RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 BCANQ96GW7 911 aa28.92■■■□□ 2.22
CLN6-212ENST00000636020 ADGRB3O60242 1522 aa28.89■■■□□ 2.21
CLN6-212ENST00000636020 LMTK2Q8IWU2 1503 aa28.89■■■□□ 2.21
CLN6-212ENST00000636020 NOS1P29475 1434 aa28.88■■■□□ 2.21
CLN6-212ENST00000636020 CDK12Q9NYV4 1490 aaPredicted RBP28.87■■■□□ 2.21
CLN6-212ENST00000636020 CHD2O14647 1828 aaKnown RBP28.87■■■□□ 2.21
CLN6-212ENST00000636020 NCOA3Q9Y6Q9 1424 aa28.86■■■□□ 2.21
CLN6-212ENST00000636020 SLC52A1Q9NWF4 448 aa28.85■■■□□ 2.21
CLN6-212ENST00000636020 ABCC5O15440 1437 aa28.85■■■□□ 2.21
CLN6-212ENST00000636020 AHDC1Q5TGY3 1603 aaPredicted RBP28.84■■■□□ 2.21
CLN6-212ENST00000636020 SHPRHQ149N8 1683 aa28.84■■■□□ 2.21
CLN6-212ENST00000636020 PLEKHG1Q9ULL1 1385 aa28.84■■■□□ 2.21
CLN6-212ENST00000636020 KANK4Q5T7N3 995 aaPredicted RBP28.83■■■□□ 2.21
CLN6-212ENST00000636020 ZFYVE9O95405 1425 aa28.81■■■□□ 2.2
CLN6-212ENST00000636020 CADPS2Q86UW7 1296 aa28.8■■■□□ 2.2
CLN6-212ENST00000636020 TBX22Q9Y458 520 aa28.8■■■□□ 2.2
CLN6-212ENST00000636020 C14orf37Q86TY3 774 aa28.79■■■□□ 2.2
CLN6-212ENST00000636020 C19orf44Q9H6X5 657 aa28.78■■■□□ 2.2
CLN6-212ENST00000636020 CROCC2H7BZ55 1655 aa28.77■■■□□ 2.2
CLN6-212ENST00000636020 NUTM2BA6NNL0 878 aaPredicted RBP28.77■■■□□ 2.2
CLN6-212ENST00000636020 NUTM2EB1AL46 878 aaPredicted RBP28.77■■■□□ 2.2
CLN6-212ENST00000636020 NUTM2AQ8IVF1 878 aaPredicted RBP28.77■■■□□ 2.2
CLN6-212ENST00000636020 AFF2P51816 1311 aa28.75■■■□□ 2.19
CLN6-212ENST00000636020 ATF3P18847 181 aa28.75■■■□□ 2.19
CLN6-212ENST00000636020 HDGFP51858 240 aaKnown RBP28.75■■■□□ 2.19
CLN6-212ENST00000636020 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.74■■■□□ 2.19
CLN6-212ENST00000636020 PPP1R15AO75807 674 aaPredicted RBP28.74■■■□□ 2.19
CLN6-212ENST00000636020 RIMS2Q9UQ26 1411 aa28.74■■■□□ 2.19
CLN6-212ENST00000636020 DIP2AQ14689 1571 aa28.74■■■□□ 2.19
CLN6-212ENST00000636020 BRINP3Q76B58 766 aa28.72■■■□□ 2.19
CLN6-212ENST00000636020 DAPK1P53355 1430 aa28.71■■■□□ 2.19
CLN6-212ENST00000636020 VPS8Q8N3P4 1428 aa28.71■■■□□ 2.19
CLN6-212ENST00000636020 MYO5BQ9ULV0 1848 aa28.69■■■□□ 2.18
CLN6-212ENST00000636020 RGS12O14924 1447 aa28.68■■■□□ 2.18
CLN6-212ENST00000636020 ANKRD30AQ9BXX3 1397 aa28.67■■■□□ 2.18
CLN6-212ENST00000636020 ADAMTS13Q76LX8 1427 aa28.67■■■□□ 2.18
CLN6-212ENST00000636020 RBM6P78332 1123 aaKnown RBP28.66■■■□□ 2.18
CLN6-212ENST00000636020 CHIC2Q9UKJ5 165 aa28.66■■■□□ 2.18
CLN6-212ENST00000636020 RPRD2Q5VT52 1461 aaKnown RBP28.66■■■□□ 2.18
CLN6-212ENST00000636020 PTPN23Q9H3S7 1636 aa28.65■■■□□ 2.18
CLN6-212ENST00000636020 PIK3R4Q99570 1358 aa28.65■■■□□ 2.18
CLN6-212ENST00000636020 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.65■■■□□ 2.18
CLN6-212ENST00000636020 QTRT2Q9H974 415 aaKnown RBP28.65■■■□□ 2.18
CLN6-212ENST00000636020 SETD5Q9C0A6 1442 aa28.64■■■□□ 2.18
CLN6-212ENST00000636020 TMEM131LA2VDJ0 1609 aa28.64■■■□□ 2.18
CLN6-212ENST00000636020 GCC2Q8IWJ2 1684 aa28.61■■■□□ 2.17
CLN6-212ENST00000636020 NUTM2DQ5VT03 806 aaPredicted RBP28.61■■■□□ 2.17
CLN6-212ENST00000636020 C8orf37Q96NL8 207 aa28.59■■■□□ 2.17
CLN6-212ENST00000636020 LRRC59Q96AG4 307 aaKnown RBP28.58■■■□□ 2.17
CLN6-212ENST00000636020 AMOTL2Q9Y2J4 779 aa28.58■■■□□ 2.17
CLN6-212ENST00000636020 ASXL1Q8IXJ9 1541 aa28.58■■■□□ 2.17
CLN6-212ENST00000636020 DCCP43146 1447 aa28.57■■■□□ 2.16
CLN6-212ENST00000636020 PTPRUQ92729 1446 aa28.55■■■□□ 2.16
CLN6-212ENST00000636020 CHGAP10645 457 aaKnown RBP28.55■■■□□ 2.16
CLN6-212ENST00000636020 NHSL1Q5SYE7 1610 aa28.52■■■□□ 2.16
CLN6-212ENST00000636020 MST1RQ04912 1400 aa28.52■■■□□ 2.16
CLN6-212ENST00000636020 ATAD2Q6PL18 1390 aa28.51■■■□□ 2.16
CLN6-212ENST00000636020 PNPLA6Q8IY17 1366 aa28.51■■■□□ 2.16
CLN6-212ENST00000636020 NGLY1Q96IV0 654 aa28.51■■■□□ 2.15
CLN6-212ENST00000636020 TRPM2O94759 1503 aa28.5■■■□□ 2.15
CLN6-212ENST00000636020 ZRANB1Q9UGI0 708 aa28.5■■■□□ 2.15
CLN6-212ENST00000636020 ADGRL2O95490 1459 aa28.48■■■□□ 2.15
CLN6-212ENST00000636020 EP400Q96L91 3159 aa28.47■■■□□ 2.15
CLN6-212ENST00000636020 FOXD1Q16676 465 aa28.47■■■□□ 2.15
CLN6-212ENST00000636020 DDX17Q92841 729 aaKnown RBP28.47■■■□□ 2.15
CLN6-212ENST00000636020 ANKRD50Q9ULJ7 1429 aa28.45■■■□□ 2.15
CLN6-212ENST00000636020 ADAMTS2O95450 1211 aa28.43■■■□□ 2.14
CLN6-212ENST00000636020 UNC13BO14795 1591 aa28.41■■■□□ 2.14
CLN6-212ENST00000636020 SETBP1Q9Y6X0 1596 aa28.41■■■□□ 2.14
CLN6-212ENST00000636020 XRN1Q8IZH2 1706 aaKnown RBP28.4■■■□□ 2.14
CLN6-212ENST00000636020 USP21Q9UK80 565 aa28.38■■■□□ 2.13
CLN6-212ENST00000636020 TRPC5Q9UL62 973 aaPredicted RBP28.38■■■□□ 2.13
CLN6-212ENST00000636020 FNBP4Q8N3X1 1017 aaPredicted RBP28.35■■■□□ 2.13
CLN6-212ENST00000636020 CCDC125Q86Z20 511 aa28.34■■■□□ 2.13
CLN6-212ENST00000636020 E9PCH4 1651 aa28.34■■■□□ 2.13
CLN6-212ENST00000636020 ADGRL3Q9HAR2 1447 aa28.34■■■□□ 2.13
CLN6-212ENST00000636020 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
CLN6-212ENST00000636020 NRXN3Q9Y4C0 1643 aa28.32■■■□□ 2.12
CLN6-212ENST00000636020 APLP2Q06481 763 aa28.32■■■□□ 2.12
CLN6-212ENST00000636020 METP08581 1390 aa28.31■■■□□ 2.12
CLN6-212ENST00000636020 ATRNO75882 1429 aa28.31■■■□□ 2.12
CLN6-212ENST00000636020 SOS2Q07890 1332 aaPredicted RBP28.29■■■□□ 2.12
CLN6-212ENST00000636020 C1orf167Q5SNV9 1468 aa28.28■■■□□ 2.12
CLN6-212ENST00000636020 PTCH1Q13635 1447 aa28.28■■■□□ 2.12
CLN6-212ENST00000636020 LAMC1P11047 1609 aa28.27■■■□□ 2.12
CLN6-212ENST00000636020 FAM50AQ14320 339 aaKnown RBP28.25■■■□□ 2.11
CLN6-212ENST00000636020 NALCNQ8IZF0 1738 aa28.25■■■□□ 2.11
CLN6-212ENST00000636020 ORAI2Q96SN7 254 aa28.22■■■□□ 2.11
CLN6-212ENST00000636020 IQGAP3Q86VI3 1631 aa28.2■■■□□ 2.1
CLN6-212ENST00000636020 BCL9LQ86UU0 1499 aa28.18■■■□□ 2.1
CLN6-212ENST00000636020 ZNF326Q5BKZ1 582 aaKnown RBP28.16■■■□□ 2.1
CLN6-212ENST00000636020 COL22A1Q8NFW1 1626 aaPredicted RBP28.15■■■□□ 2.1
CLN6-212ENST00000636020 GJD4Q96KN9 370 aaPredicted RBP28.15■■■□□ 2.1
CLN6-212ENST00000636020 MYOM2P54296 1465 aa28.14■■■□□ 2.09
CLN6-212ENST00000636020 NUP155O75694 1391 aa28.13■■■□□ 2.09
CLN6-212ENST00000636020 BLMP54132 1417 aaPredicted RBP28.11■■■□□ 2.09
CLN6-212ENST00000636020 DEFB132Q7Z7B7 95 aa28.07■■■□□ 2.08
CLN6-212ENST00000636020 ROCK1Q13464 1354 aa28.07■■■□□ 2.08
CLN6-212ENST00000636020 ROBO2Q9HCK4 1378 aa28.07■■■□□ 2.08
CLN6-212ENST00000636020 NEXMIFQ5QGS0 1516 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms