RNA–Protein interactions for RNA: ENST00000625854.1

LEMD1-209, Transcript of LEM domain containing 1, humanhuman

TSL 4

Gene LEMD1, Length 516 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-209ENST00000625854 TMEM94Q12767 1356 aa13.55□□□□□ -0.24
LEMD1-209ENST00000625854 MYO5BQ9ULV0 1848 aa13.55□□□□□ -0.24
LEMD1-209ENST00000625854 NUTM2DQ5VT03 806 aaPredicted RBP13.54□□□□□ -0.24
LEMD1-209ENST00000625854 ADGRB3O60242 1522 aa13.53□□□□□ -0.24
LEMD1-209ENST00000625854 TET3O43151 1660 aa13.52□□□□□ -0.25
LEMD1-209ENST00000625854 RPRD2Q5VT52 1461 aaKnown RBP13.51□□□□□ -0.25
LEMD1-209ENST00000625854 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
LEMD1-209ENST00000625854 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
LEMD1-209ENST00000625854 GCC2Q8IWJ2 1684 aa13.5□□□□□ -0.25
LEMD1-209ENST00000625854 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.49□□□□□ -0.25
LEMD1-209ENST00000625854 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
LEMD1-209ENST00000625854 NUP155O75694 1391 aa13.48□□□□□ -0.25
LEMD1-209ENST00000625854 MSH6P52701 1360 aa13.48□□□□□ -0.25
LEMD1-209ENST00000625854 SLAIN2Q9P270 581 aa13.48□□□□□ -0.25
LEMD1-209ENST00000625854 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
LEMD1-209ENST00000625854 E9PCH4 1651 aa13.47□□□□□ -0.25
LEMD1-209ENST00000625854 TMEM131LA2VDJ0 1609 aa13.46□□□□□ -0.25
LEMD1-209ENST00000625854 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.25
LEMD1-209ENST00000625854 TBX22Q9Y458 520 aa13.46□□□□□ -0.25
LEMD1-209ENST00000625854 ROBO1Q9Y6N7 1651 aa13.46□□□□□ -0.26
LEMD1-209ENST00000625854 ZFYVE9O95405 1425 aa13.46□□□□□ -0.26
LEMD1-209ENST00000625854 ROCK1Q13464 1354 aa13.45□□□□□ -0.26
LEMD1-209ENST00000625854 UNC13BO14795 1591 aa13.45□□□□□ -0.26
LEMD1-209ENST00000625854 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
LEMD1-209ENST00000625854 NKTRP30414 1462 aaKnown RBP13.44□□□□□ -0.26
LEMD1-209ENST00000625854 ZNF326Q5BKZ1 582 aaKnown RBP13.44□□□□□ -0.26
LEMD1-209ENST00000625854 NWD1Q149M9 1564 aa13.42□□□□□ -0.26
LEMD1-209ENST00000625854 ATF3P18847 181 aa13.42□□□□□ -0.26
LEMD1-209ENST00000625854 IQGAP3Q86VI3 1631 aa13.42□□□□□ -0.26
LEMD1-209ENST00000625854 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
LEMD1-209ENST00000625854 PHLPP1O60346 1717 aa13.41□□□□□ -0.26
LEMD1-209ENST00000625854 POTEAQ6S8J7 498 aa13.4□□□□□ -0.26
LEMD1-209ENST00000625854 C19orf44Q9H6X5 657 aa13.4□□□□□ -0.26
LEMD1-209ENST00000625854 CADPS2Q86UW7 1296 aa13.39□□□□□ -0.27
LEMD1-209ENST00000625854 ADAMTS13Q76LX8 1427 aa13.38□□□□□ -0.27
LEMD1-209ENST00000625854 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
LEMD1-209ENST00000625854 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
LEMD1-209ENST00000625854 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.36□□□□□ -0.27
LEMD1-209ENST00000625854 JCADQ9P266 1359 aa13.36□□□□□ -0.27
LEMD1-209ENST00000625854 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
LEMD1-209ENST00000625854 SPHKAPQ2M3C7 1700 aa13.36□□□□□ -0.27
LEMD1-209ENST00000625854 PIK3R4Q99570 1358 aa13.35□□□□□ -0.27
LEMD1-209ENST00000625854 TRPM2O94759 1503 aa13.35□□□□□ -0.27
LEMD1-209ENST00000625854 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
LEMD1-209ENST00000625854 PTPRUQ92729 1446 aa13.33□□□□□ -0.28
LEMD1-209ENST00000625854 NUTM2BA6NNL0 878 aaPredicted RBP13.33□□□□□ -0.28
LEMD1-209ENST00000625854 NUTM2EB1AL46 878 aaPredicted RBP13.33□□□□□ -0.28
LEMD1-209ENST00000625854 NUTM2AQ8IVF1 878 aaPredicted RBP13.33□□□□□ -0.28
LEMD1-209ENST00000625854 BRINP3Q76B58 766 aa13.31□□□□□ -0.28
LEMD1-209ENST00000625854 KIF1BO60333 1816 aa13.31□□□□□ -0.28
LEMD1-209ENST00000625854 COL16A1Q07092 1604 aaPredicted RBP13.3□□□□□ -0.28
LEMD1-209ENST00000625854 SPATA31A6Q5VVP1 1343 aa13.3□□□□□ -0.28
LEMD1-209ENST00000625854 METP08581 1390 aa13.3□□□□□ -0.28
LEMD1-209ENST00000625854 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
LEMD1-209ENST00000625854 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
LEMD1-209ENST00000625854 NAIPQ13075 1403 aa13.28□□□□□ -0.28
LEMD1-209ENST00000625854 NRXN3Q9Y4C0 1643 aa13.28□□□□□ -0.28
LEMD1-209ENST00000625854 VGFO15240 615 aaPredicted RBP13.27□□□□□ -0.29
LEMD1-209ENST00000625854 ZNF772Q68DY9 489 aaPredicted RBP13.27□□□□□ -0.29
LEMD1-209ENST00000625854 DDX17Q92841 729 aaKnown RBP13.27□□□□□ -0.29
LEMD1-209ENST00000625854 RRBP1Q9P2E9 1410 aaKnown RBP13.27□□□□□ -0.29
LEMD1-209ENST00000625854 SETBP1Q9Y6X0 1596 aa13.27□□□□□ -0.29
LEMD1-209ENST00000625854 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
LEMD1-209ENST00000625854 AHDC1Q5TGY3 1603 aaPredicted RBP13.25□□□□□ -0.29
LEMD1-209ENST00000625854 LRRC59Q96AG4 307 aaKnown RBP13.25□□□□□ -0.29
LEMD1-209ENST00000625854 SETD1AO15047 1707 aaKnown RBP13.25□□□□□ -0.29
LEMD1-209ENST00000625854 LRP6O75581 1613 aa13.24□□□□□ -0.29
LEMD1-209ENST00000625854 NEXMIFQ5QGS0 1516 aa13.24□□□□□ -0.29
LEMD1-209ENST00000625854 FOXD1Q16676 465 aa13.24□□□□□ -0.29
LEMD1-209ENST00000625854 SHPRHQ149N8 1683 aa13.24□□□□□ -0.29
LEMD1-209ENST00000625854 DCCP43146 1447 aa13.23□□□□□ -0.29
LEMD1-209ENST00000625854 RXRBP28702 533 aa13.23□□□□□ -0.29
LEMD1-209ENST00000625854 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
LEMD1-209ENST00000625854 MST1RQ04912 1400 aa13.22□□□□□ -0.29
LEMD1-209ENST00000625854 RPGRIP1LQ68CZ1 1315 aa13.21□□□□□ -0.29
LEMD1-209ENST00000625854 RGL3Q3MIN7 710 aa13.21□□□□□ -0.29
LEMD1-209ENST00000625854 C8orf37Q96NL8 207 aa13.21□□□□□ -0.29
LEMD1-209ENST00000625854 ADGRL3Q9HAR2 1447 aa13.21□□□□□ -0.3
LEMD1-209ENST00000625854 AFF2P51816 1311 aa13.2□□□□□ -0.3
LEMD1-209ENST00000625854 ORAI2Q96SN7 254 aa13.2□□□□□ -0.3
LEMD1-209ENST00000625854 HFM1A2PYH4 1435 aa13.2□□□□□ -0.3
LEMD1-209ENST00000625854 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
LEMD1-209ENST00000625854 ADAMTS2O95450 1211 aa13.19□□□□□ -0.3
LEMD1-209ENST00000625854 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
LEMD1-209ENST00000625854 STK26Q9P289 416 aa13.19□□□□□ -0.3
LEMD1-209ENST00000625854 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
LEMD1-209ENST00000625854 NHSL1Q5SYE7 1610 aa13.18□□□□□ -0.3
LEMD1-209ENST00000625854 QTRT2Q9H974 415 aaKnown RBP13.18□□□□□ -0.3
LEMD1-209ENST00000625854 ROBO2Q9HCK4 1378 aa13.18□□□□□ -0.3
LEMD1-209ENST00000625854 C1orf167Q5SNV9 1468 aa13.16□□□□□ -0.3
LEMD1-209ENST00000625854 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
LEMD1-209ENST00000625854 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
LEMD1-209ENST00000625854 PPLO60437 1756 aa13.16□□□□□ -0.3
LEMD1-209ENST00000625854 PNPLA6Q8IY17 1366 aa13.16□□□□□ -0.3
LEMD1-209ENST00000625854 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
LEMD1-209ENST00000625854 ESCO1Q5FWF5 840 aa13.15□□□□□ -0.3
LEMD1-209ENST00000625854 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
LEMD1-209ENST00000625854 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
LEMD1-209ENST00000625854 WAPLQ7Z5K2 1190 aa13.14□□□□□ -0.31
LEMD1-209ENST00000625854 CCDC144AA2RUR9 1427 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms