RNA–Protein interactions for RNA: ENST00000636146.1

SYNGAP1-212, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-212ENST00000636146 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
SYNGAP1-212ENST00000636146 ADGRB3O60242 1522 aa11.91□□□□□ -0.5
SYNGAP1-212ENST00000636146 RPRD2Q5VT52 1461 aaKnown RBP11.9□□□□□ -0.5
SYNGAP1-212ENST00000636146 RBM33Q96EV2 1170 aaKnown RBP11.9□□□□□ -0.5
SYNGAP1-212ENST00000636146 MSH6P52701 1360 aa11.9□□□□□ -0.5
SYNGAP1-212ENST00000636146 NOS1P29475 1434 aa11.89□□□□□ -0.51
SYNGAP1-212ENST00000636146 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.89□□□□□ -0.51
SYNGAP1-212ENST00000636146 ALKQ9UM73 1620 aa11.88□□□□□ -0.51
SYNGAP1-212ENST00000636146 TET3O43151 1660 aa11.87□□□□□ -0.51
SYNGAP1-212ENST00000636146 RIMS2Q9UQ26 1411 aa11.86□□□□□ -0.51
SYNGAP1-212ENST00000636146 NUTM2DQ5VT03 806 aaPredicted RBP11.86□□□□□ -0.51
SYNGAP1-212ENST00000636146 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
SYNGAP1-212ENST00000636146 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
SYNGAP1-212ENST00000636146 NUP155O75694 1391 aa11.85□□□□□ -0.51
SYNGAP1-212ENST00000636146 PLEKHG1Q9ULL1 1385 aa11.85□□□□□ -0.51
SYNGAP1-212ENST00000636146 GCC2Q8IWJ2 1684 aa11.84□□□□□ -0.51
SYNGAP1-212ENST00000636146 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-212ENST00000636146 SLAIN2Q9P270 581 aa11.84□□□□□ -0.51
SYNGAP1-212ENST00000636146 ROCK1Q13464 1354 aa11.83□□□□□ -0.52
SYNGAP1-212ENST00000636146 ATF3P18847 181 aa11.83□□□□□ -0.52
SYNGAP1-212ENST00000636146 ZNF326Q5BKZ1 582 aaKnown RBP11.83□□□□□ -0.52
SYNGAP1-212ENST00000636146 TBX22Q9Y458 520 aa11.83□□□□□ -0.52
SYNGAP1-212ENST00000636146 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
SYNGAP1-212ENST00000636146 UNC13BO14795 1591 aa11.82□□□□□ -0.52
SYNGAP1-212ENST00000636146 MYO5BQ9ULV0 1848 aa11.81□□□□□ -0.52
SYNGAP1-212ENST00000636146 TMEM131LA2VDJ0 1609 aa11.81□□□□□ -0.52
SYNGAP1-212ENST00000636146 NWD1Q149M9 1564 aa11.8□□□□□ -0.52
SYNGAP1-212ENST00000636146 ZFYVE9O95405 1425 aa11.8□□□□□ -0.52
SYNGAP1-212ENST00000636146 MEX3CQ5U5Q3 659 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-212ENST00000636146 CADPS2Q86UW7 1296 aa11.8□□□□□ -0.52
SYNGAP1-212ENST00000636146 E9PCH4 1651 aa11.79□□□□□ -0.52
SYNGAP1-212ENST00000636146 IQGAP3Q86VI3 1631 aa11.78□□□□□ -0.52
SYNGAP1-212ENST00000636146 PHLPP1O60346 1717 aa11.78□□□□□ -0.52
SYNGAP1-212ENST00000636146 C19orf44Q9H6X5 657 aa11.78□□□□□ -0.52
SYNGAP1-212ENST00000636146 CHD2O14647 1828 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-212ENST00000636146 ACIN1Q9UKV3 1341 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-212ENST00000636146 JCADQ9P266 1359 aa11.78□□□□□ -0.52
SYNGAP1-212ENST00000636146 AMOTL2Q9Y2J4 779 aa11.77□□□□□ -0.53
SYNGAP1-212ENST00000636146 PIK3R4Q99570 1358 aa11.77□□□□□ -0.53
SYNGAP1-212ENST00000636146 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.53
SYNGAP1-212ENST00000636146 TRPM2O94759 1503 aa11.76□□□□□ -0.53
SYNGAP1-212ENST00000636146 DIP2AQ14689 1571 aa11.76□□□□□ -0.53
SYNGAP1-212ENST00000636146 TRIM52Q96A61 297 aa11.76□□□□□ -0.53
SYNGAP1-212ENST00000636146 RGS17Q9UGC6 210 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-212ENST00000636146 HFM1A2PYH4 1435 aa11.75□□□□□ -0.53
SYNGAP1-212ENST00000636146 HRCP23327 699 aa11.73□□□□□ -0.53
SYNGAP1-212ENST00000636146 POTEAQ6S8J7 498 aa11.73□□□□□ -0.53
SYNGAP1-212ENST00000636146 ADAMTS13Q76LX8 1427 aa11.73□□□□□ -0.53
SYNGAP1-212ENST00000636146 SPATA31A6Q5VVP1 1343 aa11.72□□□□□ -0.53
SYNGAP1-212ENST00000636146 SPHKAPQ2M3C7 1700 aa11.72□□□□□ -0.53
SYNGAP1-212ENST00000636146 SETD5Q9C0A6 1442 aa11.71□□□□□ -0.53
SYNGAP1-212ENST00000636146 NUTM2BA6NNL0 878 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-212ENST00000636146 NUTM2EB1AL46 878 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-212ENST00000636146 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-212ENST00000636146 NUTM2AQ8IVF1 878 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-212ENST00000636146 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.71□□□□□ -0.54
SYNGAP1-212ENST00000636146 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-212ENST00000636146 BRINP3Q76B58 766 aa11.68□□□□□ -0.54
SYNGAP1-212ENST00000636146 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-212ENST00000636146 COL16A1Q07092 1604 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-212ENST00000636146 CLSPNQ9HAW4 1339 aa11.67□□□□□ -0.54
SYNGAP1-212ENST00000636146 ZEB1P37275 1124 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-212ENST00000636146 LRRC59Q96AG4 307 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-212ENST00000636146 DCCP43146 1447 aa11.67□□□□□ -0.54
SYNGAP1-212ENST00000636146 NAIPQ13075 1403 aa11.67□□□□□ -0.54
SYNGAP1-212ENST00000636146 PTPRUQ92729 1446 aa11.67□□□□□ -0.54
SYNGAP1-212ENST00000636146 KIF1BO60333 1816 aa11.67□□□□□ -0.54
SYNGAP1-212ENST00000636146 SETBP1Q9Y6X0 1596 aa11.67□□□□□ -0.54
SYNGAP1-212ENST00000636146 METP08581 1390 aa11.66□□□□□ -0.54
SYNGAP1-212ENST00000636146 RAB3GAP2Q9H2M9 1393 aa11.66□□□□□ -0.54
SYNGAP1-212ENST00000636146 AHDC1Q5TGY3 1603 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-212ENST00000636146 RXRBP28702 533 aa11.65□□□□□ -0.54
SYNGAP1-212ENST00000636146 CLTCL1P53675 1640 aa11.64□□□□□ -0.55
SYNGAP1-212ENST00000636146 SHPRHQ149N8 1683 aa11.63□□□□□ -0.55
SYNGAP1-212ENST00000636146 ASXL1Q8IXJ9 1541 aa11.63□□□□□ -0.55
SYNGAP1-212ENST00000636146 XRN1Q8IZH2 1706 aaKnown RBP11.63□□□□□ -0.55
SYNGAP1-212ENST00000636146 RPGRIP1LQ68CZ1 1315 aa11.62□□□□□ -0.55
SYNGAP1-212ENST00000636146 ADGRL3Q9HAR2 1447 aa11.62□□□□□ -0.55
SYNGAP1-212ENST00000636146 NRXN3Q9Y4C0 1643 aa11.62□□□□□ -0.55
SYNGAP1-212ENST00000636146 C8orf37Q96NL8 207 aa11.62□□□□□ -0.55
SYNGAP1-212ENST00000636146 MST1RQ04912 1400 aa11.61□□□□□ -0.55
SYNGAP1-212ENST00000636146 NEXMIFQ5QGS0 1516 aa11.61□□□□□ -0.55
SYNGAP1-212ENST00000636146 LRP6O75581 1613 aa11.61□□□□□ -0.55
SYNGAP1-212ENST00000636146 AFF2P51816 1311 aa11.6□□□□□ -0.55
SYNGAP1-212ENST00000636146 SETD1AO15047 1707 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-212ENST00000636146 ADAMTS2O95450 1211 aa11.6□□□□□ -0.55
SYNGAP1-212ENST00000636146 RGL3Q3MIN7 710 aa11.6□□□□□ -0.55
SYNGAP1-212ENST00000636146 CCER1Q8TC90 406 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-212ENST00000636146 DDX17Q92841 729 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-212ENST00000636146 NGLY1Q96IV0 654 aa11.6□□□□□ -0.55
SYNGAP1-212ENST00000636146 DHX57Q6P158 1386 aaKnown RBP11.58□□□□□ -0.56
SYNGAP1-212ENST00000636146 QTRT2Q9H974 415 aaKnown RBP11.58□□□□□ -0.56
SYNGAP1-212ENST00000636146 STK26Q9P289 416 aa11.58□□□□□ -0.56
SYNGAP1-212ENST00000636146 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.56
SYNGAP1-212ENST00000636146 NALCNQ8IZF0 1738 aa11.57□□□□□ -0.56
SYNGAP1-212ENST00000636146 NHSL1Q5SYE7 1610 aa11.57□□□□□ -0.56
SYNGAP1-212ENST00000636146 FOXD1Q16676 465 aa11.57□□□□□ -0.56
SYNGAP1-212ENST00000636146 ESCO1Q5FWF5 840 aa11.57□□□□□ -0.56
SYNGAP1-212ENST00000636146 PTCH1Q13635 1447 aa11.57□□□□□ -0.56
SYNGAP1-212ENST00000636146 C1orf167Q5SNV9 1468 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms