RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-269ENST00000630224 ARHGAP5Q13017 1502 aa9.69□□□□□ -0.86
TCF4-269ENST00000630224 ABCA6Q8N139 1617 aa9.69□□□□□ -0.86
TCF4-269ENST00000630224 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
TCF4-269ENST00000630224 ZNF518AQ6AHZ1 1483 aa9.67□□□□□ -0.86
TCF4-269ENST00000630224 ZNF335Q9H4Z2 1342 aaPredicted RBP9.67□□□□□ -0.86
TCF4-269ENST00000630224 NCKAP5LQ9HCH0 1330 aa9.67□□□□□ -0.86
TCF4-269ENST00000630224 RYDENQ9NUL5 291 aaKnown RBP9.67□□□□□ -0.86
TCF4-269ENST00000630224 SUPT6HQ7KZ85 1726 aaKnown RBP9.67□□□□□ -0.86
TCF4-269ENST00000630224 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
TCF4-269ENST00000630224 KDM5CP41229 1560 aa9.66□□□□□ -0.86
TCF4-269ENST00000630224 NCOA1Q15788 1441 aa9.65□□□□□ -0.86
TCF4-269ENST00000630224 LRRIQ1Q96JM4 1722 aa9.65□□□□□ -0.86
TCF4-269ENST00000630224 CDC42BPBQ9Y5S2 1711 aa9.65□□□□□ -0.86
TCF4-269ENST00000630224 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.87
TCF4-269ENST00000630224 FBXO22Q8NEZ5 403 aa9.64□□□□□ -0.87
TCF4-269ENST00000630224 MS4A4AQ96JQ5 239 aa9.64□□□□□ -0.87
TCF4-269ENST00000630224 IQSEC2Q5JU85 1478 aa9.64□□□□□ -0.87
TCF4-269ENST00000630224 MICALL2Q8IY33 904 aa9.63□□□□□ -0.87
TCF4-269ENST00000630224 ITSN2Q9NZM3 1697 aa9.62□□□□□ -0.87
TCF4-269ENST00000630224 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
TCF4-269ENST00000630224 KIDINS220Q9ULH0 1771 aa9.62□□□□□ -0.87
TCF4-269ENST00000630224 REREQ9P2R6 1566 aa9.62□□□□□ -0.87
TCF4-269ENST00000630224 CLTCQ00610 1675 aaKnown RBP9.61□□□□□ -0.87
TCF4-269ENST00000630224 HSPA1LP34931 641 aa9.61□□□□□ -0.87
TCF4-269ENST00000630224 CDK11AQ9UQ88 783 aaPredicted RBP9.61□□□□□ -0.87
TCF4-269ENST00000630224 MLH3Q9UHC1 1453 aa9.6□□□□□ -0.87
TCF4-269ENST00000630224 MED1Q15648 1581 aaPredicted RBP9.6□□□□□ -0.87
TCF4-269ENST00000630224 TROQ12816 1431 aaPredicted RBP9.6□□□□□ -0.87
TCF4-269ENST00000630224 AGLP35573 1532 aa9.6□□□□□ -0.87
TCF4-269ENST00000630224 PREX2Q70Z35 1606 aa9.6□□□□□ -0.87
TCF4-269ENST00000630224 MYO3AQ8NEV4 1616 aa9.6□□□□□ -0.87
TCF4-269ENST00000630224 ARHGAP35Q9NRY4 1499 aa9.59□□□□□ -0.87
TCF4-269ENST00000630224 MROH2AA6NES4 1674 aa9.59□□□□□ -0.87
TCF4-269ENST00000630224 ZNF777Q9ULD5 760 aaPredicted RBP9.59□□□□□ -0.87
TCF4-269ENST00000630224 ABCC1P33527 1531 aa9.59□□□□□ -0.87
TCF4-269ENST00000630224 SNPHO15079 494 aa9.58□□□□□ -0.88
TCF4-269ENST00000630224 CDC42BPAQ5VT25 1732 aa9.58□□□□□ -0.88
TCF4-269ENST00000630224 ZMYM3Q14202 1370 aa9.58□□□□□ -0.88
TCF4-269ENST00000630224 FMN1Q68DA7 1419 aa9.57□□□□□ -0.88
TCF4-269ENST00000630224 CNTLNQ9NXG0 1405 aa9.57□□□□□ -0.88
TCF4-269ENST00000630224 TMEM121BQ9BXQ6 578 aaPredicted RBP9.57□□□□□ -0.88
TCF4-269ENST00000630224 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
TCF4-269ENST00000630224 ZNF142P52746 1687 aaPredicted RBP9.56□□□□□ -0.88
TCF4-269ENST00000630224 CEP170BQ9Y4F5 1589 aaPredicted RBP9.56□□□□□ -0.88
TCF4-269ENST00000630224 NPATQ14207 1427 aa9.56□□□□□ -0.88
TCF4-269ENST00000630224 HNRNPMP52272 730 aaKnown RBP eCLIP9.55□□□□□ -0.88
TCF4-269ENST00000630224 GGT6Q6P531 493 aa9.55□□□□□ -0.88
TCF4-269ENST00000630224 SAMD9LQ8IVG5 1584 aa9.54□□□□□ -0.88
TCF4-269ENST00000630224 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
TCF4-269ENST00000630224 FAM163AQ96GL9 167 aaPredicted RBP9.54□□□□□ -0.88
TCF4-269ENST00000630224 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.54□□□□□ -0.88
TCF4-269ENST00000630224 SYCP2Q9BX26 1530 aa9.53□□□□□ -0.88
TCF4-269ENST00000630224 BBXQ8WY36 941 aaPredicted RBP9.53□□□□□ -0.88
TCF4-269ENST00000630224 POLR1AO95602 1720 aaPredicted RBP9.53□□□□□ -0.88
TCF4-269ENST00000630224 SPAG9O60271 1321 aaKnown RBP9.53□□□□□ -0.88
TCF4-269ENST00000630224 TCOF1Q13428 1488 aaKnown RBP9.53□□□□□ -0.88
TCF4-269ENST00000630224 PTPRKQ15262 1439 aa9.52□□□□□ -0.89
TCF4-269ENST00000630224 PLA2R1Q13018 1463 aa9.52□□□□□ -0.89
TCF4-269ENST00000630224 TOM1O60784 492 aa9.51□□□□□ -0.89
TCF4-269ENST00000630224 PPP1R37O75864 691 aa9.51□□□□□ -0.89
TCF4-269ENST00000630224 DNMT1P26358 1616 aaKnown RBP9.51□□□□□ -0.89
TCF4-269ENST00000630224 ATP7AQ04656 1500 aa9.51□□□□□ -0.89
TCF4-269ENST00000630224 TMC2Q8TDI7 906 aa9.5□□□□□ -0.89
TCF4-269ENST00000630224 A2MP01023 1474 aa9.49□□□□□ -0.89
TCF4-269ENST00000630224 SHANK2Q9UPX8 1470 aa9.49□□□□□ -0.89
TCF4-269ENST00000630224 NEURL4Q96JN8 1562 aa9.49□□□□□ -0.89
TCF4-269ENST00000630224 CASKIN1Q8WXD9 1431 aa9.48□□□□□ -0.89
TCF4-269ENST00000630224 FBXO31Q5XUX0 539 aaPredicted RBP9.48□□□□□ -0.89
TCF4-269ENST00000630224 ZNF710Q8N1W2 664 aa9.48□□□□□ -0.89
TCF4-269ENST00000630224 PLXNC1O60486 1568 aa9.48□□□□□ -0.89
TCF4-269ENST00000630224 INO80Q9ULG1 1556 aaPredicted RBP9.48□□□□□ -0.89
TCF4-269ENST00000630224 A2ML1A8K2U0 1454 aa9.47□□□□□ -0.89
TCF4-269ENST00000630224 FYCO1Q9BQS8 1478 aa9.47□□□□□ -0.89
TCF4-269ENST00000630224 CPS1P31327 1500 aa9.47□□□□□ -0.89
TCF4-269ENST00000630224 ALKQ9UM73 1620 aa9.47□□□□□ -0.89
TCF4-269ENST00000630224 RIMBP2O15034 1052 aa9.47□□□□□ -0.89
TCF4-269ENST00000630224 GTPBP6O43824 516 aaPredicted RBP9.47□□□□□ -0.89
TCF4-269ENST00000630224 DOK7Q18PE1 504 aa9.47□□□□□ -0.89
TCF4-269ENST00000630224 ADGBQ8N7X0 1667 aa9.47□□□□□ -0.89
TCF4-269ENST00000630224 CCDC18Q5T9S5 1454 aa9.47□□□□□ -0.89
TCF4-269ENST00000630224 STRCP1A6NGW2 1772 aa9.46□□□□□ -0.9
TCF4-269ENST00000630224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.46□□□□□ -0.9
TCF4-269ENST00000630224 GPATCH8Q9UKJ3 1502 aaKnown RBP9.46□□□□□ -0.9
TCF4-269ENST00000630224 CFDP1Q9UEE9 299 aaPredicted RBP9.45□□□□□ -0.9
TCF4-269ENST00000630224 VWDEQ8N2E2 1590 aa9.45□□□□□ -0.9
TCF4-269ENST00000630224 TMEM92Q6UXU6 159 aa9.44□□□□□ -0.9
TCF4-269ENST00000630224 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
TCF4-269ENST00000630224 ZNF644Q9H582 1327 aaPredicted RBP9.44□□□□□ -0.9
TCF4-269ENST00000630224 TNRQ92752 1358 aa9.44□□□□□ -0.9
TCF4-269ENST00000630224 ANKLE2Q86XL3 938 aa9.43□□□□□ -0.9
TCF4-269ENST00000630224 CFAP44Q96MT7 982 aa9.43□□□□□ -0.9
TCF4-269ENST00000630224 CFAP65Q6ZU64 1925 aaKnown RBP9.43□□□□□ -0.9
TCF4-269ENST00000630224 MAP3K1Q13233 1512 aa9.42□□□□□ -0.9
TCF4-269ENST00000630224 C2orf72A6NCS6 295 aa9.42□□□□□ -0.9
TCF4-269ENST00000630224 KIF3BO15066 747 aa9.42□□□□□ -0.9
TCF4-269ENST00000630224 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
TCF4-269ENST00000630224 RGS17Q9UGC6 210 aaPredicted RBP9.42□□□□□ -0.9
TCF4-269ENST00000630224 IQGAP1P46940 1657 aa9.42□□□□□ -0.9
TCF4-269ENST00000630224 NPHP4O75161 1426 aaPredicted RBP9.41□□□□□ -0.9
TCF4-269ENST00000630224 CCNB3Q8WWL7 1395 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms