SYNGAP1-216ENST00000636640 IDI1Q13907 227 aa2.55□□□□□ -2
SYNGAP1-216ENST00000636640 DIP2AQ14689 1571 aa2.55□□□□□ -2
SYNGAP1-216ENST00000636640 ARHGAP31Q2M1Z3 1444 aa2.55□□□□□ -2
SYNGAP1-216ENST00000636640 NUTM2DQ5VT03 806 aaPredicted RBP2.55□□□□□ -2
SYNGAP1-216ENST00000636640 ANKLE2Q86XL3 938 aa2.55□□□□□ -2
SYNGAP1-216ENST00000636640 ERBINQ96RT1 1412 aa2.55□□□□□ -2
SYNGAP1-216ENST00000636640 SCAF1Q9H7N4 1312 aaKnown RBP2.55□□□□□ -2
SYNGAP1-216ENST00000636640 RGS17Q9UGC6 210 aaPredicted RBP2.55□□□□□ -2
SYNGAP1-216ENST00000636640 RGPD5Q99666 1765 aa2.54□□□□□ -2
SYNGAP1-216ENST00000636640 ABCA3Q99758 1704 aa2.54□□□□□ -2
SYNGAP1-216ENST00000636640 NEXMIFQ5QGS0 1516 aa2.54□□□□□ -2
SYNGAP1-216ENST00000636640 PTPRUQ92729 1446 aa2.54□□□□□ -2
SYNGAP1-216ENST00000636640 TMEM2Q9UHN6 1383 aa2.54□□□□□ -2
SYNGAP1-216ENST00000636640 SOCS7O14512 581 aa2.54□□□□□ -2
SYNGAP1-216ENST00000636640 FAM50AQ14320 339 aaKnown RBP2.54□□□□□ -2
SYNGAP1-216ENST00000636640 RSPH4AQ5TD94 716 aa2.54□□□□□ -2
SYNGAP1-216ENST00000636640 TXNDC2Q86VQ3 553 aa2.54□□□□□ -2
SYNGAP1-216ENST00000636640 THEMISQ8N1K5 641 aaPredicted RBP2.54□□□□□ -2
SYNGAP1-216ENST00000636640 SLC26A8Q96RN1 970 aa2.54□□□□□ -2
SYNGAP1-216ENST00000636640 LRP6O75581 1613 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 ADAMTS13Q76LX8 1427 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 ANKRD50Q9ULJ7 1429 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 RIMS2Q9UQ26 1411 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 ANKRD30AQ9BXX3 1397 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 ITGAEP38570 1179 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 KNDC1Q76NI1 1749 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 FMN2Q9NZ56 1722 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 CRYBG1Q9Y4K1 1723 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 LAMC1P11047 1609 aa2.53□□□□□ -2
SYNGAP1-216ENST00000636640 SETBP1Q9Y6X0 1596 aa2.53□□□□□ -2.01
SYNGAP1-216ENST00000636640 TMEM94Q12767 1356 aa2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 POTEAQ6S8J7 498 aa2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 PROSER2Q86WR7 435 aaPredicted RBP2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 DDX17Q92841 729 aaKnown RBP2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 PLCH1Q4KWH8 1693 aa2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 AHDC1Q5TGY3 1603 aaPredicted RBP2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 USP32Q8NFA0 1604 aa2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 TRPM2O94759 1503 aa2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 ASXL1Q8IXJ9 1541 aa2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 RPRD2Q5VT52 1461 aaKnown RBP2.52□□□□□ -2.01
SYNGAP1-216ENST00000636640 NAIPQ13075 1403 aa2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 ARHGEF28Q8N1W1 1705 aaKnown RBP2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 KANK1Q14678 1352 aa2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 TOM1O60784 492 aa2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 CHGAP10645 457 aaKnown RBP2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 KCNA6P17658 529 aa2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 SBF2Q86WG5 1849 aa2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 KAT6BQ8WYB5 2073 aa2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 NKTRP30414 1462 aaKnown RBP2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 NRAPQ86VF7 1730 aa2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 TRPM3Q9HCF6 1732 aaPredicted RBP2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 FAM135BQ49AJ0 1406 aa2.51□□□□□ -2.01
SYNGAP1-216ENST00000636640 NUP155O75694 1391 aa2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 METP08581 1390 aa2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 PLEKHG1Q9ULL1 1385 aa2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 COL22A1Q8NFW1 1626 aaPredicted RBP2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 APLP2Q06481 763 aa2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 FOXD1Q16676 465 aa2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 STAG3Q9UJ98 1225 aa2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 RGPD2P0DJD1 1756 aa2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 ALS2Q96Q42 1657 aa2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 MST1RQ04912 1400 aa2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 RRBP1Q9P2E9 1410 aaKnown RBP2.5□□□□□ -2.01
SYNGAP1-216ENST00000636640 ROCK1Q13464 1354 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 WNK3Q9BYP7 1800 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 EP400Q96L91 3159 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 ITSN1Q15811 1721 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 BCANQ96GW7 911 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 SLAIN2Q9P270 581 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 AMOTL2Q9Y2J4 779 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 EID1Q9Y6B2 187 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 PHRF1Q9P1Y6 1649 aaKnown RBP2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 VIRMAQ69YN4 1812 aaKnown RBP2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 AKAP12Q02952 1782 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 GLI3P10071 1580 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 MSH6P52701 1360 aa2.49□□□□□ -2.01
SYNGAP1-216ENST00000636640 TNS1Q9HBL0 1735 aaKnown RBP2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 NWD2Q9ULI1 1742 aa2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 KIF1AQ12756 1690 aa2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 TOPAZ1Q8N9V7 1692 aa2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 NUTM2BA6NNL0 878 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 NUTM2EB1AL46 878 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 BRINP3Q76B58 766 aa2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 NUTM2AQ8IVF1 878 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 PHF23Q9BUL5 403 aaPredicted RBP2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 SLC52A1Q9NWF4 448 aa2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 TBX22Q9Y458 520 aa2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 ROBO2Q9HCK4 1378 aa2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 PLEKHH1Q9ULM0 1364 aa2.48□□□□□ -2.01
SYNGAP1-216ENST00000636640 QRICH2Q9H0J4 1663 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 ADGRF5Q8IZF2 1346 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 C1orf167Q5SNV9 1468 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 PXDNQ92626 1479 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 LTN1O94822 1766 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 NUTM2FA1L443 756 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 PPP1R15AO75807 674 aaPredicted RBP2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 ZNF326Q5BKZ1 582 aaKnown RBP2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 TMEM132EQ6IEE7 984 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms