RNA–Protein interactions for RNA: ENST00000635966.1

LINC00598-209, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,148 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-209ENST00000635966 COL17A1Q9UMD9 1497 aaPredicted RBP10.74□□□□□ -0.69
LINC00598-209ENST00000635966 FBXW7Q969H0 707 aa10.74□□□□□ -0.69
LINC00598-209ENST00000635966 AXIN2Q9Y2T1 843 aa10.74□□□□□ -0.69
LINC00598-209ENST00000635966 TEX14Q8IWB6 1497 aa10.74□□□□□ -0.69
LINC00598-209ENST00000635966 EPRSP07814 1512 aaKnown RBP10.74□□□□□ -0.69
LINC00598-209ENST00000635966 KDM5BQ9UGL1 1544 aa10.74□□□□□ -0.69
LINC00598-209ENST00000635966 NBR1Q14596 966 aa10.73□□□□□ -0.69
LINC00598-209ENST00000635966 KCNK17Q96T54 332 aa10.73□□□□□ -0.69
LINC00598-209ENST00000635966 KRTAP3-3Q9BYR6 98 aa10.73□□□□□ -0.69
LINC00598-209ENST00000635966 KRTAP3-2Q9BYR7 98 aa10.73□□□□□ -0.69
LINC00598-209ENST00000635966 IQGAP2Q13576 1575 aa10.73□□□□□ -0.69
LINC00598-209ENST00000635966 PTPREP23469 700 aa10.72□□□□□ -0.69
LINC00598-209ENST00000635966 ANKRD13DQ6ZTN6 518 aa10.72□□□□□ -0.69
LINC00598-209ENST00000635966 BCL2L12Q9HB09 334 aa10.72□□□□□ -0.69
LINC00598-209ENST00000635966 TTBK1Q5TCY1 1321 aaPredicted RBP10.72□□□□□ -0.69
LINC00598-209ENST00000635966 FAM9AQ8IZU1 332 aaPredicted RBP10.71□□□□□ -0.69
LINC00598-209ENST00000635966 DISP1Q96F81 1524 aa10.71□□□□□ -0.69
LINC00598-209ENST00000635966 MAP3K4Q9Y6R4 1608 aa10.71□□□□□ -0.69
LINC00598-209ENST00000635966 PSEN2P49810 448 aa10.7□□□□□ -0.7
LINC00598-209ENST00000635966 RBM33Q96EV2 1170 aaKnown RBP10.7□□□□□ -0.7
LINC00598-209ENST00000635966 ADAM33Q9BZ11 813 aa10.7□□□□□ -0.7
LINC00598-209ENST00000635966 LSM11P83369 360 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC00598-209ENST00000635966 HECW2Q9P2P5 1572 aa10.69□□□□□ -0.7
LINC00598-209ENST00000635966 UGGT2Q9NYU1 1516 aa10.68□□□□□ -0.7
LINC00598-209ENST00000635966 MAP3K7O43318 606 aa10.68□□□□□ -0.7
LINC00598-209ENST00000635966 POTEEQ6S8J3 1075 aa10.67□□□□□ -0.7
LINC00598-209ENST00000635966 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
LINC00598-209ENST00000635966 WDR7Q9Y4E6 1490 aa10.66□□□□□ -0.7
LINC00598-209ENST00000635966 KIF21BO75037 1637 aa10.66□□□□□ -0.7
LINC00598-209ENST00000635966 MAGI3Q5TCQ9 1506 aa10.65□□□□□ -0.7
LINC00598-209ENST00000635966 SLC24A1O60721 1099 aa10.65□□□□□ -0.7
LINC00598-209ENST00000635966 PRXQ9BXM0 1461 aa10.65□□□□□ -0.7
LINC00598-209ENST00000635966 ZCCHC11Q5TAX3 1644 aaKnown RBP10.65□□□□□ -0.7
LINC00598-209ENST00000635966 RAPGEF2Q9Y4G8 1499 aa10.64□□□□□ -0.71
LINC00598-209ENST00000635966 SEMA3EO15041 775 aa10.64□□□□□ -0.71
LINC00598-209ENST00000635966 EN1Q05925 392 aaPredicted RBP10.64□□□□□ -0.71
LINC00598-209ENST00000635966 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
LINC00598-209ENST00000635966 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
LINC00598-209ENST00000635966 MLLT3P42568 568 aaPredicted RBP10.63□□□□□ -0.71
LINC00598-209ENST00000635966 DMRTA1Q5VZB9 504 aa10.63□□□□□ -0.71
LINC00598-209ENST00000635966 SMYD5Q6GMV2 418 aa10.63□□□□□ -0.71
LINC00598-209ENST00000635966 STAC3Q96MF2 364 aa10.63□□□□□ -0.71
LINC00598-209ENST00000635966 CD109Q6YHK3 1445 aa10.63□□□□□ -0.71
LINC00598-209ENST00000635966 GOLGA3Q08378 1498 aa10.62□□□□□ -0.71
LINC00598-209ENST00000635966 KIAA0556O60303 1618 aa10.62□□□□□ -0.71
LINC00598-209ENST00000635966 PPP1R3GB7ZBB8 358 aa10.61□□□□□ -0.71
LINC00598-209ENST00000635966 OSBPP22059 807 aa10.61□□□□□ -0.71
LINC00598-209ENST00000635966 SPNS2Q8IVW8 549 aa10.61□□□□□ -0.71
LINC00598-209ENST00000635966 TK2O00142 265 aa10.6□□□□□ -0.71
LINC00598-209ENST00000635966 ADGRD1Q6QNK2 874 aa10.6□□□□□ -0.71
LINC00598-209ENST00000635966 FBXO41Q8TF61 875 aa10.6□□□□□ -0.71
LINC00598-209ENST00000635966 CFAP43Q8NDM7 1665 aa10.59□□□□□ -0.71
LINC00598-209ENST00000635966 PHLDB1Q86UU1 1377 aa10.58□□□□□ -0.72
LINC00598-209ENST00000635966 TULP1O00294 542 aaPredicted RBP10.58□□□□□ -0.72
LINC00598-209ENST00000635966 TSR1Q2NL82 804 aaKnown RBP10.58□□□□□ -0.72
LINC00598-209ENST00000635966 ARAP3Q8WWN8 1544 aa10.58□□□□□ -0.72
LINC00598-209ENST00000635966 COL9A1P20849 921 aa10.57□□□□□ -0.72
LINC00598-209ENST00000635966 ABCA8O94911 1581 aa10.56□□□□□ -0.72
LINC00598-209ENST00000635966 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
LINC00598-209ENST00000635966 CERKQ8TCT0 537 aa10.56□□□□□ -0.72
LINC00598-209ENST00000635966 ZBED2Q9BTP6 218 aa10.56□□□□□ -0.72
LINC00598-209ENST00000635966 SLC4A5Q9BY07 1137 aa10.56□□□□□ -0.72
LINC00598-209ENST00000635966 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
LINC00598-209ENST00000635966 NUTM2FA1L443 756 aa10.54□□□□□ -0.72
LINC00598-209ENST00000635966 PRIM1P49642 420 aaKnown RBP10.54□□□□□ -0.72
LINC00598-209ENST00000635966 MYT1LQ9UL68 1186 aa10.54□□□□□ -0.72
LINC00598-209ENST00000635966 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
LINC00598-209ENST00000635966 PROX2Q3B8N5 592 aa10.52□□□□□ -0.73
LINC00598-209ENST00000635966 NBPF3Q9H094 633 aa10.52□□□□□ -0.73
LINC00598-209ENST00000635966 PTPRMP28827 1452 aa10.52□□□□□ -0.73
LINC00598-209ENST00000635966 MMRN1Q13201 1228 aa10.51□□□□□ -0.73
LINC00598-209ENST00000635966 CDHR5Q9HBB8 845 aa10.51□□□□□ -0.73
LINC00598-209ENST00000635966 ADAMTSL3P82987 1691 aa10.5□□□□□ -0.73
LINC00598-209ENST00000635966 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
LINC00598-209ENST00000635966 ATP10BO94823 1461 aa10.49□□□□□ -0.73
LINC00598-209ENST00000635966 GOLGA8CPA6NN73 597 aa10.49□□□□□ -0.73
LINC00598-209ENST00000635966 TRIM6-TRIM34B2RNG4 842 aa10.49□□□□□ -0.73
LINC00598-209ENST00000635966 HRO43593 1189 aa10.49□□□□□ -0.73
LINC00598-209ENST00000635966 PACS2Q86VP3 889 aa10.49□□□□□ -0.73
LINC00598-209ENST00000635966 MRPL50Q8N5N7 158 aaKnown RBP10.49□□□□□ -0.73
LINC00598-209ENST00000635966 RABGEF1Q9UJ41 708 aa10.49□□□□□ -0.73
LINC00598-209ENST00000635966 CEP162Q5TB80 1403 aa10.49□□□□□ -0.73
LINC00598-209ENST00000635966 NEO1Q92859 1461 aa10.49□□□□□ -0.73
LINC00598-209ENST00000635966 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
LINC00598-209ENST00000635966 PRSS12P56730 875 aa10.48□□□□□ -0.73
LINC00598-209ENST00000635966 RNF166Q96A37 237 aaPredicted RBP10.48□□□□□ -0.73
LINC00598-209ENST00000635966 CDCA7LQ96GN5 454 aa10.48□□□□□ -0.73
LINC00598-209ENST00000635966 KIAA1468Q9P260 1216 aa10.48□□□□□ -0.73
LINC00598-209ENST00000635966 ABCA9Q8IUA7 1624 aa10.47□□□□□ -0.73
LINC00598-209ENST00000635966 RAPGEF3O95398 923 aa10.47□□□□□ -0.73
LINC00598-209ENST00000635966 RBM26Q5T8P6 1007 aaKnown RBP10.47□□□□□ -0.73
LINC00598-209ENST00000635966 PCF11O94913 1555 aaKnown RBP10.45□□□□□ -0.74
LINC00598-209ENST00000635966 LMTK3Q96Q04 1460 aa10.44□□□□□ -0.74
LINC00598-209ENST00000635966 BHMG1C9JSJ3 638 aaPredicted RBP10.44□□□□□ -0.74
LINC00598-209ENST00000635966 FCHSD2O94868 740 aa10.44□□□□□ -0.74
LINC00598-209ENST00000635966 BCORL1Q5H9F3 1711 aa10.44□□□□□ -0.74
LINC00598-209ENST00000635966 CLIP1P30622 1438 aa10.43□□□□□ -0.74
LINC00598-209ENST00000635966 PTGDRQ13258 359 aa10.43□□□□□ -0.74
LINC00598-209ENST00000635966 NPDC1Q9NQX5 325 aaPredicted RBP10.43□□□□□ -0.74
LINC00598-209ENST00000635966 RBM27Q9P2N5 1060 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms