RNA–Protein interactions for RNA: ENST00000635397.1

SMARCA2-241, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-241ENST00000635397 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMARCA2-241ENST00000635397 RDH13Q8NBN7 331 aa10.52□□□□□ -0.73
SMARCA2-241ENST00000635397 ARXQ96QS3 562 aa10.52□□□□□ -0.73
SMARCA2-241ENST00000635397 RIC3Q7Z5B4 369 aa10.51□□□□□ -0.73
SMARCA2-241ENST00000635397 LIMD1Q9UGP4 676 aa10.51□□□□□ -0.73
SMARCA2-241ENST00000635397 RABGEF1Q9UJ41 708 aa10.5□□□□□ -0.73
SMARCA2-241ENST00000635397 ST18O60284 1047 aa10.49□□□□□ -0.73
SMARCA2-241ENST00000635397 EMP3P54852 163 aa10.49□□□□□ -0.73
SMARCA2-241ENST00000635397 MCM6Q14566 821 aa10.49□□□□□ -0.73
SMARCA2-241ENST00000635397 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
SMARCA2-241ENST00000635397 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
SMARCA2-241ENST00000635397 UBTFP17480 764 aaKnown RBP10.48□□□□□ -0.73
SMARCA2-241ENST00000635397 RSPH4AQ5TD94 716 aa10.48□□□□□ -0.73
SMARCA2-241ENST00000635397 DMRTA1Q5VZB9 504 aa10.48□□□□□ -0.73
SMARCA2-241ENST00000635397 SLC4A5Q9BY07 1137 aa10.48□□□□□ -0.73
SMARCA2-241ENST00000635397 SEPT9Q9UHD8 586 aaPredicted RBP10.48□□□□□ -0.73
SMARCA2-241ENST00000635397 MOXD2PA6NHM9 499 aa10.47□□□□□ -0.73
SMARCA2-241ENST00000635397 SPTLC1O15269 473 aa10.47□□□□□ -0.73
SMARCA2-241ENST00000635397 PBX2P40425 430 aa10.46□□□□□ -0.73
SMARCA2-241ENST00000635397 RFC5P40937 340 aa10.46□□□□□ -0.73
SMARCA2-241ENST00000635397 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.73
SMARCA2-241ENST00000635397 SWT1Q5T5J6 900 aaKnown RBP10.46□□□□□ -0.73
SMARCA2-241ENST00000635397 RSBN1LQ6PCB5 846 aaPredicted RBP10.46□□□□□ -0.73
SMARCA2-241ENST00000635397 MARVELD3Q96A59 401 aa10.46□□□□□ -0.73
SMARCA2-241ENST00000635397 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
SMARCA2-241ENST00000635397 KDM4AO75164 1064 aa10.45□□□□□ -0.74
SMARCA2-241ENST00000635397 NDUFV2P19404 249 aa10.45□□□□□ -0.74
SMARCA2-241ENST00000635397 CSPP1Q1MSJ5 1256 aa10.45□□□□□ -0.74
SMARCA2-241ENST00000635397 TUSC1Q2TAM9 212 aa10.45□□□□□ -0.74
SMARCA2-241ENST00000635397 CLUAP1Q96AJ1 413 aa10.45□□□□□ -0.74
SMARCA2-241ENST00000635397 PPP2R2DQ66LE6 453 aa10.44□□□□□ -0.74
SMARCA2-241ENST00000635397 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
SMARCA2-241ENST00000635397 A6NJR5 290 aa10.43□□□□□ -0.74
SMARCA2-241ENST00000635397 GCGRP47871 477 aa10.43□□□□□ -0.74
SMARCA2-241ENST00000635397 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
SMARCA2-241ENST00000635397 TMEM259Q4ZIN3 620 aa10.43□□□□□ -0.74
SMARCA2-241ENST00000635397 FBXO31Q5XUX0 539 aaPredicted RBP10.43□□□□□ -0.74
SMARCA2-241ENST00000635397 VPS9D1Q9Y2B5 631 aa10.43□□□□□ -0.74
SMARCA2-241ENST00000635397 SLC10A3P09131 477 aa10.42□□□□□ -0.74
SMARCA2-241ENST00000635397 GJA5P36382 358 aa10.42□□□□□ -0.74
SMARCA2-241ENST00000635397 SLC4A3P48751 1232 aa10.42□□□□□ -0.74
SMARCA2-241ENST00000635397 USP46P62068 366 aa10.42□□□□□ -0.74
SMARCA2-241ENST00000635397 HOMEZQ8IX15 550 aa10.42□□□□□ -0.74
SMARCA2-241ENST00000635397 BANK1Q8NDB2 785 aa10.42□□□□□ -0.74
SMARCA2-241ENST00000635397 SPDYE5A6NIY4 337 aa10.41□□□□□ -0.74
SMARCA2-241ENST00000635397 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
SMARCA2-241ENST00000635397 RAD21O60216 631 aa10.39□□□□□ -0.75
SMARCA2-241ENST00000635397 QPCTQ16769 361 aa10.39□□□□□ -0.75
SMARCA2-241ENST00000635397 SLF2Q8IX21 1173 aa10.39□□□□□ -0.75
SMARCA2-241ENST00000635397 FAM163AQ96GL9 167 aaPredicted RBP10.39□□□□□ -0.75
SMARCA2-241ENST00000635397 NBPF3Q9H094 633 aa10.39□□□□□ -0.75
SMARCA2-241ENST00000635397 SNRKQ9NRH2 765 aa10.39□□□□□ -0.75
SMARCA2-241ENST00000635397 ARID3CA6NKF2 412 aa10.38□□□□□ -0.75
SMARCA2-241ENST00000635397 NUTM2BA6NNL0 878 aaPredicted RBP10.38□□□□□ -0.75
SMARCA2-241ENST00000635397 NUTM2EB1AL46 878 aaPredicted RBP10.38□□□□□ -0.75
SMARCA2-241ENST00000635397 HOXA2O43364 376 aa10.38□□□□□ -0.75
SMARCA2-241ENST00000635397 LILRB3O75022 631 aa10.38□□□□□ -0.75
SMARCA2-241ENST00000635397 NUTM2DQ5VT03 806 aaPredicted RBP10.38□□□□□ -0.75
SMARCA2-241ENST00000635397 SAMD7Q7Z3H4 446 aa10.38□□□□□ -0.75
SMARCA2-241ENST00000635397 LAPTM4BQ86VI4 370 aa10.38□□□□□ -0.75
SMARCA2-241ENST00000635397 NUTM2AQ8IVF1 878 aaPredicted RBP10.38□□□□□ -0.75
SMARCA2-241ENST00000635397 TRAK2O60296 914 aa10.37□□□□□ -0.75
SMARCA2-241ENST00000635397 FDX1P10109 184 aa10.37□□□□□ -0.75
SMARCA2-241ENST00000635397 HS3ST6Q96QI5 342 aa10.37□□□□□ -0.75
SMARCA2-241ENST00000635397 APBB1O00213 710 aa10.36□□□□□ -0.75
SMARCA2-241ENST00000635397 RTL5Q5HYW3 569 aaPredicted RBP10.36□□□□□ -0.75
SMARCA2-241ENST00000635397 CABLES1Q8TDN4 633 aa10.36□□□□□ -0.75
SMARCA2-241ENST00000635397 POM121Q96HA1 1249 aa10.36□□□□□ -0.75
SMARCA2-241ENST00000635397 TK2O00142 265 aa10.35□□□□□ -0.75
SMARCA2-241ENST00000635397 RNF40O75150 1001 aa10.35□□□□□ -0.75
SMARCA2-241ENST00000635397 PRPF38BQ5VTL8 546 aaKnown RBP10.35□□□□□ -0.75
SMARCA2-241ENST00000635397 PROSER2Q86WR7 435 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-241ENST00000635397 ARID3AQ99856 593 aa10.35□□□□□ -0.75
SMARCA2-241ENST00000635397 ZBTB3Q9H5J0 574 aa10.35□□□□□ -0.75
SMARCA2-241ENST00000635397 C1orf115Q9H7X2 142 aa10.35□□□□□ -0.75
SMARCA2-241ENST00000635397 BHMG1C9JSJ3 638 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-241ENST00000635397 AP1G2O75843 785 aa10.34□□□□□ -0.75
SMARCA2-241ENST00000635397 GUCA2AQ02747 115 aa10.34□□□□□ -0.75
SMARCA2-241ENST00000635397 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
SMARCA2-241ENST00000635397 CFHP08603 1231 aa10.33□□□□□ -0.76
SMARCA2-241ENST00000635397 HRCP23327 699 aa10.33□□□□□ -0.76
SMARCA2-241ENST00000635397 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
SMARCA2-241ENST00000635397 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
SMARCA2-241ENST00000635397 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-241ENST00000635397 HLA-CQ95604 372 aa10.33□□□□□ -0.76
SMARCA2-241ENST00000635397 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-241ENST00000635397 COG6Q9Y2V7 657 aa10.33□□□□□ -0.76
SMARCA2-241ENST00000635397 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
SMARCA2-241ENST00000635397 FUT2Q10981 343 aa10.31□□□□□ -0.76
SMARCA2-241ENST00000635397 KMT5BQ4FZB7 885 aa10.3□□□□□ -0.76
SMARCA2-241ENST00000635397 ADGRD1Q6QNK2 874 aa10.3□□□□□ -0.76
SMARCA2-241ENST00000635397 MTMR14Q8NCE2 650 aa10.3□□□□□ -0.76
SMARCA2-241ENST00000635397 LSM11P83369 360 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMARCA2-241ENST00000635397 MTMR2Q13614 643 aa10.29□□□□□ -0.76
SMARCA2-241ENST00000635397 USP17L8P0C7I0 530 aa10.28□□□□□ -0.76
SMARCA2-241ENST00000635397 ATP6V1AP38606 617 aa10.28□□□□□ -0.76
SMARCA2-241ENST00000635397 FNBP4Q8N3X1 1017 aaPredicted RBP10.28□□□□□ -0.76
SMARCA2-241ENST00000635397 LRCH3Q96II8 777 aa10.28□□□□□ -0.76
SMARCA2-241ENST00000635397 PRM3Q9NNZ6 103 aa10.28□□□□□ -0.76
SMARCA2-241ENST00000635397 ZNF777Q9ULD5 760 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms