RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PRR20BP86481 221 aa7.33□□□□□ -1.24
SMARCB1-208ENST00000634926 PRR20AP86496 221 aa7.33□□□□□ -1.24
SMARCB1-208ENST00000634926 PLA2G2CQ5R387 149 aa7.33□□□□□ -1.24
SMARCB1-208ENST00000634926 ZNF598Q86UK7 904 aaKnown RBP7.33□□□□□ -1.24
SMARCB1-208ENST00000634926 RBM27Q9P2N5 1060 aaKnown RBP7.33□□□□□ -1.24
SMARCB1-208ENST00000634926 S1PR4O95977 384 aa7.32□□□□□ -1.24
SMARCB1-208ENST00000634926 HDGFP51858 240 aaKnown RBP7.32□□□□□ -1.24
SMARCB1-208ENST00000634926 TREML4Q6UXN2 200 aa7.32□□□□□ -1.24
SMARCB1-208ENST00000634926 DACH1Q9UI36 760 aa7.32□□□□□ -1.24
SMARCB1-208ENST00000634926 PCDHB3Q9Y5E6 796 aa7.32□□□□□ -1.24
SMARCB1-208ENST00000634926 FAM187AA6NFU0 413 aa7.31□□□□□ -1.24
SMARCB1-208ENST00000634926 SLF2Q8IX21 1173 aa7.31□□□□□ -1.24
SMARCB1-208ENST00000634926 AAASQ9NRG9 546 aa7.31□□□□□ -1.24
SMARCB1-208ENST00000634926 ZNF697Q5TEC3 545 aa7.3□□□□□ -1.24
SMARCB1-208ENST00000634926 ARIH1Q9Y4X5 557 aaPredicted RBP7.3□□□□□ -1.24
SMARCB1-208ENST00000634926 ANKLE1Q8NAG6 615 aa7.29□□□□□ -1.24
SMARCB1-208ENST00000634926 E2F4Q16254 413 aa7.28□□□□□ -1.24
SMARCB1-208ENST00000634926 PKD2L1Q9P0L9 805 aa7.27□□□□□ -1.25
SMARCB1-208ENST00000634926 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
SMARCB1-208ENST00000634926 FAM161AQ3B820 660 aa7.24□□□□□ -1.25
SMARCB1-208ENST00000634926 ACTN4O43707 911 aaKnown RBP7.23□□□□□ -1.25
SMARCB1-208ENST00000634926 SLC10A3P09131 477 aa7.23□□□□□ -1.25
SMARCB1-208ENST00000634926 NECTIN2Q92692 538 aa7.23□□□□□ -1.25
SMARCB1-208ENST00000634926 GMPR2Q9P2T1 348 aaKnown RBP7.22□□□□□ -1.25
SMARCB1-208ENST00000634926 TMEM134Q9H6X4 195 aa7.21□□□□□ -1.26
SMARCB1-208ENST00000634926 ADH1BP00325 375 aa7.2□□□□□ -1.26
SMARCB1-208ENST00000634926 CFHP08603 1231 aa7.2□□□□□ -1.26
SMARCB1-208ENST00000634926 MLLT3P42568 568 aaPredicted RBP7.2□□□□□ -1.26
SMARCB1-208ENST00000634926 FOXC1Q12948 553 aa7.2□□□□□ -1.26
SMARCB1-208ENST00000634926 NFX1Q12986 1120 aaKnown RBP7.2□□□□□ -1.26
SMARCB1-208ENST00000634926 DNAJB2P25686 324 aa7.19□□□□□ -1.26
SMARCB1-208ENST00000634926 PRR14Q9BWN1 585 aa7.19□□□□□ -1.26
SMARCB1-208ENST00000634926 ADGRG1Q9Y653 693 aa7.19□□□□□ -1.26
SMARCB1-208ENST00000634926 RCCD1A6NED2 376 aa7.18□□□□□ -1.26
SMARCB1-208ENST00000634926 WFS1O76024 890 aa7.18□□□□□ -1.26
SMARCB1-208ENST00000634926 CRIPAKQ8N1N5 446 aa7.18□□□□□ -1.26
SMARCB1-208ENST00000634926 TOR4AQ9NXH8 423 aa7.18□□□□□ -1.26
SMARCB1-208ENST00000634926 PUS10Q3MIT2 529 aaKnown RBP7.17□□□□□ -1.26
SMARCB1-208ENST00000634926 SCUBE3Q8IX30 993 aa7.17□□□□□ -1.26
SMARCB1-208ENST00000634926 BBXQ8WY36 941 aaPredicted RBP7.17□□□□□ -1.26
SMARCB1-208ENST00000634926 SLC6A16Q9GZN6 736 aa7.17□□□□□ -1.26
SMARCB1-208ENST00000634926 AVPP01185 164 aa7.16□□□□□ -1.26
SMARCB1-208ENST00000634926 PTGDRQ13258 359 aa7.16□□□□□ -1.26
SMARCB1-208ENST00000634926 C11orf95C9JLR9 678 aaPredicted RBP7.14□□□□□ -1.27
SMARCB1-208ENST00000634926 SLC4A3P48751 1232 aa7.14□□□□□ -1.27
SMARCB1-208ENST00000634926 KMT5BQ4FZB7 885 aa7.14□□□□□ -1.27
SMARCB1-208ENST00000634926 WIPF1O43516 503 aa7.13□□□□□ -1.27
SMARCB1-208ENST00000634926 AXIN1O15169 862 aa7.12□□□□□ -1.27
SMARCB1-208ENST00000634926 NR1I2O75469 434 aa7.12□□□□□ -1.27
SMARCB1-208ENST00000634926 SNRPBP14678 240 aaKnown RBP7.12□□□□□ -1.27
SMARCB1-208ENST00000634926 RBM46Q8TBY0 533 aaKnown RBP7.12□□□□□ -1.27
SMARCB1-208ENST00000634926 SPRYD3Q8NCJ5 442 aa7.11□□□□□ -1.27
SMARCB1-208ENST00000634926 SPSB2Q99619 263 aa7.11□□□□□ -1.27
SMARCB1-208ENST00000634926 STK17AQ9UEE5 414 aa7.11□□□□□ -1.27
SMARCB1-208ENST00000634926 FAM160A2Q8N612 972 aaPredicted RBP7.1□□□□□ -1.27
SMARCB1-208ENST00000634926 WDR70Q9NW82 654 aa7.1□□□□□ -1.27
SMARCB1-208ENST00000634926 FCF1Q9Y324 198 aaKnown RBP7.1□□□□□ -1.27
SMARCB1-208ENST00000634926 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
SMARCB1-208ENST00000634926 LMOD2Q6P5Q4 547 aa7.09□□□□□ -1.27
SMARCB1-208ENST00000634926 THAP11Q96EK4 314 aa7.09□□□□□ -1.27
SMARCB1-208ENST00000634926 RPIAP49247 311 aa7.08□□□□□ -1.28
SMARCB1-208ENST00000634926 CYP4X1Q8N118 509 aa7.08□□□□□ -1.28
SMARCB1-208ENST00000634926 PRDM9Q9NQV7 894 aa7.08□□□□□ -1.28
SMARCB1-208ENST00000634926 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
SMARCB1-208ENST00000634926 SMPD1P17405 629 aa7.07□□□□□ -1.28
SMARCB1-208ENST00000634926 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
SMARCB1-208ENST00000634926 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
SMARCB1-208ENST00000634926 MORN1Q5T089 497 aa7.06□□□□□ -1.28
SMARCB1-208ENST00000634926 PXYLP1Q8TE99 480 aa7.06□□□□□ -1.28
SMARCB1-208ENST00000634926 CTC1Q2NKJ3 1217 aa7.05□□□□□ -1.28
SMARCB1-208ENST00000634926 ATP13A2Q9NQ11 1180 aa7.05□□□□□ -1.28
SMARCB1-208ENST00000634926 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.04□□□□□ -1.28
SMARCB1-208ENST00000634926 TERTO14746 1132 aaKnown RBP7.04□□□□□ -1.28
SMARCB1-208ENST00000634926 INSM1Q01101 510 aaPredicted RBP7.04□□□□□ -1.28
SMARCB1-208ENST00000634926 NUTM2FA1L443 756 aa7.03□□□□□ -1.28
SMARCB1-208ENST00000634926 J3QL48 77 aa7.03□□□□□ -1.28
SMARCB1-208ENST00000634926 CD2BP2O95400 341 aaKnown RBP7.03□□□□□ -1.28
SMARCB1-208ENST00000634926 FUT2Q10981 343 aa7.03□□□□□ -1.28
SMARCB1-208ENST00000634926 PAXIP1Q6ZW49 1069 aaPredicted RBP7.03□□□□□ -1.28
SMARCB1-208ENST00000634926 NLRP7Q8WX94 980 aa7.03□□□□□ -1.28
SMARCB1-208ENST00000634926 CFAP44Q96MT7 982 aa7.03□□□□□ -1.28
SMARCB1-208ENST00000634926 SLC27A5Q9Y2P5 690 aa7.03□□□□□ -1.28
SMARCB1-208ENST00000634926 TTC24A2A3L6 582 aaPredicted RBP7.01□□□□□ -1.29
SMARCB1-208ENST00000634926 KCNV2Q8TDN2 545 aa7.01□□□□□ -1.29
SMARCB1-208ENST00000634926 TRIM47Q96LD4 638 aa7.01□□□□□ -1.29
SMARCB1-208ENST00000634926 FECHP22830 423 aa7□□□□□ -1.29
SMARCB1-208ENST00000634926 RNF19BQ6ZMZ0 732 aa7□□□□□ -1.29
SMARCB1-208ENST00000634926 METTL3Q86U44 580 aaKnown RBP7□□□□□ -1.29
SMARCB1-208ENST00000634926 HPS1Q92902 700 aa7□□□□□ -1.29
SMARCB1-208ENST00000634926 WNT7AO00755 349 aa6.99□□□□□ -1.29
SMARCB1-208ENST00000634926 BRICD5Q6PL45 260 aa6.99□□□□□ -1.29
SMARCB1-208ENST00000634926 ARHGEF1Q92888 912 aaKnown RBP6.99□□□□□ -1.29
SMARCB1-208ENST00000634926 MRGPRX2Q96LB1 330 aa6.99□□□□□ -1.29
SMARCB1-208ENST00000634926 SNIP1Q8TAD8 396 aaKnown RBP6.98□□□□□ -1.29
SMARCB1-208ENST00000634926 FCHSD2O94868 740 aa6.96□□□□□ -1.3
SMARCB1-208ENST00000634926 FMNL1O95466 1100 aaPredicted RBP6.96□□□□□ -1.3
SMARCB1-208ENST00000634926 GMPRP36959 345 aa6.96□□□□□ -1.3
SMARCB1-208ENST00000634926 ATP6V1AP38606 617 aa6.96□□□□□ -1.3
SMARCB1-208ENST00000634926 PHOX2BQ99453 314 aa6.96□□□□□ -1.3
SMARCB1-208ENST00000634926 OATP04181 439 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms