RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
TCF4-254ENST00000626584 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
TCF4-254ENST00000626584 MAP3K4Q9Y6R4 1608 aa13.41□□□□□ -0.26
TCF4-254ENST00000626584 MYOM1P52179 1685 aa13.41□□□□□ -0.26
TCF4-254ENST00000626584 KIF1BO60333 1816 aa13.41□□□□□ -0.26
TCF4-254ENST00000626584 EFCAB6Q5THR3 1501 aa13.41□□□□□ -0.26
TCF4-254ENST00000626584 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
TCF4-254ENST00000626584 NPC1L1Q9UHC9 1359 aa13.41□□□□□ -0.26
TCF4-254ENST00000626584 KIDINS220Q9ULH0 1771 aa13.41□□□□□ -0.26
TCF4-254ENST00000626584 MSH5O43196 834 aa13.4□□□□□ -0.26
TCF4-254ENST00000626584 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
TCF4-254ENST00000626584 CFAP74Q9C0B2 1584 aa13.39□□□□□ -0.27
TCF4-254ENST00000626584 RRP1P56182 461 aaKnown RBP13.39□□□□□ -0.27
TCF4-254ENST00000626584 EIF3AQ14152 1382 aaKnown RBP13.39□□□□□ -0.27
TCF4-254ENST00000626584 KDM5AP29375 1690 aaKnown RBP13.38□□□□□ -0.27
TCF4-254ENST00000626584 ABCA6Q8N139 1617 aa13.38□□□□□ -0.27
TCF4-254ENST00000626584 MYO3AQ8NEV4 1616 aa13.38□□□□□ -0.27
TCF4-254ENST00000626584 ASXL1Q8IXJ9 1541 aa13.38□□□□□ -0.27
TCF4-254ENST00000626584 NRXN1Q9ULB1 1477 aa13.37□□□□□ -0.27
TCF4-254ENST00000626584 CC2D1BQ5T0F9 858 aaKnown RBP13.37□□□□□ -0.27
TCF4-254ENST00000626584 CCDC136Q96JN2 1154 aa13.37□□□□□ -0.27
TCF4-254ENST00000626584 RCAN3Q9UKA8 241 aa13.37□□□□□ -0.27
TCF4-254ENST00000626584 PPRC1Q5VV67 1664 aaKnown RBP13.37□□□□□ -0.27
TCF4-254ENST00000626584 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
TCF4-254ENST00000626584 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
TCF4-254ENST00000626584 MROH2AA6NES4 1674 aa13.35□□□□□ -0.27
TCF4-254ENST00000626584 KIF3BO15066 747 aa13.35□□□□□ -0.27
TCF4-254ENST00000626584 SETBP1Q9Y6X0 1596 aa13.34□□□□□ -0.27
TCF4-254ENST00000626584 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
TCF4-254ENST00000626584 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
TCF4-254ENST00000626584 PPP2R1AP30153 589 aa13.33□□□□□ -0.28
TCF4-254ENST00000626584 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
TCF4-254ENST00000626584 MLH3Q9UHC1 1453 aa13.32□□□□□ -0.28
TCF4-254ENST00000626584 UGGT1Q9NYU2 1555 aa13.32□□□□□ -0.28
TCF4-254ENST00000626584 ERVK-7P63135 1459 aa13.31□□□□□ -0.28
TCF4-254ENST00000626584 POGZQ7Z3K3 1410 aa13.31□□□□□ -0.28
TCF4-254ENST00000626584 FRMPD1Q5SYB0 1578 aa13.3□□□□□ -0.28
TCF4-254ENST00000626584 HECW2Q9P2P5 1572 aa13.3□□□□□ -0.28
TCF4-254ENST00000626584 PPLO60437 1756 aa13.3□□□□□ -0.28
TCF4-254ENST00000626584 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
TCF4-254ENST00000626584 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
TCF4-254ENST00000626584 BCL11AQ9H165 835 aa13.3□□□□□ -0.28
TCF4-254ENST00000626584 KCNA4P22459 653 aa13.29□□□□□ -0.28
TCF4-254ENST00000626584 EXOC6Q8TAG9 804 aa13.29□□□□□ -0.28
TCF4-254ENST00000626584 ZC3H13Q5T200 1668 aaKnown RBP13.29□□□□□ -0.28
TCF4-254ENST00000626584 CDCA7LQ96GN5 454 aa13.28□□□□□ -0.28
TCF4-254ENST00000626584 ADGRF5Q8IZF2 1346 aa13.28□□□□□ -0.28
TCF4-254ENST00000626584 ADAMTS8Q9UP79 889 aa13.27□□□□□ -0.28
TCF4-254ENST00000626584 ZNF521Q96K83 1311 aa13.27□□□□□ -0.28
TCF4-254ENST00000626584 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
TCF4-254ENST00000626584 WDR43Q15061 677 aaKnown RBP eCLIP13.26□□□□□ -0.29
TCF4-254ENST00000626584 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
TCF4-254ENST00000626584 SALL2Q9Y467 1007 aaPredicted RBP13.26□□□□□ -0.29
TCF4-254ENST00000626584 CD109Q6YHK3 1445 aa13.26□□□□□ -0.29
TCF4-254ENST00000626584 NPATQ14207 1427 aa13.25□□□□□ -0.29
TCF4-254ENST00000626584 TCERG1O14776 1098 aaKnown RBP13.25□□□□□ -0.29
TCF4-254ENST00000626584 RPGRIP1LQ68CZ1 1315 aa13.24□□□□□ -0.29
TCF4-254ENST00000626584 ABCC3O15438 1527 aa13.24□□□□□ -0.29
TCF4-254ENST00000626584 PLEKHH1Q9ULM0 1364 aa13.24□□□□□ -0.29
TCF4-254ENST00000626584 NOS1P29475 1434 aa13.24□□□□□ -0.29
TCF4-254ENST00000626584 NEO1Q92859 1461 aa13.24□□□□□ -0.29
TCF4-254ENST00000626584 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
TCF4-254ENST00000626584 ADGRB1O14514 1584 aa13.24□□□□□ -0.29
TCF4-254ENST00000626584 PIK3C2BO00750 1634 aa13.23□□□□□ -0.29
TCF4-254ENST00000626584 CAMSAP1Q5T5Y3 1602 aa13.23□□□□□ -0.29
TCF4-254ENST00000626584 USP32Q8NFA0 1604 aa13.23□□□□□ -0.29
TCF4-254ENST00000626584 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
TCF4-254ENST00000626584 QRICH2Q9H0J4 1663 aa13.23□□□□□ -0.29
TCF4-254ENST00000626584 MS4A1P11836 297 aa13.22□□□□□ -0.29
TCF4-254ENST00000626584 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
TCF4-254ENST00000626584 TRMT2AQ8IZ69 625 aaKnown RBP13.22□□□□□ -0.29
TCF4-254ENST00000626584 HOMEZQ8IX15 550 aa13.21□□□□□ -0.3
TCF4-254ENST00000626584 C14orf93Q9H972 538 aaKnown RBP13.21□□□□□ -0.3
TCF4-254ENST00000626584 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
TCF4-254ENST00000626584 CENPJQ9HC77 1338 aaPredicted RBP13.2□□□□□ -0.3
TCF4-254ENST00000626584 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
TCF4-254ENST00000626584 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
TCF4-254ENST00000626584 ARHGAP31Q2M1Z3 1444 aa13.19□□□□□ -0.3
TCF4-254ENST00000626584 OSCARQ8IYS5 282 aa13.19□□□□□ -0.3
TCF4-254ENST00000626584 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
TCF4-254ENST00000626584 CARD14Q9BXL6 1004 aa13.19□□□□□ -0.3
TCF4-254ENST00000626584 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
TCF4-254ENST00000626584 DIP2CQ9Y2E4 1556 aa13.19□□□□□ -0.3
TCF4-254ENST00000626584 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
TCF4-254ENST00000626584 NOP58Q9Y2X3 529 aaKnown RBP13.19□□□□□ -0.3
TCF4-254ENST00000626584 ANP32AP39687 249 aaKnown RBP13.18□□□□□ -0.3
TCF4-254ENST00000626584 RICTORQ6R327 1708 aa13.17□□□□□ -0.3
TCF4-254ENST00000626584 IPO9Q96P70 1041 aaKnown RBP13.17□□□□□ -0.3
TCF4-254ENST00000626584 SHPRHQ149N8 1683 aa13.17□□□□□ -0.3
TCF4-254ENST00000626584 NEXMIFQ5QGS0 1516 aa13.17□□□□□ -0.3
TCF4-254ENST00000626584 ARHGEF28Q8N1W1 1705 aaKnown RBP13.17□□□□□ -0.3
TCF4-254ENST00000626584 PLIN1O60240 522 aa13.16□□□□□ -0.3
TCF4-254ENST00000626584 GLI2P10070 1586 aa13.16□□□□□ -0.3
TCF4-254ENST00000626584 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.16□□□□□ -0.3
TCF4-254ENST00000626584 CFAP65Q6ZU64 1925 aaKnown RBP13.15□□□□□ -0.3
TCF4-254ENST00000626584 NKTRP30414 1462 aaKnown RBP13.15□□□□□ -0.3
TCF4-254ENST00000626584 ZFYVE9O95405 1425 aa13.15□□□□□ -0.3
TCF4-254ENST00000626584 NSD3Q9BZ95 1437 aa13.14□□□□□ -0.31
TCF4-254ENST00000626584 KDM2BQ8NHM5 1336 aa13.14□□□□□ -0.31
TCF4-254ENST00000626584 TULP1O00294 542 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms