RNA–Protein interactions for RNA: ENST00000630240.1

CHRNA4-213, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 1,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-213ENST00000630240 NEURL4Q96JN8 1562 aa21.65■■□□□ 1.06
CHRNA4-213ENST00000630240 ARHGAP23Q9P227 1491 aa21.64■■□□□ 1.05
CHRNA4-213ENST00000630240 TMEM2Q9UHN6 1383 aa21.63■■□□□ 1.05
CHRNA4-213ENST00000630240 HDGFP51858 240 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-213ENST00000630240 EID1Q9Y6B2 187 aa21.61■■□□□ 1.05
CHRNA4-213ENST00000630240 ANKLE2Q86XL3 938 aa21.6■■□□□ 1.05
CHRNA4-213ENST00000630240 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
CHRNA4-213ENST00000630240 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
CHRNA4-213ENST00000630240 SCAF11Q99590 1463 aaKnown RBP21.58■■□□□ 1.05
CHRNA4-213ENST00000630240 RIMS2Q9UQ26 1411 aa21.58■■□□□ 1.05
CHRNA4-213ENST00000630240 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.58■■□□□ 1.04
CHRNA4-213ENST00000630240 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
CHRNA4-213ENST00000630240 CERKQ8TCT0 537 aa21.57■■□□□ 1.04
CHRNA4-213ENST00000630240 ZFYVE9O95405 1425 aa21.57■■□□□ 1.04
CHRNA4-213ENST00000630240 RPGRIP1LQ68CZ1 1315 aa21.56■■□□□ 1.04
CHRNA4-213ENST00000630240 DMRT2Q9Y5R5 561 aa21.55■■□□□ 1.04
CHRNA4-213ENST00000630240 NEXMIFQ5QGS0 1516 aa21.55■■□□□ 1.04
CHRNA4-213ENST00000630240 PPLO60437 1756 aa21.55■■□□□ 1.04
CHRNA4-213ENST00000630240 TXNDC2Q86VQ3 553 aa21.55■■□□□ 1.04
CHRNA4-213ENST00000630240 MED14O60244 1454 aa21.54■■□□□ 1.04
CHRNA4-213ENST00000630240 IQGAP1P46940 1657 aa21.53■■□□□ 1.04
CHRNA4-213ENST00000630240 IFT172Q9UG01 1749 aa21.53■■□□□ 1.04
CHRNA4-213ENST00000630240 NCKAP5LQ9HCH0 1330 aa21.53■■□□□ 1.04
CHRNA4-213ENST00000630240 NPHP4O75161 1426 aaPredicted RBP21.51■■□□□ 1.03
CHRNA4-213ENST00000630240 LTKP29376 864 aa21.5■■□□□ 1.03
CHRNA4-213ENST00000630240 RGL3Q3MIN7 710 aa21.5■■□□□ 1.03
CHRNA4-213ENST00000630240 PLEKHG1Q9ULL1 1385 aa21.48■■□□□ 1.03
CHRNA4-213ENST00000630240 VGFO15240 615 aaPredicted RBP21.48■■□□□ 1.03
CHRNA4-213ENST00000630240 MYOM2P54296 1465 aa21.45■■□□□ 1.02
CHRNA4-213ENST00000630240 STAC3Q96MF2 364 aa21.45■■□□□ 1.02
CHRNA4-213ENST00000630240 DIP2AQ14689 1571 aa21.44■■□□□ 1.02
CHRNA4-213ENST00000630240 BCANQ96GW7 911 aa21.44■■□□□ 1.02
CHRNA4-213ENST00000630240 SETBP1Q9Y6X0 1596 aa21.43■■□□□ 1.02
CHRNA4-213ENST00000630240 NUTM2DQ5VT03 806 aaPredicted RBP21.43■■□□□ 1.02
CHRNA4-213ENST00000630240 MIER1Q8N108 512 aa21.4■■□□□ 1.02
CHRNA4-213ENST00000630240 DCAF11Q8TEB1 546 aa21.39■■□□□ 1.01
CHRNA4-213ENST00000630240 L3MBTL2Q969R5 705 aa21.39■■□□□ 1.01
CHRNA4-213ENST00000630240 NRXN3Q9Y4C0 1643 aa21.39■■□□□ 1.01
CHRNA4-213ENST00000630240 NRXN1Q9ULB1 1477 aa21.38■■□□□ 1.01
CHRNA4-213ENST00000630240 LAMC1P11047 1609 aa21.37■■□□□ 1.01
CHRNA4-213ENST00000630240 ILDR2Q71H61 639 aa21.37■■□□□ 1.01
CHRNA4-213ENST00000630240 PIK3C2GO75747 1445 aa21.36■■□□□ 1.01
CHRNA4-213ENST00000630240 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
CHRNA4-213ENST00000630240 ADGRF5Q8IZF2 1346 aa21.35■■□□□ 1.01
CHRNA4-213ENST00000630240 CENPBP07199 599 aaPredicted RBP21.35■■□□□ 1.01
CHRNA4-213ENST00000630240 TBX22Q9Y458 520 aa21.35■■□□□ 1.01
CHRNA4-213ENST00000630240 KDM2AQ9Y2K7 1162 aa21.34■■□□□ 1.01
CHRNA4-213ENST00000630240 PIK3R4Q99570 1358 aa21.33■■□□□ 1.01
CHRNA4-213ENST00000630240 ALKQ9UM73 1620 aa21.33■■□□□ 1.01
CHRNA4-213ENST00000630240 SLC26A8Q96RN1 970 aa21.33■■□□□ 1
CHRNA4-213ENST00000630240 SETD1AO15047 1707 aaKnown RBP21.32■■□□□ 1
CHRNA4-213ENST00000630240 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
CHRNA4-213ENST00000630240 CHD2O14647 1828 aaKnown RBP21.3■■□□□ 1
CHRNA4-213ENST00000630240 DISP3Q9P2K9 1392 aa21.3■■□□□ 1
CHRNA4-213ENST00000630240 KIAA1210Q9ULL0 1709 aa21.29■■□□□ 1
CHRNA4-213ENST00000630240 EIF4G2P78344 907 aaKnown RBP eCLIP21.29■■□□□ 1
CHRNA4-213ENST00000630240 NWD1Q149M9 1564 aa21.28■■□□□ 1
CHRNA4-213ENST00000630240 PRAG1Q86YV5 1406 aa21.28■■□□□ 1
CHRNA4-213ENST00000630240 CPS1P31327 1500 aa21.27■■□□□ 1
CHRNA4-213ENST00000630240 C14orf93Q9H972 538 aaKnown RBP21.26■□□□□ 0.99
CHRNA4-213ENST00000630240 NKTRP30414 1462 aaKnown RBP21.25■□□□□ 0.99
CHRNA4-213ENST00000630240 ZNF335Q9H4Z2 1342 aaPredicted RBP21.25■□□□□ 0.99
CHRNA4-213ENST00000630240 KCNA6P17658 529 aa21.24■□□□□ 0.99
CHRNA4-213ENST00000630240 STRCP1A6NGW2 1772 aa21.23■□□□□ 0.99
CHRNA4-213ENST00000630240 METP08581 1390 aa21.23■□□□□ 0.99
CHRNA4-213ENST00000630240 XRN1Q8IZH2 1706 aaKnown RBP21.23■□□□□ 0.99
CHRNA4-213ENST00000630240 SOCS7O14512 581 aa21.22■□□□□ 0.99
CHRNA4-213ENST00000630240 LTBP4Q8N2S1 1624 aa21.22■□□□□ 0.99
CHRNA4-213ENST00000630240 HSPA5P11021 654 aaKnown RBP21.22■□□□□ 0.99
CHRNA4-213ENST00000630240 CFAP70Q5T0N1 1121 aa21.22■□□□□ 0.99
CHRNA4-213ENST00000630240 DDX10Q13206 875 aaKnown RBP21.21■□□□□ 0.99
CHRNA4-213ENST00000630240 NBPF8Q3BBV2 869 aa21.21■□□□□ 0.99
CHRNA4-213ENST00000630240 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
CHRNA4-213ENST00000630240 TRPM1Q7Z4N2 1603 aa21.21■□□□□ 0.99
CHRNA4-213ENST00000630240 RALGAPBQ86X10 1494 aa21.21■□□□□ 0.99
CHRNA4-213ENST00000630240 ASXL1Q8IXJ9 1541 aa21.2■□□□□ 0.98
CHRNA4-213ENST00000630240 HIRIP3Q9BW71 556 aaPredicted RBP21.18■□□□□ 0.98
CHRNA4-213ENST00000630240 AMOTL2Q9Y2J4 779 aa21.18■□□□□ 0.98
CHRNA4-213ENST00000630240 PTPRUQ92729 1446 aa21.18■□□□□ 0.98
CHRNA4-213ENST00000630240 ADGRB1O14514 1584 aa21.18■□□□□ 0.98
CHRNA4-213ENST00000630240 LRPPRCP42704 1394 aaKnown RBP21.17■□□□□ 0.98
CHRNA4-213ENST00000630240 PTCH1Q13635 1447 aa21.17■□□□□ 0.98
CHRNA4-213ENST00000630240 YTHDC2Q9H6S0 1430 aaKnown RBP21.17■□□□□ 0.98
CHRNA4-213ENST00000630240 TECPR2O15040 1411 aa21.15■□□□□ 0.98
CHRNA4-213ENST00000630240 IQSEC2Q5JU85 1478 aa21.14■□□□□ 0.97
CHRNA4-213ENST00000630240 TMEM132EQ6IEE7 984 aa21.14■□□□□ 0.97
CHRNA4-213ENST00000630240 LRRC7Q96NW7 1537 aa21.14■□□□□ 0.97
CHRNA4-213ENST00000630240 ABCC11Q96J66 1382 aa21.14■□□□□ 0.97
CHRNA4-213ENST00000630240 ROCK2O75116 1388 aaKnown RBP21.13■□□□□ 0.97
CHRNA4-213ENST00000630240 DLC1Q96QB1 1528 aa21.12■□□□□ 0.97
CHRNA4-213ENST00000630240 PROSER2Q86WR7 435 aaPredicted RBP21.12■□□□□ 0.97
CHRNA4-213ENST00000630240 NCOA3Q9Y6Q9 1424 aa21.12■□□□□ 0.97
CHRNA4-213ENST00000630240 ANP32CO43423 234 aa21.11■□□□□ 0.97
CHRNA4-213ENST00000630240 STK26Q9P289 416 aa21.11■□□□□ 0.97
CHRNA4-213ENST00000630240 XIRP1Q702N8 1843 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-213ENST00000630240 FAM135BQ49AJ0 1406 aa21.09■□□□□ 0.97
CHRNA4-213ENST00000630240 TMEM94Q12767 1356 aa21.08■□□□□ 0.97
CHRNA4-213ENST00000630240 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.97
CHRNA4-213ENST00000630240 SIRT1Q96EB6 747 aa21.08■□□□□ 0.97
CHRNA4-213ENST00000630240 YTHDC1Q96MU7 727 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms