RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 STAC3Q96MF2 364 aa20.16■□□□□ 0.82
CLN5-209ENST00000636405 KNSTRNQ9Y448 316 aa20.15■□□□□ 0.82
CLN5-209ENST00000636405 NOS1P29475 1434 aa20.15■□□□□ 0.82
CLN5-209ENST00000636405 IQGAP1P46940 1657 aa20.15■□□□□ 0.82
CLN5-209ENST00000636405 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
CLN5-209ENST00000636405 HECW2Q9P2P5 1572 aa20.14■□□□□ 0.81
CLN5-209ENST00000636405 ABCA6Q8N139 1617 aa20.13■□□□□ 0.81
CLN5-209ENST00000636405 MROH2AA6NES4 1674 aa20.13■□□□□ 0.81
CLN5-209ENST00000636405 PPP4R2Q9NY27 417 aa20.12■□□□□ 0.81
CLN5-209ENST00000636405 TRAK1Q9UPV9 953 aa20.12■□□□□ 0.81
CLN5-209ENST00000636405 YEATS2Q9ULM3 1422 aa20.11■□□□□ 0.81
CLN5-209ENST00000636405 CFAP74Q9C0B2 1584 aa20.1■□□□□ 0.81
CLN5-209ENST00000636405 AMER1Q5JTC6 1135 aaPredicted RBP20.1■□□□□ 0.81
CLN5-209ENST00000636405 LMTK2Q8IWU2 1503 aa20.1■□□□□ 0.81
CLN5-209ENST00000636405 MAP3K4Q9Y6R4 1608 aa20.1■□□□□ 0.81
CLN5-209ENST00000636405 KIF1BO60333 1816 aa20.09■□□□□ 0.81
CLN5-209ENST00000636405 FAM69CQ0P6D2 419 aa20.09■□□□□ 0.81
CLN5-209ENST00000636405 EIF3AQ14152 1382 aaKnown RBP20.09■□□□□ 0.81
CLN5-209ENST00000636405 CDCA8Q53HL2 280 aa20.09■□□□□ 0.81
CLN5-209ENST00000636405 CDCA7LQ96GN5 454 aa20.09■□□□□ 0.81
CLN5-209ENST00000636405 NEO1Q92859 1461 aa20.07■□□□□ 0.8
CLN5-209ENST00000636405 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
CLN5-209ENST00000636405 MYOM2P54296 1465 aa20.07■□□□□ 0.8
CLN5-209ENST00000636405 ADAMTS8Q9UP79 889 aa20.06■□□□□ 0.8
CLN5-209ENST00000636405 ABCC3O15438 1527 aa20.06■□□□□ 0.8
CLN5-209ENST00000636405 RBM19Q9Y4C8 960 aaKnown RBP20.05■□□□□ 0.8
CLN5-209ENST00000636405 ERICH6BQ5W0A0 696 aa20.04■□□□□ 0.8
CLN5-209ENST00000636405 CARD14Q9BXL6 1004 aa20.04■□□□□ 0.8
CLN5-209ENST00000636405 ADGRB3O60242 1522 aa20.04■□□□□ 0.8
CLN5-209ENST00000636405 IDI1Q13907 227 aa20.03■□□□□ 0.8
CLN5-209ENST00000636405 ERVK-7P63135 1459 aa20.03■□□□□ 0.8
CLN5-209ENST00000636405 DIP2CQ9Y2E4 1556 aa20.03■□□□□ 0.8
CLN5-209ENST00000636405 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
CLN5-209ENST00000636405 NEURL4Q96JN8 1562 aa20.01■□□□□ 0.79
CLN5-209ENST00000636405 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
CLN5-209ENST00000636405 NRXN1Q9ULB1 1477 aa20■□□□□ 0.79
CLN5-209ENST00000636405 SIGLEC1Q9BZZ2 1709 aa20■□□□□ 0.79
CLN5-209ENST00000636405 IFT172Q9UG01 1749 aa20■□□□□ 0.79
CLN5-209ENST00000636405 FBXO31Q5XUX0 539 aaPredicted RBP20■□□□□ 0.79
CLN5-209ENST00000636405 RNF123Q5XPI4 1314 aa19.99■□□□□ 0.79
CLN5-209ENST00000636405 KIAA1210Q9ULL0 1709 aa19.99■□□□□ 0.79
CLN5-209ENST00000636405 SAFB2Q14151 953 aaKnown RBP eCLIP19.99■□□□□ 0.79
CLN5-209ENST00000636405 PIK3C2GO75747 1445 aa19.98■□□□□ 0.79
CLN5-209ENST00000636405 SLC12A5Q9H2X9 1139 aa19.98■□□□□ 0.79
CLN5-209ENST00000636405 SYNMO15061 1565 aa19.98■□□□□ 0.79
CLN5-209ENST00000636405 MYOM1P52179 1685 aa19.98■□□□□ 0.79
CLN5-209ENST00000636405 CAMSAP1Q5T5Y3 1602 aa19.97■□□□□ 0.79
CLN5-209ENST00000636405 RICTORQ6R327 1708 aa19.97■□□□□ 0.79
CLN5-209ENST00000636405 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
CLN5-209ENST00000636405 ASXL1Q8IXJ9 1541 aa19.96■□□□□ 0.79
CLN5-209ENST00000636405 STK26Q9P289 416 aa19.96■□□□□ 0.79
CLN5-209ENST00000636405 RCAN3Q9UKA8 241 aa19.96■□□□□ 0.79
CLN5-209ENST00000636405 RIMBP3CA6NJZ7 1639 aa19.95■□□□□ 0.78
CLN5-209ENST00000636405 RIMBP3BA6NNM3 1639 aa19.95■□□□□ 0.78
CLN5-209ENST00000636405 RIMBP3Q9UFD9 1639 aa19.95■□□□□ 0.78
CLN5-209ENST00000636405 TNNT2P45379 298 aaPredicted RBP19.95■□□□□ 0.78
CLN5-209ENST00000636405 CCDC146Q8IYE0 955 aa19.95■□□□□ 0.78
CLN5-209ENST00000636405 KDM5AP29375 1690 aaKnown RBP19.94■□□□□ 0.78
CLN5-209ENST00000636405 MLECQ14165 292 aa19.94■□□□□ 0.78
CLN5-209ENST00000636405 BLMP54132 1417 aaPredicted RBP19.94■□□□□ 0.78
CLN5-209ENST00000636405 RPGRIP1LQ68CZ1 1315 aa19.93■□□□□ 0.78
CLN5-209ENST00000636405 PPLO60437 1756 aa19.93■□□□□ 0.78
CLN5-209ENST00000636405 VGFO15240 615 aaPredicted RBP19.93■□□□□ 0.78
CLN5-209ENST00000636405 PLIN1O60240 522 aa19.92■□□□□ 0.78
CLN5-209ENST00000636405 RRP1P56182 461 aaKnown RBP19.92■□□□□ 0.78
CLN5-209ENST00000636405 CCDC136Q96JN2 1154 aa19.92■□□□□ 0.78
CLN5-209ENST00000636405 TSPOAP1O95153 1857 aa19.92■□□□□ 0.78
CLN5-209ENST00000636405 ADGRB1O14514 1584 aa19.91■□□□□ 0.78
CLN5-209ENST00000636405 PDE3BQ13370 1112 aa19.9■□□□□ 0.78
CLN5-209ENST00000636405 EXOC6Q8TAG9 804 aa19.9■□□□□ 0.78
CLN5-209ENST00000636405 PLEKHH1Q9ULM0 1364 aa19.89■□□□□ 0.77
CLN5-209ENST00000636405 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
CLN5-209ENST00000636405 CABP2Q9NPB3 220 aa19.88■□□□□ 0.77
CLN5-209ENST00000636405 SETBP1Q9Y6X0 1596 aa19.87■□□□□ 0.77
CLN5-209ENST00000636405 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
CLN5-209ENST00000636405 NEXMIFQ5QGS0 1516 aa19.86■□□□□ 0.77
CLN5-209ENST00000636405 NSD3Q9BZ95 1437 aa19.86■□□□□ 0.77
CLN5-209ENST00000636405 SBNO2Q9Y2G9 1366 aa19.86■□□□□ 0.77
CLN5-209ENST00000636405 GLI2P10070 1586 aa19.85■□□□□ 0.77
CLN5-209ENST00000636405 NPC1L1Q9UHC9 1359 aa19.85■□□□□ 0.77
CLN5-209ENST00000636405 ARHGAP31Q2M1Z3 1444 aa19.85■□□□□ 0.77
CLN5-209ENST00000636405 PIK3C2BO00750 1634 aa19.85■□□□□ 0.77
CLN5-209ENST00000636405 DIP2BQ9P265 1576 aa19.85■□□□□ 0.77
CLN5-209ENST00000636405 STAG3Q9UJ98 1225 aa19.84■□□□□ 0.77
CLN5-209ENST00000636405 APAF1O14727 1248 aa19.84■□□□□ 0.77
CLN5-209ENST00000636405 MORC1Q86VD1 984 aa19.83■□□□□ 0.77
CLN5-209ENST00000636405 MYO3AQ8NEV4 1616 aa19.83■□□□□ 0.77
CLN5-209ENST00000636405 QRICH2Q9H0J4 1663 aa19.83■□□□□ 0.76
CLN5-209ENST00000636405 ZMYM4Q5VZL5 1548 aa19.82■□□□□ 0.76
CLN5-209ENST00000636405 INSRP06213 1382 aa19.8■□□□□ 0.76
CLN5-209ENST00000636405 MINK1Q8N4C8 1332 aaPredicted RBP19.8■□□□□ 0.76
CLN5-209ENST00000636405 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
CLN5-209ENST00000636405 EVC2Q86UK5 1308 aa19.8■□□□□ 0.76
CLN5-209ENST00000636405 MYO5BQ9ULV0 1848 aa19.79■□□□□ 0.76
CLN5-209ENST00000636405 SRPK2P78362 688 aaKnown RBP19.78■□□□□ 0.76
CLN5-209ENST00000636405 DUSP27Q5VZP5 1158 aa19.78■□□□□ 0.76
CLN5-209ENST00000636405 PRAM1Q96QH2 718 aa19.78■□□□□ 0.76
CLN5-209ENST00000636405 C20orf194Q5TEA3 1177 aa19.78■□□□□ 0.76
CLN5-209ENST00000636405 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
CLN5-209ENST00000636405 PREX1Q8TCU6 1659 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms