RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 CFAP70Q5T0N1 1121 aa19■□□□□ 0.63
PDXDC1-218ENST00000627450 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
PDXDC1-218ENST00000627450 TMEM131LA2VDJ0 1609 aa19■□□□□ 0.63
PDXDC1-218ENST00000627450 PPLO60437 1756 aa18.98■□□□□ 0.63
PDXDC1-218ENST00000627450 ST20-MTHFSA0A0A6YYL1 179 aa18.98■□□□□ 0.63
PDXDC1-218ENST00000627450 TNRQ92752 1358 aa18.97■□□□□ 0.63
PDXDC1-218ENST00000627450 C3P01024 1663 aa18.97■□□□□ 0.63
PDXDC1-218ENST00000627450 STAC3Q96MF2 364 aa18.97■□□□□ 0.63
PDXDC1-218ENST00000627450 MYOM2P54296 1465 aa18.96■□□□□ 0.63
PDXDC1-218ENST00000627450 NEXMIFQ5QGS0 1516 aa18.96■□□□□ 0.63
PDXDC1-218ENST00000627450 WASHC2AQ641Q2 1341 aa18.96■□□□□ 0.63
PDXDC1-218ENST00000627450 GPRASP1Q5JY77 1395 aa18.95■□□□□ 0.62
PDXDC1-218ENST00000627450 RPGRIP1LQ68CZ1 1315 aa18.95■□□□□ 0.62
PDXDC1-218ENST00000627450 A2ML1A8K2U0 1454 aa18.93■□□□□ 0.62
PDXDC1-218ENST00000627450 NRXN1Q9ULB1 1477 aa18.93■□□□□ 0.62
PDXDC1-218ENST00000627450 VGFO15240 615 aaPredicted RBP18.93■□□□□ 0.62
PDXDC1-218ENST00000627450 RIMS1Q86UR5 1692 aaKnown RBP18.92■□□□□ 0.62
PDXDC1-218ENST00000627450 PIK3C2GO75747 1445 aa18.92■□□□□ 0.62
PDXDC1-218ENST00000627450 TMEM132EQ6IEE7 984 aa18.92■□□□□ 0.62
PDXDC1-218ENST00000627450 POLR3GLQ9BT43 218 aa18.91■□□□□ 0.62
PDXDC1-218ENST00000627450 MIER1Q8N108 512 aa18.89■□□□□ 0.61
PDXDC1-218ENST00000627450 C14orf93Q9H972 538 aaKnown RBP18.88■□□□□ 0.61
PDXDC1-218ENST00000627450 KIF7Q2M1P5 1343 aa18.88■□□□□ 0.61
PDXDC1-218ENST00000627450 ADAMTSL3P82987 1691 aa18.87■□□□□ 0.61
PDXDC1-218ENST00000627450 CCDC7Q96M83 1385 aa18.87■□□□□ 0.61
PDXDC1-218ENST00000627450 RIMS2Q9UQ26 1411 aa18.86■□□□□ 0.61
PDXDC1-218ENST00000627450 LAMC1P11047 1609 aa18.85■□□□□ 0.61
PDXDC1-218ENST00000627450 KIAA1210Q9ULL0 1709 aa18.85■□□□□ 0.61
PDXDC1-218ENST00000627450 TRAK1Q9UPV9 953 aa18.84■□□□□ 0.61
PDXDC1-218ENST00000627450 UBR1Q8IWV7 1749 aa18.84■□□□□ 0.61
PDXDC1-218ENST00000627450 TESK2Q96S53 571 aa18.84■□□□□ 0.61
PDXDC1-218ENST00000627450 SCAF11Q99590 1463 aaKnown RBP18.83■□□□□ 0.61
PDXDC1-218ENST00000627450 ZFYVE9O95405 1425 aa18.83■□□□□ 0.61
PDXDC1-218ENST00000627450 IQGAP1P46940 1657 aa18.83■□□□□ 0.6
PDXDC1-218ENST00000627450 NLRP1Q9C000 1473 aa18.82■□□□□ 0.6
PDXDC1-218ENST00000627450 ADGRB1O14514 1584 aa18.81■□□□□ 0.6
PDXDC1-218ENST00000627450 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
PDXDC1-218ENST00000627450 STK26Q9P289 416 aa18.8■□□□□ 0.6
PDXDC1-218ENST00000627450 LTKP29376 864 aa18.8■□□□□ 0.6
PDXDC1-218ENST00000627450 DISP3Q9P2K9 1392 aa18.79■□□□□ 0.6
PDXDC1-218ENST00000627450 BCANQ96GW7 911 aa18.78■□□□□ 0.6
PDXDC1-218ENST00000627450 MYO3AQ8NEV4 1616 aa18.78■□□□□ 0.6
PDXDC1-218ENST00000627450 POLR1AO95602 1720 aaPredicted RBP18.77■□□□□ 0.6
PDXDC1-218ENST00000627450 SETBP1Q9Y6X0 1596 aa18.77■□□□□ 0.6
PDXDC1-218ENST00000627450 ASXL1Q8IXJ9 1541 aa18.77■□□□□ 0.59
PDXDC1-218ENST00000627450 TXNDC2Q86VQ3 553 aa18.76■□□□□ 0.59
PDXDC1-218ENST00000627450 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.76■□□□□ 0.59
PDXDC1-218ENST00000627450 ALKQ9UM73 1620 aa18.76■□□□□ 0.59
PDXDC1-218ENST00000627450 SAFB2Q14151 953 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDXDC1-218ENST00000627450 PTPRMP28827 1452 aa18.75■□□□□ 0.59
PDXDC1-218ENST00000627450 KDM5AP29375 1690 aaKnown RBP18.75■□□□□ 0.59
PDXDC1-218ENST00000627450 EIF3AQ14152 1382 aaKnown RBP18.74■□□□□ 0.59
PDXDC1-218ENST00000627450 THEMISQ8N1K5 641 aaPredicted RBP18.74■□□□□ 0.59
PDXDC1-218ENST00000627450 TMF1P82094 1093 aa18.73■□□□□ 0.59
PDXDC1-218ENST00000627450 HDGFP51858 240 aaKnown RBP18.73■□□□□ 0.59
PDXDC1-218ENST00000627450 CEP170BQ9Y4F5 1589 aaPredicted RBP18.72■□□□□ 0.59
PDXDC1-218ENST00000627450 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
PDXDC1-218ENST00000627450 CNGB1Q14028 1251 aaPredicted RBP18.72■□□□□ 0.59
PDXDC1-218ENST00000627450 SETD1BQ9UPS6 1966 aaKnown RBP18.71■□□□□ 0.59
PDXDC1-218ENST00000627450 CENPJQ9HC77 1338 aaPredicted RBP18.71■□□□□ 0.59
PDXDC1-218ENST00000627450 METP08581 1390 aa18.71■□□□□ 0.59
PDXDC1-218ENST00000627450 SLC26A8Q96RN1 970 aa18.71■□□□□ 0.59
PDXDC1-218ENST00000627450 EID1Q9Y6B2 187 aa18.7■□□□□ 0.58
PDXDC1-218ENST00000627450 YTHDC2Q9H6S0 1430 aaKnown RBP18.7■□□□□ 0.58
PDXDC1-218ENST00000627450 SETD1AO15047 1707 aaKnown RBP18.68■□□□□ 0.58
PDXDC1-218ENST00000627450 SLIT1O75093 1534 aa18.68■□□□□ 0.58
PDXDC1-218ENST00000627450 ARHGAP23Q9P227 1491 aa18.68■□□□□ 0.58
PDXDC1-218ENST00000627450 KDM4FA0A1W2PPD8 638 aa18.67■□□□□ 0.58
PDXDC1-218ENST00000627450 ARHGEF28Q8N1W1 1705 aaKnown RBP18.67■□□□□ 0.58
PDXDC1-218ENST00000627450 PRAM1Q96QH2 718 aa18.67■□□□□ 0.58
PDXDC1-218ENST00000627450 ADAMTS13Q76LX8 1427 aa18.66■□□□□ 0.58
PDXDC1-218ENST00000627450 ANP32CO43423 234 aa18.66■□□□□ 0.58
PDXDC1-218ENST00000627450 WAPLQ7Z5K2 1190 aa18.66■□□□□ 0.58
PDXDC1-218ENST00000627450 PLEKHG1Q9ULL1 1385 aa18.65■□□□□ 0.58
PDXDC1-218ENST00000627450 QRICH2Q9H0J4 1663 aa18.65■□□□□ 0.58
PDXDC1-218ENST00000627450 POGKQ9P215 609 aa18.64■□□□□ 0.57
PDXDC1-218ENST00000627450 MINK1Q8N4C8 1332 aaPredicted RBP18.63■□□□□ 0.57
PDXDC1-218ENST00000627450 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
PDXDC1-218ENST00000627450 ZNF142P52746 1687 aaPredicted RBP18.62■□□□□ 0.57
PDXDC1-218ENST00000627450 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
PDXDC1-218ENST00000627450 PANK3Q9H999 370 aa18.6■□□□□ 0.57
PDXDC1-218ENST00000627450 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
PDXDC1-218ENST00000627450 ANKLE2Q86XL3 938 aa18.6■□□□□ 0.57
PDXDC1-218ENST00000627450 CDCA8Q53HL2 280 aa18.58■□□□□ 0.57
PDXDC1-218ENST00000627450 ABCC11Q96J66 1382 aa18.58■□□□□ 0.56
PDXDC1-218ENST00000627450 CABP2Q9NPB3 220 aa18.58■□□□□ 0.56
PDXDC1-218ENST00000627450 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
PDXDC1-218ENST00000627450 MED14O60244 1454 aa18.57■□□□□ 0.56
PDXDC1-218ENST00000627450 PTPRUQ92729 1446 aa18.56■□□□□ 0.56
PDXDC1-218ENST00000627450 TULP4Q9NRJ4 1543 aa18.56■□□□□ 0.56
PDXDC1-218ENST00000627450 PRKRIP1Q9H875 184 aaPredicted RBP18.56■□□□□ 0.56
PDXDC1-218ENST00000627450 NCKAP5LQ9HCH0 1330 aa18.55■□□□□ 0.56
PDXDC1-218ENST00000627450 PER1O15534 1290 aaPredicted RBP18.55■□□□□ 0.56
PDXDC1-218ENST00000627450 HSPA2P54652 639 aa18.55■□□□□ 0.56
PDXDC1-218ENST00000627450 TBX22Q9Y458 520 aa18.55■□□□□ 0.56
PDXDC1-218ENST00000627450 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
PDXDC1-218ENST00000627450 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
PDXDC1-218ENST00000627450 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
PDXDC1-218ENST00000627450 SLC24A1O60721 1099 aa18.54■□□□□ 0.56
PDXDC1-218ENST00000627450 AMOTL2Q9Y2J4 779 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms