RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 WDR7Q9Y4E6 1490 aa19.21■□□□□ 0.66
CACNA1A-220ENST00000635988 PIK3C2GO75747 1445 aa19.2■□□□□ 0.66
CACNA1A-220ENST00000635988 MAGI2Q86UL8 1455 aa19.18■□□□□ 0.66
CACNA1A-220ENST00000635988 TRMT2AQ8IZ69 625 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-220ENST00000635988 NPC1L1Q9UHC9 1359 aa19.17■□□□□ 0.66
CACNA1A-220ENST00000635988 AMER1Q5JTC6 1135 aaPredicted RBP19.17■□□□□ 0.66
CACNA1A-220ENST00000635988 CDC42BPBQ9Y5S2 1711 aa19.17■□□□□ 0.66
CACNA1A-220ENST00000635988 NGEFQ8N5V2 710 aa19.17■□□□□ 0.66
CACNA1A-220ENST00000635988 RGS3P49796 1198 aa19.16■□□□□ 0.66
CACNA1A-220ENST00000635988 SYNMO15061 1565 aa19.16■□□□□ 0.66
CACNA1A-220ENST00000635988 FRAT2O75474 233 aaPredicted RBP19.16■□□□□ 0.66
CACNA1A-220ENST00000635988 NKTRP30414 1462 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-220ENST00000635988 PLXNC1O60486 1568 aa19.15■□□□□ 0.66
CACNA1A-220ENST00000635988 ASXL1Q8IXJ9 1541 aa19.15■□□□□ 0.66
CACNA1A-220ENST00000635988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.66
CACNA1A-220ENST00000635988 FBLN2P98095 1184 aa19.14■□□□□ 0.65
CACNA1A-220ENST00000635988 STAC3Q96MF2 364 aa19.14■□□□□ 0.65
CACNA1A-220ENST00000635988 ABCC2Q92887 1545 aa19.14■□□□□ 0.65
CACNA1A-220ENST00000635988 NINLQ9Y2I6 1382 aa19.13■□□□□ 0.65
CACNA1A-220ENST00000635988 E9PSI1 815 aa19.12■□□□□ 0.65
CACNA1A-220ENST00000635988 SYCP2Q9BX26 1530 aa19.12■□□□□ 0.65
CACNA1A-220ENST00000635988 CGNL1Q0VF96 1302 aa19.12■□□□□ 0.65
CACNA1A-220ENST00000635988 MAPK8IP3Q9UPT6 1336 aa19.12■□□□□ 0.65
CACNA1A-220ENST00000635988 FAM43AQ8N2R8 423 aa19.12■□□□□ 0.65
CACNA1A-220ENST00000635988 BECN1Q14457 450 aa19.11■□□□□ 0.65
CACNA1A-220ENST00000635988 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-220ENST00000635988 DUOX2Q9NRD8 1548 aa19.11■□□□□ 0.65
CACNA1A-220ENST00000635988 IQGAP1P46940 1657 aa19.11■□□□□ 0.65
CACNA1A-220ENST00000635988 VIRMAQ69YN4 1812 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-220ENST00000635988 PDE3AQ14432 1141 aa19.1■□□□□ 0.65
CACNA1A-220ENST00000635988 UBE2Q2Q8WVN8 375 aa19.1■□□□□ 0.65
CACNA1A-220ENST00000635988 SCAF11Q99590 1463 aaKnown RBP19.08■□□□□ 0.65
CACNA1A-220ENST00000635988 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.64
CACNA1A-220ENST00000635988 SCAPERQ9BY12 1400 aa19.07■□□□□ 0.64
CACNA1A-220ENST00000635988 MADDQ8WXG6 1647 aa19.07■□□□□ 0.64
CACNA1A-220ENST00000635988 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
CACNA1A-220ENST00000635988 AAMPQ13685 434 aa19.06■□□□□ 0.64
CACNA1A-220ENST00000635988 RSPH6AQ9H0K4 717 aa19.06■□□□□ 0.64
CACNA1A-220ENST00000635988 USP19O94966 1318 aa19.05■□□□□ 0.64
CACNA1A-220ENST00000635988 APAF1O14727 1248 aa19.05■□□□□ 0.64
CACNA1A-220ENST00000635988 ZMYM3Q14202 1370 aa19.04■□□□□ 0.64
CACNA1A-220ENST00000635988 BCAR3O75815 825 aa19.04■□□□□ 0.64
CACNA1A-220ENST00000635988 IGHDP01880 384 aa19.03■□□□□ 0.64
CACNA1A-220ENST00000635988 CCDC146Q8IYE0 955 aa19.03■□□□□ 0.64
CACNA1A-220ENST00000635988 CLUAP1Q96AJ1 413 aa19.03■□□□□ 0.64
CACNA1A-220ENST00000635988 SPINK5Q9NQ38 1064 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-220ENST00000635988 L1TD1Q5T7N2 865 aaKnown RBP19.02■□□□□ 0.63
CACNA1A-220ENST00000635988 CENPJQ9HC77 1338 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-220ENST00000635988 UPF2Q9HAU5 1272 aaKnown RBP19■□□□□ 0.63
CACNA1A-220ENST00000635988 MYOM1P52179 1685 aa19■□□□□ 0.63
CACNA1A-220ENST00000635988 SPHKAPQ2M3C7 1700 aa18.99■□□□□ 0.63
CACNA1A-220ENST00000635988 TTC37Q6PGP7 1564 aa18.99■□□□□ 0.63
CACNA1A-220ENST00000635988 CANXP27824 592 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-220ENST00000635988 PMFBP1Q8TBY8 1022 aa18.99■□□□□ 0.63
CACNA1A-220ENST00000635988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.99■□□□□ 0.63
CACNA1A-220ENST00000635988 KDM5AP29375 1690 aaKnown RBP18.98■□□□□ 0.63
CACNA1A-220ENST00000635988 TRPM2O94759 1503 aa18.97■□□□□ 0.63
CACNA1A-220ENST00000635988 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-220ENST00000635988 NLRP1Q9C000 1473 aa18.95■□□□□ 0.62
CACNA1A-220ENST00000635988 POGKQ9P215 609 aa18.95■□□□□ 0.62
CACNA1A-220ENST00000635988 KIAA1210Q9ULL0 1709 aa18.95■□□□□ 0.62
CACNA1A-220ENST00000635988 CEP152O94986 1710 aa18.94■□□□□ 0.62
CACNA1A-220ENST00000635988 SEC24BO95487 1268 aa18.94■□□□□ 0.62
CACNA1A-220ENST00000635988 COG6Q9Y2V7 657 aa18.94■□□□□ 0.62
CACNA1A-220ENST00000635988 POLR3AO14802 1390 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-220ENST00000635988 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
CACNA1A-220ENST00000635988 WWC1Q8IX03 1113 aa18.93■□□□□ 0.62
CACNA1A-220ENST00000635988 PTPRTO14522 1441 aa18.93■□□□□ 0.62
CACNA1A-220ENST00000635988 PANK1Q8TE04 598 aa18.92■□□□□ 0.62
CACNA1A-220ENST00000635988 TBC1D32Q96NH3 1257 aa18.92■□□□□ 0.62
CACNA1A-220ENST00000635988 SLKQ9H2G2 1235 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-220ENST00000635988 DMRT2Q9Y5R5 561 aa18.91■□□□□ 0.62
CACNA1A-220ENST00000635988 NEURL4Q96JN8 1562 aa18.89■□□□□ 0.62
CACNA1A-220ENST00000635988 EFCAB2Q5VUJ9 269 aa18.88■□□□□ 0.61
CACNA1A-220ENST00000635988 PLCH2O75038 1416 aa18.88■□□□□ 0.61
CACNA1A-220ENST00000635988 RARSP54136 660 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-220ENST00000635988 RWDD1Q9H446 243 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-220ENST00000635988 ERVK-7P63135 1459 aa18.87■□□□□ 0.61
CACNA1A-220ENST00000635988 CLTCL1P53675 1640 aa18.87■□□□□ 0.61
CACNA1A-220ENST00000635988 WDR63Q8IWG1 891 aa18.87■□□□□ 0.61
CACNA1A-220ENST00000635988 TBC1D2Q9BYX2 928 aa18.87■□□□□ 0.61
CACNA1A-220ENST00000635988 RUNDC1Q96C34 613 aa18.85■□□□□ 0.61
CACNA1A-220ENST00000635988 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
CACNA1A-220ENST00000635988 PDZRN3Q9UPQ7 1066 aa18.84■□□□□ 0.61
CACNA1A-220ENST00000635988 RTEL1-TNFRSF6BF6WH68 1400 aa18.84■□□□□ 0.61
CACNA1A-220ENST00000635988 SHROOM2Q13796 1616 aa18.84■□□□□ 0.61
CACNA1A-220ENST00000635988 ABCC1P33527 1531 aa18.84■□□□□ 0.61
CACNA1A-220ENST00000635988 SBNO2Q9Y2G9 1366 aa18.84■□□□□ 0.61
CACNA1A-220ENST00000635988 NCBP3Q53F19 620 aaKnown RBP18.83■□□□□ 0.61
CACNA1A-220ENST00000635988 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-220ENST00000635988 PCDHB15Q9Y5E8 787 aa18.83■□□□□ 0.61
CACNA1A-220ENST00000635988 MYOM2P54296 1465 aa18.83■□□□□ 0.6
CACNA1A-220ENST00000635988 GOLGA6L3A6NEY3 463 aa18.83■□□□□ 0.6
CACNA1A-220ENST00000635988 TET3O43151 1660 aa18.83■□□□□ 0.6
CACNA1A-220ENST00000635988 KANK1Q14678 1352 aa18.82■□□□□ 0.6
CACNA1A-220ENST00000635988 CCDC27Q2M243 656 aa18.82■□□□□ 0.6
CACNA1A-220ENST00000635988 MCM4P33991 863 aa18.81■□□□□ 0.6
CACNA1A-220ENST00000635988 FSD2A1L4K1 749 aa18.8■□□□□ 0.6
CACNA1A-220ENST00000635988 RRAGDQ9NQL2 400 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-220ENST00000635988 SPAG9O60271 1321 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms