RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 MRVI1Q9Y6F6 885 aa6.52□□□□□ -1.37
CHD2-204ENST00000625463 C19orf67A6NJJ6 358 aa6.51□□□□□ -1.37
CHD2-204ENST00000625463 IRF6O14896 467 aa6.51□□□□□ -1.37
CHD2-204ENST00000625463 KDM4AO75164 1064 aa6.51□□□□□ -1.37
CHD2-204ENST00000625463 PPP1R37O75864 691 aa6.51□□□□□ -1.37
CHD2-204ENST00000625463 SPTY2D1Q68D10 685 aaPredicted RBP6.51□□□□□ -1.37
CHD2-204ENST00000625463 DCAF11Q8TEB1 546 aa6.51□□□□□ -1.37
CHD2-204ENST00000625463 MKL1Q969V6 931 aa6.51□□□□□ -1.37
CHD2-204ENST00000625463 CCDC94Q9BW85 323 aaPredicted RBP6.51□□□□□ -1.37
CHD2-204ENST00000625463 CEP83Q9Y592 693 aa6.51□□□□□ -1.37
CHD2-204ENST00000625463 CCDC66A2RUB6 948 aa6.5□□□□□ -1.37
CHD2-204ENST00000625463 RBM25P49756 843 aaKnown RBP6.5□□□□□ -1.37
CHD2-204ENST00000625463 IRX5P78411 483 aaPredicted RBP6.5□□□□□ -1.37
CHD2-204ENST00000625463 NFKBIBQ15653 356 aa6.5□□□□□ -1.37
CHD2-204ENST00000625463 CTR9Q6PD62 1173 aa6.5□□□□□ -1.37
CHD2-204ENST00000625463 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.5□□□□□ -1.37
CHD2-204ENST00000625463 AEBP1Q8IUX7 1158 aa6.5□□□□□ -1.37
CHD2-204ENST00000625463 KCTD17Q8N5Z5 321 aa6.5□□□□□ -1.37
CHD2-204ENST00000625463 FBXO22Q8NEZ5 403 aa6.5□□□□□ -1.37
CHD2-204ENST00000625463 MS4A3Q96HJ5 214 aa6.5□□□□□ -1.37
CHD2-204ENST00000625463 MYCBPQ99417 103 aaPredicted RBP6.5□□□□□ -1.37
CHD2-204ENST00000625463 PAIP2Q9BPZ3 127 aaKnown RBP6.5□□□□□ -1.37
CHD2-204ENST00000625463 FEZ2Q9UHY8 353 aaPredicted RBP6.5□□□□□ -1.37
CHD2-204ENST00000625463 PHF8Q9UPP1 1060 aa6.5□□□□□ -1.37
CHD2-204ENST00000625463 CFAP65Q6ZU64 1925 aaKnown RBP6.49□□□□□ -1.37
CHD2-204ENST00000625463 MTA1Q13330 715 aa6.48□□□□□ -1.37
CHD2-204ENST00000625463 CDCA8Q53HL2 280 aa6.48□□□□□ -1.37
CHD2-204ENST00000625463 FAM210AQ96ND0 272 aa6.48□□□□□ -1.37
CHD2-204ENST00000625463 DYNC1I1O14576 645 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 ANP32CO43423 234 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 KIF1CO43896 1103 aaKnown RBP6.47□□□□□ -1.37
CHD2-204ENST00000625463 CCDC172P0C7W6 258 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 KIAA1211Q6ZU35 1233 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 ANKRD23Q86SG2 305 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 P3H3Q8IVL6 736 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 MNS1Q8NEH6 495 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 TSPAN18Q96SJ8 248 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 TMEM106CQ9BVX2 250 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 KIF3AQ9Y496 699 aa6.47□□□□□ -1.37
CHD2-204ENST00000625463 LOC102724159A0A0B4J2E5 919 aa6.46□□□□□ -1.38
CHD2-204ENST00000625463 BRPF1P55201 1214 aaPredicted RBP6.46□□□□□ -1.38
CHD2-204ENST00000625463 NLRP6P59044 892 aa6.46□□□□□ -1.38
CHD2-204ENST00000625463 MYBPC2Q14324 1141 aa6.46□□□□□ -1.38
CHD2-204ENST00000625463 PWP2Q15269 919 aaKnown RBP6.46□□□□□ -1.38
CHD2-204ENST00000625463 EVX2Q03828 476 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 ARMCX6Q7L4S7 300 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 MPNDQ8N594 471 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 MSL3Q8N5Y2 521 aaKnown RBP6.45□□□□□ -1.38
CHD2-204ENST00000625463 ITFG2Q969R8 447 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 SGSM3Q96HU1 749 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 MS4A4AQ96JQ5 239 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 TIGD1Q96MW7 591 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 NCAPGQ9BPX3 1015 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 NBPF3Q9H094 633 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 BRMS1Q9HCU9 246 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 SMC4Q9NTJ3 1288 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 CGNQ9P2M7 1197 aaKnown RBP6.45□□□□□ -1.38
CHD2-204ENST00000625463 ISY1Q9ULR0 285 aaKnown RBP6.45□□□□□ -1.38
CHD2-204ENST00000625463 MTMR7Q9Y216 660 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 NUB1Q9Y5A7 615 aa6.45□□□□□ -1.38
CHD2-204ENST00000625463 CCER2I3L3R5 266 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 KIF3CO14782 793 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 OFD1O75665 1012 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 NEFHP12036 1026 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 MFAP1P55081 439 aaKnown RBP6.44□□□□□ -1.38
CHD2-204ENST00000625463 SDR16C5Q8N3Y7 309 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 ZNF513Q8N8E2 541 aaPredicted RBP6.44□□□□□ -1.38
CHD2-204ENST00000625463 RNF217Q8TC41 542 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 ZNF428Q96B54 188 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 FAM13BQ9NYF5 915 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 CALCOCO1Q9P1Z2 691 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 RIPOR2Q9Y4F9 1068 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 UNC13AQ9UPW8 1703 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 KIF16BQ96L93 1317 aa6.44□□□□□ -1.38
CHD2-204ENST00000625463 ZNF853P0CG23 659 aa6.43□□□□□ -1.38
CHD2-204ENST00000625463 KCNJ4P48050 445 aa6.43□□□□□ -1.38
CHD2-204ENST00000625463 ZRSR2Q15696 482 aaKnown RBP6.43□□□□□ -1.38
CHD2-204ENST00000625463 FOXD4L6Q3SYB3 417 aaPredicted RBP6.43□□□□□ -1.38
CHD2-204ENST00000625463 FOXD4L3Q6VB84 417 aaPredicted RBP6.43□□□□□ -1.38
CHD2-204ENST00000625463 KNSTRNQ9Y448 316 aa6.43□□□□□ -1.38
CHD2-204ENST00000625463 NISCHQ9Y2I1 1504 aa6.43□□□□□ -1.38
CHD2-204ENST00000625463 MPHOSPH10O00566 681 aaKnown RBP6.42□□□□□ -1.38
CHD2-204ENST00000625463 GALR2O43603 387 aaPredicted RBP6.42□□□□□ -1.38
CHD2-204ENST00000625463 LIG1P18858 919 aa6.42□□□□□ -1.38
CHD2-204ENST00000625463 ERCC3P19447 782 aa6.42□□□□□ -1.38
CHD2-204ENST00000625463 RIPK4P57078 832 aa6.42□□□□□ -1.38
CHD2-204ENST00000625463 DONSONQ9NYP3 566 aa6.42□□□□□ -1.38
CHD2-204ENST00000625463 NINLQ9Y2I6 1382 aa6.42□□□□□ -1.38
CHD2-204ENST00000625463 TTLL13PA6NNM8 815 aa6.41□□□□□ -1.38
CHD2-204ENST00000625463 TRIM6-TRIM34B2RNG4 842 aa6.41□□□□□ -1.38
CHD2-204ENST00000625463 TULP2O00295 520 aa6.41□□□□□ -1.38
CHD2-204ENST00000625463 POLD1P28340 1107 aa6.41□□□□□ -1.38
CHD2-204ENST00000625463 TNNT3P45378 269 aaPredicted RBP6.41□□□□□ -1.38
CHD2-204ENST00000625463 TDO2P48775 406 aa6.41□□□□□ -1.38
CHD2-204ENST00000625463 GTF2A1P52655 376 aaPredicted RBP6.41□□□□□ -1.38
CHD2-204ENST00000625463 KCNV2Q8TDN2 545 aa6.41□□□□□ -1.38
CHD2-204ENST00000625463 TRIM34Q9BYJ4 488 aa6.41□□□□□ -1.38
CHD2-204ENST00000625463 BMP2KQ9NSY1 1161 aaPredicted RBP6.41□□□□□ -1.38
CHD2-204ENST00000625463 ZBED9Q6R2W3 1325 aa6.41□□□□□ -1.38
CHD2-204ENST00000625463 HMGB1P1B2RPK0 211 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms