RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 KDM5AP29375 1690 aaKnown RBP10.31□□□□□ -0.76
LINC00649-220ENST00000628906 C19orf44Q9H6X5 657 aa10.31□□□□□ -0.76
LINC00649-220ENST00000628906 UTRNP46939 3433 aa10.31□□□□□ -0.76
LINC00649-220ENST00000628906 RTEL1-TNFRSF6BF6WH68 1400 aa10.31□□□□□ -0.76
LINC00649-220ENST00000628906 TMEM2Q9UHN6 1383 aa10.3□□□□□ -0.76
LINC00649-220ENST00000628906 DCAF8L1A6NGE4 600 aa10.3□□□□□ -0.76
LINC00649-220ENST00000628906 CDC42BPAQ5VT25 1732 aa10.3□□□□□ -0.76
LINC00649-220ENST00000628906 ADAMTS2O95450 1211 aa10.29□□□□□ -0.76
LINC00649-220ENST00000628906 ERVK-7P63135 1459 aa10.29□□□□□ -0.76
LINC00649-220ENST00000628906 PLEKHH2Q8IVE3 1493 aa10.29□□□□□ -0.76
LINC00649-220ENST00000628906 PNPLA6Q8IY17 1366 aa10.28□□□□□ -0.76
LINC00649-220ENST00000628906 FMN1Q68DA7 1419 aa10.28□□□□□ -0.76
LINC00649-220ENST00000628906 ATF3P18847 181 aa10.28□□□□□ -0.76
LINC00649-220ENST00000628906 R3HDM1Q15032 1099 aaKnown RBP10.27□□□□□ -0.77
LINC00649-220ENST00000628906 CSRNP3Q8WYN3 585 aa10.27□□□□□ -0.77
LINC00649-220ENST00000628906 GJD4Q96KN9 370 aaPredicted RBP10.27□□□□□ -0.77
LINC00649-220ENST00000628906 PCDH10Q9P2E7 1040 aa10.27□□□□□ -0.77
LINC00649-220ENST00000628906 GPATCH8Q9UKJ3 1502 aaKnown RBP10.27□□□□□ -0.77
LINC00649-220ENST00000628906 MAST1Q9Y2H9 1570 aa10.26□□□□□ -0.77
LINC00649-220ENST00000628906 MROH1Q8NDA8 1641 aa10.25□□□□□ -0.77
LINC00649-220ENST00000628906 ARHGAP35Q9NRY4 1499 aa10.25□□□□□ -0.77
LINC00649-220ENST00000628906 BAG6P46379 1132 aa10.24□□□□□ -0.77
LINC00649-220ENST00000628906 CFDP1Q9UEE9 299 aaPredicted RBP10.24□□□□□ -0.77
LINC00649-220ENST00000628906 CAMSAP2Q08AD1 1489 aa10.23□□□□□ -0.77
LINC00649-220ENST00000628906 C14orf37Q86TY3 774 aa10.23□□□□□ -0.77
LINC00649-220ENST00000628906 UNC13BO14795 1591 aa10.22□□□□□ -0.77
LINC00649-220ENST00000628906 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.22□□□□□ -0.77
LINC00649-220ENST00000628906 PTCH1Q13635 1447 aa10.22□□□□□ -0.77
LINC00649-220ENST00000628906 MBD5Q9P267 1494 aa10.21□□□□□ -0.78
LINC00649-220ENST00000628906 CHD2O14647 1828 aaKnown RBP10.21□□□□□ -0.78
LINC00649-220ENST00000628906 ASXL1Q8IXJ9 1541 aa10.2□□□□□ -0.78
LINC00649-220ENST00000628906 NINLQ9Y2I6 1382 aa10.2□□□□□ -0.78
LINC00649-220ENST00000628906 DDX17Q92841 729 aaKnown RBP10.19□□□□□ -0.78
LINC00649-220ENST00000628906 EHMT2Q96KQ7 1210 aa10.19□□□□□ -0.78
LINC00649-220ENST00000628906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00649-220ENST00000628906 CFAP65Q6ZU64 1925 aaKnown RBP10.19□□□□□ -0.78
LINC00649-220ENST00000628906 LRRIQ1Q96JM4 1722 aa10.19□□□□□ -0.78
LINC00649-220ENST00000628906 EN1Q05925 392 aaPredicted RBP10.18□□□□□ -0.78
LINC00649-220ENST00000628906 STAG3Q9UJ98 1225 aa10.18□□□□□ -0.78
LINC00649-220ENST00000628906 TBX22Q9Y458 520 aa10.18□□□□□ -0.78
LINC00649-220ENST00000628906 SPHKAPQ2M3C7 1700 aa10.18□□□□□ -0.78
LINC00649-220ENST00000628906 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
LINC00649-220ENST00000628906 ZNF644Q9H582 1327 aaPredicted RBP10.17□□□□□ -0.78
LINC00649-220ENST00000628906 ONECUT3O60422 494 aaPredicted RBP10.17□□□□□ -0.78
LINC00649-220ENST00000628906 PPP1R15AO75807 674 aaPredicted RBP10.17□□□□□ -0.78
LINC00649-220ENST00000628906 IDI1Q13907 227 aa10.16□□□□□ -0.78
LINC00649-220ENST00000628906 SEPT12Q8IYM1 358 aa10.16□□□□□ -0.78
LINC00649-220ENST00000628906 BCANQ96GW7 911 aa10.16□□□□□ -0.78
LINC00649-220ENST00000628906 DCCP43146 1447 aa10.16□□□□□ -0.78
LINC00649-220ENST00000628906 KRT27Q7Z3Y8 459 aa10.15□□□□□ -0.78
LINC00649-220ENST00000628906 ARHGAP31Q2M1Z3 1444 aa10.15□□□□□ -0.79
LINC00649-220ENST00000628906 PIK3C2BO00750 1634 aa10.15□□□□□ -0.79
LINC00649-220ENST00000628906 BRWD3Q6RI45 1802 aa10.14□□□□□ -0.79
LINC00649-220ENST00000628906 EFCAB6Q5THR3 1501 aa10.14□□□□□ -0.79
LINC00649-220ENST00000628906 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
LINC00649-220ENST00000628906 PPP1R1BQ9UD71 204 aaPredicted RBP10.14□□□□□ -0.79
LINC00649-220ENST00000628906 MST1RQ04912 1400 aa10.14□□□□□ -0.79
LINC00649-220ENST00000628906 SOS2Q07890 1332 aaPredicted RBP10.13□□□□□ -0.79
LINC00649-220ENST00000628906 CAPN15O75808 1086 aa10.13□□□□□ -0.79
LINC00649-220ENST00000628906 UNC5CLQ8IV45 518 aa10.13□□□□□ -0.79
LINC00649-220ENST00000628906 SPON1Q9HCB6 807 aa10.13□□□□□ -0.79
LINC00649-220ENST00000628906 GLI3P10071 1580 aa10.13□□□□□ -0.79
LINC00649-220ENST00000628906 CCDC18Q5T9S5 1454 aa10.12□□□□□ -0.79
LINC00649-220ENST00000628906 RSPH4AQ5TD94 716 aa10.12□□□□□ -0.79
LINC00649-220ENST00000628906 CCNB3Q8WWL7 1395 aa10.12□□□□□ -0.79
LINC00649-220ENST00000628906 PLEKHG1Q9ULL1 1385 aa10.12□□□□□ -0.79
LINC00649-220ENST00000628906 DISP2A7MBM2 1401 aa10.11□□□□□ -0.79
LINC00649-220ENST00000628906 KCNQ2O43526 872 aa10.11□□□□□ -0.79
LINC00649-220ENST00000628906 PPP4R3CPQ6ZMV5 832 aa10.11□□□□□ -0.79
LINC00649-220ENST00000628906 CAMTA1Q9Y6Y1 1673 aa10.11□□□□□ -0.79
LINC00649-220ENST00000628906 EZH2Q15910 746 aaKnown RBP10.1□□□□□ -0.79
LINC00649-220ENST00000628906 CAMKK2Q96RR4 588 aa10.1□□□□□ -0.79
LINC00649-220ENST00000628906 PIK3R4Q99570 1358 aa10.1□□□□□ -0.79
LINC00649-220ENST00000628906 MTUS2Q5JR59 1369 aa10.09□□□□□ -0.79
LINC00649-220ENST00000628906 CHD4Q14839 1912 aa10.09□□□□□ -0.79
LINC00649-220ENST00000628906 PRELPP51888 382 aa10.08□□□□□ -0.8
LINC00649-220ENST00000628906 MYOM2P54296 1465 aa10.08□□□□□ -0.8
LINC00649-220ENST00000628906 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.07□□□□□ -0.8
LINC00649-220ENST00000628906 HDGFP51858 240 aaKnown RBP10.07□□□□□ -0.8
LINC00649-220ENST00000628906 AMOTL2Q9Y2J4 779 aa10.07□□□□□ -0.8
LINC00649-220ENST00000628906 SLIT2O94813 1529 aa10.07□□□□□ -0.8
LINC00649-220ENST00000628906 CASKIN1Q8WXD9 1431 aa10.07□□□□□ -0.8
LINC00649-220ENST00000628906 LAMC1P11047 1609 aa10.06□□□□□ -0.8
LINC00649-220ENST00000628906 COL22A1Q8NFW1 1626 aaPredicted RBP10.06□□□□□ -0.8
LINC00649-220ENST00000628906 ZFYVE9O95405 1425 aa10.06□□□□□ -0.8
LINC00649-220ENST00000628906 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
LINC00649-220ENST00000628906 VPS72Q15906 364 aa10.05□□□□□ -0.8
LINC00649-220ENST00000628906 TSPY4P0CV99 314 aa10.04□□□□□ -0.8
LINC00649-220ENST00000628906 TSPY10P0CW01 314 aa10.04□□□□□ -0.8
LINC00649-220ENST00000628906 HSPA6P17066 643 aa10.04□□□□□ -0.8
LINC00649-220ENST00000628906 SLC52A1Q9NWF4 448 aa10.04□□□□□ -0.8
LINC00649-220ENST00000628906 ADAMTS13Q76LX8 1427 aa10.04□□□□□ -0.8
LINC00649-220ENST00000628906 CEP152O94986 1710 aa10.04□□□□□ -0.8
LINC00649-220ENST00000628906 PARD3Q8TEW0 1356 aa10.03□□□□□ -0.8
LINC00649-220ENST00000628906 MAPK8IP2Q13387 824 aaPredicted RBP10.03□□□□□ -0.8
LINC00649-220ENST00000628906 NBPF8Q3BBV2 869 aa10.03□□□□□ -0.8
LINC00649-220ENST00000628906 NBPF14Q5TI25 921 aa10.03□□□□□ -0.8
LINC00649-220ENST00000628906 MARF1Q9Y4F3 1742 aaKnown RBP10.02□□□□□ -0.8
LINC00649-220ENST00000628906 COL13A1Q5TAT6 717 aaPredicted RBP10.02□□□□□ -0.81
LINC00649-220ENST00000628906 ADGRB3O60242 1522 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms