RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 TET3O43151 1660 aa20.82■□□□□ 0.92
TCF4-262ENST00000628078 ADGRB3O60242 1522 aa20.81■□□□□ 0.92
TCF4-262ENST00000628078 KDM5AP29375 1690 aaKnown RBP20.8■□□□□ 0.92
TCF4-262ENST00000628078 PPP1R15AO75807 674 aaPredicted RBP20.8■□□□□ 0.92
TCF4-262ENST00000628078 GCC2Q8IWJ2 1684 aa20.77■□□□□ 0.92
TCF4-262ENST00000628078 RIMS2Q9UQ26 1411 aa20.76■□□□□ 0.91
TCF4-262ENST00000628078 RGS17Q9UGC6 210 aaPredicted RBP20.75■□□□□ 0.91
TCF4-262ENST00000628078 FAM135BQ49AJ0 1406 aa20.73■□□□□ 0.91
TCF4-262ENST00000628078 RPRD2Q5VT52 1461 aaKnown RBP20.73■□□□□ 0.91
TCF4-262ENST00000628078 ZFYVE9O95405 1425 aa20.72■□□□□ 0.91
TCF4-262ENST00000628078 TMEM131LA2VDJ0 1609 aa20.72■□□□□ 0.91
TCF4-262ENST00000628078 E9PCH4 1651 aa20.72■□□□□ 0.91
TCF4-262ENST00000628078 ROBO1Q9Y6N7 1651 aa20.72■□□□□ 0.91
TCF4-262ENST00000628078 HDGFP51858 240 aaKnown RBP20.71■□□□□ 0.91
TCF4-262ENST00000628078 UNC13BO14795 1591 aa20.7■□□□□ 0.9
TCF4-262ENST00000628078 NUP155O75694 1391 aa20.7■□□□□ 0.9
TCF4-262ENST00000628078 PLEKHG1Q9ULL1 1385 aa20.7■□□□□ 0.9
TCF4-262ENST00000628078 C14orf37Q86TY3 774 aa20.69■□□□□ 0.9
TCF4-262ENST00000628078 SLAIN2Q9P270 581 aa20.69■□□□□ 0.9
TCF4-262ENST00000628078 MSH6P52701 1360 aa20.69■□□□□ 0.9
TCF4-262ENST00000628078 CHD2O14647 1828 aaKnown RBP20.69■□□□□ 0.9
TCF4-262ENST00000628078 NWD1Q149M9 1564 aa20.68■□□□□ 0.9
TCF4-262ENST00000628078 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.66■□□□□ 0.9
TCF4-262ENST00000628078 TBX22Q9Y458 520 aa20.66■□□□□ 0.9
TCF4-262ENST00000628078 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
TCF4-262ENST00000628078 ROCK1Q13464 1354 aa20.65■□□□□ 0.9
TCF4-262ENST00000628078 POTEAQ6S8J7 498 aa20.64■□□□□ 0.89
TCF4-262ENST00000628078 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.89
TCF4-262ENST00000628078 ADAMTS13Q76LX8 1427 aa20.61■□□□□ 0.89
TCF4-262ENST00000628078 PHLPP1O60346 1717 aa20.61■□□□□ 0.89
TCF4-262ENST00000628078 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
TCF4-262ENST00000628078 AMOTL2Q9Y2J4 779 aa20.59■□□□□ 0.89
TCF4-262ENST00000628078 ATF3P18847 181 aa20.56■□□□□ 0.88
TCF4-262ENST00000628078 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.56■□□□□ 0.88
TCF4-262ENST00000628078 PTPRUQ92729 1446 aa20.55■□□□□ 0.88
TCF4-262ENST00000628078 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
TCF4-262ENST00000628078 JCADQ9P266 1359 aa20.52■□□□□ 0.88
TCF4-262ENST00000628078 CADPS2Q86UW7 1296 aa20.52■□□□□ 0.88
TCF4-262ENST00000628078 SPHKAPQ2M3C7 1700 aa20.52■□□□□ 0.88
TCF4-262ENST00000628078 TRPM2O94759 1503 aa20.51■□□□□ 0.87
TCF4-262ENST00000628078 DIP2AQ14689 1571 aa20.5■□□□□ 0.87
TCF4-262ENST00000628078 COL16A1Q07092 1604 aaPredicted RBP20.49■□□□□ 0.87
TCF4-262ENST00000628078 PIK3R4Q99570 1358 aa20.49■□□□□ 0.87
TCF4-262ENST00000628078 MEX3CQ5U5Q3 659 aaKnown RBP20.49■□□□□ 0.87
TCF4-262ENST00000628078 TRIM52Q96A61 297 aa20.49■□□□□ 0.87
TCF4-262ENST00000628078 NCOA3Q9Y6Q9 1424 aa20.49■□□□□ 0.87
TCF4-262ENST00000628078 NUTM2BA6NNL0 878 aaPredicted RBP20.48■□□□□ 0.87
TCF4-262ENST00000628078 NUTM2EB1AL46 878 aaPredicted RBP20.48■□□□□ 0.87
TCF4-262ENST00000628078 NUTM2AQ8IVF1 878 aaPredicted RBP20.48■□□□□ 0.87
TCF4-262ENST00000628078 METP08581 1390 aa20.47■□□□□ 0.87
TCF4-262ENST00000628078 NRXN3Q9Y4C0 1643 aa20.47■□□□□ 0.87
TCF4-262ENST00000628078 BRINP3Q76B58 766 aa20.47■□□□□ 0.87
TCF4-262ENST00000628078 DDX17Q92841 729 aaKnown RBP20.45■□□□□ 0.86
TCF4-262ENST00000628078 LRP6O75581 1613 aa20.45■□□□□ 0.86
TCF4-262ENST00000628078 CLTCL1P53675 1640 aa20.45■□□□□ 0.86
TCF4-262ENST00000628078 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
TCF4-262ENST00000628078 NAIPQ13075 1403 aa20.42■□□□□ 0.86
TCF4-262ENST00000628078 SPATA31A6Q5VVP1 1343 aa20.41■□□□□ 0.86
TCF4-262ENST00000628078 SETBP1Q9Y6X0 1596 aa20.41■□□□□ 0.86
TCF4-262ENST00000628078 KIF1BO60333 1816 aa20.4■□□□□ 0.86
TCF4-262ENST00000628078 AHDC1Q5TGY3 1603 aaPredicted RBP20.4■□□□□ 0.86
TCF4-262ENST00000628078 XRN1Q8IZH2 1706 aaKnown RBP20.4■□□□□ 0.86
TCF4-262ENST00000628078 NEXMIFQ5QGS0 1516 aa20.39■□□□□ 0.85
TCF4-262ENST00000628078 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
TCF4-262ENST00000628078 FOXD1Q16676 465 aa20.38■□□□□ 0.85
TCF4-262ENST00000628078 SLC4A1APQ9BWU0 796 aaKnown RBP20.37■□□□□ 0.85
TCF4-262ENST00000628078 MST1RQ04912 1400 aa20.36■□□□□ 0.85
TCF4-262ENST00000628078 ASXL1Q8IXJ9 1541 aa20.36■□□□□ 0.85
TCF4-262ENST00000628078 SHPRHQ149N8 1683 aa20.35■□□□□ 0.85
TCF4-262ENST00000628078 ZNF772Q68DY9 489 aaPredicted RBP20.35■□□□□ 0.85
TCF4-262ENST00000628078 NALCNQ8IZF0 1738 aa20.33■□□□□ 0.84
TCF4-262ENST00000628078 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
TCF4-262ENST00000628078 DCCP43146 1447 aa20.32■□□□□ 0.84
TCF4-262ENST00000628078 ADGRL3Q9HAR2 1447 aa20.31■□□□□ 0.84
TCF4-262ENST00000628078 LRRC59Q96AG4 307 aaKnown RBP20.31■□□□□ 0.84
TCF4-262ENST00000628078 AFF2P51816 1311 aa20.3■□□□□ 0.84
TCF4-262ENST00000628078 RXRBP28702 533 aa20.3■□□□□ 0.84
TCF4-262ENST00000628078 C8orf37Q96NL8 207 aa20.3■□□□□ 0.84
TCF4-262ENST00000628078 ORAI2Q96SN7 254 aa20.3■□□□□ 0.84
TCF4-262ENST00000628078 NHSL1Q5SYE7 1610 aa20.29■□□□□ 0.84
TCF4-262ENST00000628078 RGL3Q3MIN7 710 aa20.29■□□□□ 0.84
TCF4-262ENST00000628078 ROBO2Q9HCK4 1378 aa20.29■□□□□ 0.84
TCF4-262ENST00000628078 HFM1A2PYH4 1435 aa20.27■□□□□ 0.84
TCF4-262ENST00000628078 SETD5Q9C0A6 1442 aa20.27■□□□□ 0.84
TCF4-262ENST00000628078 ADAMTS2O95450 1211 aa20.27■□□□□ 0.84
TCF4-262ENST00000628078 C1orf167Q5SNV9 1468 aa20.25■□□□□ 0.83
TCF4-262ENST00000628078 UPF1Q92900 1129 aaKnown RBP eCLIP20.25■□□□□ 0.83
TCF4-262ENST00000628078 STK26Q9P289 416 aa20.25■□□□□ 0.83
TCF4-262ENST00000628078 PNPLA6Q8IY17 1366 aa20.24■□□□□ 0.83
TCF4-262ENST00000628078 RPGRIP1LQ68CZ1 1315 aa20.24■□□□□ 0.83
TCF4-262ENST00000628078 PPLO60437 1756 aa20.23■□□□□ 0.83
TCF4-262ENST00000628078 NUTM2FA1L443 756 aa20.23■□□□□ 0.83
TCF4-262ENST00000628078 QTRT2Q9H974 415 aaKnown RBP20.23■□□□□ 0.83
TCF4-262ENST00000628078 ADGRF5Q8IZF2 1346 aa20.23■□□□□ 0.83
TCF4-262ENST00000628078 NGLY1Q96IV0 654 aa20.22■□□□□ 0.83
TCF4-262ENST00000628078 TMEM132EQ6IEE7 984 aa20.2■□□□□ 0.82
TCF4-262ENST00000628078 WAPLQ7Z5K2 1190 aa20.2■□□□□ 0.82
TCF4-262ENST00000628078 XPCQ01831 940 aaPredicted RBP20.19■□□□□ 0.82
TCF4-262ENST00000628078 ESCO1Q5FWF5 840 aa20.19■□□□□ 0.82
TCF4-262ENST00000628078 MPHOSPH9Q99550 1183 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms