RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 ARHGEF40Q8TER5 1519 aa11.99□□□□□ -0.49
CLN5-204ENST00000635761 OXER1Q8TDS5 423 aa11.98□□□□□ -0.49
CLN5-204ENST00000635761 EMILIN3Q9NT22 766 aa11.98□□□□□ -0.49
CLN5-204ENST00000635761 PLEKHD1A6NEE1 506 aa11.97□□□□□ -0.49
CLN5-204ENST00000635761 TBC1D12O60347 775 aa11.97□□□□□ -0.49
CLN5-204ENST00000635761 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLN5-204ENST00000635761 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.49
CLN5-204ENST00000635761 FANCAO15360 1455 aa11.96□□□□□ -0.49
CLN5-204ENST00000635761 AKNAQ7Z591 1439 aa11.96□□□□□ -0.49
CLN5-204ENST00000635761 SETD1BQ9UPS6 1966 aaKnown RBP11.96□□□□□ -0.49
CLN5-204ENST00000635761 RANGAP1P46060 587 aaPredicted RBP11.96□□□□□ -0.49
CLN5-204ENST00000635761 PCDHGA4Q9Y5G9 962 aa11.96□□□□□ -0.49
CLN5-204ENST00000635761 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
CLN5-204ENST00000635761 PCF11O94913 1555 aaKnown RBP11.95□□□□□ -0.5
CLN5-204ENST00000635761 DENND4BO75064 1496 aaPredicted RBP11.95□□□□□ -0.5
CLN5-204ENST00000635761 CDC42BPBQ9Y5S2 1711 aa11.94□□□□□ -0.5
CLN5-204ENST00000635761 HECW1Q76N89 1606 aa11.94□□□□□ -0.5
CLN5-204ENST00000635761 KCNV2Q8TDN2 545 aa11.94□□□□□ -0.5
CLN5-204ENST00000635761 LMTK3Q96Q04 1460 aa11.94□□□□□ -0.5
CLN5-204ENST00000635761 CDK13Q14004 1512 aaKnown RBP11.93□□□□□ -0.5
CLN5-204ENST00000635761 ST18O60284 1047 aa11.93□□□□□ -0.5
CLN5-204ENST00000635761 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
CLN5-204ENST00000635761 ARIH1Q9Y4X5 557 aaPredicted RBP11.93□□□□□ -0.5
CLN5-204ENST00000635761 ARID4BQ4LE39 1312 aaPredicted RBP11.92□□□□□ -0.5
CLN5-204ENST00000635761 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
CLN5-204ENST00000635761 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
CLN5-204ENST00000635761 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
CLN5-204ENST00000635761 ZFYVE16Q7Z3T8 1539 aa11.91□□□□□ -0.5
CLN5-204ENST00000635761 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
CLN5-204ENST00000635761 ARSIQ5FYB1 569 aa11.91□□□□□ -0.5
CLN5-204ENST00000635761 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
CLN5-204ENST00000635761 KIF14Q15058 1648 aa11.9□□□□□ -0.5
CLN5-204ENST00000635761 DPYSL4O14531 572 aa11.9□□□□□ -0.5
CLN5-204ENST00000635761 PLCH2O75038 1416 aa11.89□□□□□ -0.51
CLN5-204ENST00000635761 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
CLN5-204ENST00000635761 FBXO41Q8TF61 875 aa11.89□□□□□ -0.51
CLN5-204ENST00000635761 STRCQ7RTU9 1775 aa11.89□□□□□ -0.51
CLN5-204ENST00000635761 YEATS2Q9ULM3 1422 aa11.88□□□□□ -0.51
CLN5-204ENST00000635761 CDC42BPAQ5VT25 1732 aa11.88□□□□□ -0.51
CLN5-204ENST00000635761 POGZQ7Z3K3 1410 aa11.87□□□□□ -0.51
CLN5-204ENST00000635761 NUDT7P0C024 238 aa11.86□□□□□ -0.51
CLN5-204ENST00000635761 LCE2DQ5TA82 110 aaPredicted RBP11.86□□□□□ -0.51
CLN5-204ENST00000635761 KHSRPQ92945 711 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLN5-204ENST00000635761 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
CLN5-204ENST00000635761 ARHGAP35Q9NRY4 1499 aa11.85□□□□□ -0.51
CLN5-204ENST00000635761 SPDYE16A6NNV3 312 aaPredicted RBP11.85□□□□□ -0.51
CLN5-204ENST00000635761 EVI5O60447 810 aa11.85□□□□□ -0.51
CLN5-204ENST00000635761 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
CLN5-204ENST00000635761 C3P01024 1663 aa11.84□□□□□ -0.51
CLN5-204ENST00000635761 ATP10AO60312 1499 aa11.84□□□□□ -0.51
CLN5-204ENST00000635761 PDIA6Q15084 440 aa11.84□□□□□ -0.51
CLN5-204ENST00000635761 ARHGEF12Q9NZN5 1544 aa11.84□□□□□ -0.51
CLN5-204ENST00000635761 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
CLN5-204ENST00000635761 KDM5CP41229 1560 aa11.84□□□□□ -0.51
CLN5-204ENST00000635761 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
CLN5-204ENST00000635761 UBTFP17480 764 aaKnown RBP11.82□□□□□ -0.52
CLN5-204ENST00000635761 EMP3P54852 163 aa11.82□□□□□ -0.52
CLN5-204ENST00000635761 HSPA2P54652 639 aa11.81□□□□□ -0.52
CLN5-204ENST00000635761 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
CLN5-204ENST00000635761 MARVELD3Q96A59 401 aa11.81□□□□□ -0.52
CLN5-204ENST00000635761 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
CLN5-204ENST00000635761 KIDINS220Q9ULH0 1771 aa11.81□□□□□ -0.52
CLN5-204ENST00000635761 REREQ9P2R6 1566 aa11.8□□□□□ -0.52
CLN5-204ENST00000635761 ABCA6Q8N139 1617 aa11.8□□□□□ -0.52
CLN5-204ENST00000635761 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
CLN5-204ENST00000635761 CDK11AQ9UQ88 783 aaPredicted RBP11.8□□□□□ -0.52
CLN5-204ENST00000635761 ZNF518AQ6AHZ1 1483 aa11.8□□□□□ -0.52
CLN5-204ENST00000635761 ARHGAP5Q13017 1502 aa11.8□□□□□ -0.52
CLN5-204ENST00000635761 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
CLN5-204ENST00000635761 C9orf84Q5VXU9 1444 aa11.79□□□□□ -0.52
CLN5-204ENST00000635761 MLECQ14165 292 aa11.79□□□□□ -0.52
CLN5-204ENST00000635761 TROQ12816 1431 aaPredicted RBP11.78□□□□□ -0.52
CLN5-204ENST00000635761 SUPT6HQ7KZ85 1726 aaKnown RBP11.78□□□□□ -0.52
CLN5-204ENST00000635761 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
CLN5-204ENST00000635761 ERBB3P21860 1342 aa11.77□□□□□ -0.53
CLN5-204ENST00000635761 PSDA5PKW4 1024 aaPredicted RBP11.76□□□□□ -0.53
CLN5-204ENST00000635761 AFAP1Q8N556 730 aa11.76□□□□□ -0.53
CLN5-204ENST00000635761 MROH2AA6NES4 1674 aa11.75□□□□□ -0.53
CLN5-204ENST00000635761 CLIP1P30622 1438 aa11.75□□□□□ -0.53
CLN5-204ENST00000635761 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
CLN5-204ENST00000635761 ABCC1P33527 1531 aa11.75□□□□□ -0.53
CLN5-204ENST00000635761 PTGER2P43116 358 aa11.74□□□□□ -0.53
CLN5-204ENST00000635761 CEBPAP49715 358 aaPredicted RBP11.74□□□□□ -0.53
CLN5-204ENST00000635761 AGLP35573 1532 aa11.73□□□□□ -0.53
CLN5-204ENST00000635761 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
CLN5-204ENST00000635761 CCDC18Q5T9S5 1454 aa11.72□□□□□ -0.53
CLN5-204ENST00000635761 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
CLN5-204ENST00000635761 FAM205CA6NFA0 338 aa11.72□□□□□ -0.53
CLN5-204ENST00000635761 NBR1Q14596 966 aa11.72□□□□□ -0.53
CLN5-204ENST00000635761 SAMD9LQ8IVG5 1584 aa11.71□□□□□ -0.53
CLN5-204ENST00000635761 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
CLN5-204ENST00000635761 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.54
CLN5-204ENST00000635761 TRAPPC8Q9Y2L5 1435 aa11.7□□□□□ -0.54
CLN5-204ENST00000635761 SEMA3EO15041 775 aa11.7□□□□□ -0.54
CLN5-204ENST00000635761 FOSBP53539 338 aa11.7□□□□□ -0.54
CLN5-204ENST00000635761 ZNF454Q8N9F8 522 aa11.7□□□□□ -0.54
CLN5-204ENST00000635761 DDX12PQ92771 950 aa11.7□□□□□ -0.54
CLN5-204ENST00000635761 ADGBQ8N7X0 1667 aa11.69□□□□□ -0.54
CLN5-204ENST00000635761 PHF14O94880 888 aa11.69□□□□□ -0.54
CLN5-204ENST00000635761 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms