RNA–Protein interactions for RNA: ENST00000635786.1

CACNA1A-217, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-217ENST00000635786 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-217ENST00000635786 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
CACNA1A-217ENST00000635786 ANP32AP39687 249 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-217ENST00000635786 REPIN1Q9BWE0 567 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-217ENST00000635786 PATL2C9JE40 543 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-217ENST00000635786 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
CACNA1A-217ENST00000635786 IGF1RP08069 1367 aa13.63□□□□□ -0.23
CACNA1A-217ENST00000635786 RBM27Q9P2N5 1060 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-217ENST00000635786 ATP1B4Q9UN42 357 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-217ENST00000635786 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-217ENST00000635786 GDPD2Q9HCC8 539 aa13.62□□□□□ -0.23
CACNA1A-217ENST00000635786 CANXP27824 592 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-217ENST00000635786 AMHR2Q16671 573 aa13.62□□□□□ -0.23
CACNA1A-217ENST00000635786 ZNF16P17020 682 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-217ENST00000635786 FECHP22830 423 aa13.61□□□□□ -0.23
CACNA1A-217ENST00000635786 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-217ENST00000635786 B4GALNT3Q6L9W6 998 aa13.6□□□□□ -0.23
CACNA1A-217ENST00000635786 NAP1L5Q96NT1 182 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-217ENST00000635786 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
CACNA1A-217ENST00000635786 SUGT1Q9Y2Z0 365 aa13.59□□□□□ -0.23
CACNA1A-217ENST00000635786 TIAM1Q13009 1591 aa13.59□□□□□ -0.23
CACNA1A-217ENST00000635786 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
CACNA1A-217ENST00000635786 ABCA10Q8WWZ4 1543 aa13.58□□□□□ -0.24
CACNA1A-217ENST00000635786 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.24
CACNA1A-217ENST00000635786 C11orf95C9JLR9 678 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-217ENST00000635786 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-217ENST00000635786 PBXIP1Q96AQ6 731 aa13.58□□□□□ -0.24
CACNA1A-217ENST00000635786 VTI1AQ96AJ9 217 aa13.57□□□□□ -0.24
CACNA1A-217ENST00000635786 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-217ENST00000635786 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
CACNA1A-217ENST00000635786 FAM50AQ14320 339 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-217ENST00000635786 OXER1Q8TDS5 423 aa13.56□□□□□ -0.24
CACNA1A-217ENST00000635786 ZBED9Q6R2W3 1325 aa13.56□□□□□ -0.24
CACNA1A-217ENST00000635786 EXOC8Q8IYI6 725 aa13.56□□□□□ -0.24
CACNA1A-217ENST00000635786 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
CACNA1A-217ENST00000635786 IRF6O14896 467 aa13.55□□□□□ -0.24
CACNA1A-217ENST00000635786 FBXO31Q5XUX0 539 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-217ENST00000635786 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-217ENST00000635786 CSB-PGBD3P0DP91 1061 aa13.54□□□□□ -0.24
CACNA1A-217ENST00000635786 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
CACNA1A-217ENST00000635786 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
CACNA1A-217ENST00000635786 TBC1D12O60347 775 aa13.54□□□□□ -0.24
CACNA1A-217ENST00000635786 PEX14O75381 377 aa13.54□□□□□ -0.24
CACNA1A-217ENST00000635786 POLR3EQ9NVU0 708 aa13.54□□□□□ -0.24
CACNA1A-217ENST00000635786 GPATCH3Q96I76 525 aa13.53□□□□□ -0.24
CACNA1A-217ENST00000635786 TPD52L2O43399 206 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-217ENST00000635786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.53□□□□□ -0.24
CACNA1A-217ENST00000635786 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
CACNA1A-217ENST00000635786 LRRC9Q6ZRR7 1453 aa13.53□□□□□ -0.24
CACNA1A-217ENST00000635786 FOXD4L6Q3SYB3 417 aaPredicted RBP13.52□□□□□ -0.24
CACNA1A-217ENST00000635786 FOXD4L3Q6VB84 417 aaPredicted RBP13.52□□□□□ -0.24
CACNA1A-217ENST00000635786 KLHL42Q9P2K6 505 aa13.52□□□□□ -0.24
CACNA1A-217ENST00000635786 WASHC2CQ9Y4E1 1318 aa13.52□□□□□ -0.25
CACNA1A-217ENST00000635786 USTQ9Y2C2 406 aa13.52□□□□□ -0.25
CACNA1A-217ENST00000635786 DNAJC14Q6Y2X3 702 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-217ENST00000635786 GIPC2Q8TF65 315 aa13.51□□□□□ -0.25
CACNA1A-217ENST00000635786 ZNF326Q5BKZ1 582 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-217ENST00000635786 MYH16Q9H6N6 1097 aa13.51□□□□□ -0.25
CACNA1A-217ENST00000635786 NCOA2Q15596 1464 aa13.5□□□□□ -0.25
CACNA1A-217ENST00000635786 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-217ENST00000635786 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
CACNA1A-217ENST00000635786 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
CACNA1A-217ENST00000635786 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
CACNA1A-217ENST00000635786 NAALADL2Q58DX5 795 aa13.49□□□□□ -0.25
CACNA1A-217ENST00000635786 UBXN4Q92575 508 aa13.49□□□□□ -0.25
CACNA1A-217ENST00000635786 TARBP1Q13395 1621 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 ANAPC15P60006 121 aa13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 SGSM3Q96HU1 749 aa13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 SRPK2P78362 688 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 TSR1Q2NL82 804 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 DPH6Q7L8W6 267 aa13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 ADAMTS19Q8TE59 1207 aa13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 CDCA7Q9BWT1 371 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 CNTLNQ9NXG0 1405 aa13.48□□□□□ -0.25
CACNA1A-217ENST00000635786 TAGLNQ01995 201 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-217ENST00000635786 PLCD4Q9BRC7 762 aa13.47□□□□□ -0.25
CACNA1A-217ENST00000635786 BCL2L13Q9BXK5 485 aa13.47□□□□□ -0.25
CACNA1A-217ENST00000635786 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
CACNA1A-217ENST00000635786 VRTNQ9H8Y1 702 aa13.47□□□□□ -0.25
CACNA1A-217ENST00000635786 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-217ENST00000635786 GAPVD1Q14C86 1478 aa13.47□□□□□ -0.25
CACNA1A-217ENST00000635786 RNF123Q5XPI4 1314 aa13.46□□□□□ -0.25
CACNA1A-217ENST00000635786 ABL2P42684 1182 aa13.46□□□□□ -0.25
CACNA1A-217ENST00000635786 SH3D19Q5HYK7 790 aa13.46□□□□□ -0.25
CACNA1A-217ENST00000635786 CFAP43Q8NDM7 1665 aa13.46□□□□□ -0.25
CACNA1A-217ENST00000635786 WDR62O43379 1518 aa13.46□□□□□ -0.25
CACNA1A-217ENST00000635786 MAP4K4O95819 1239 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-217ENST00000635786 CNPY4Q8N129 248 aa13.46□□□□□ -0.25
CACNA1A-217ENST00000635786 FAM212AQ96EL1 285 aa13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 AQRO60306 1485 aaKnown RBP eCLIP13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 SPDYE5A6NIY4 337 aa13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 TMEM88BA6NKF7 163 aa13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
CACNA1A-217ENST00000635786 EVI5LQ96CN4 794 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms