RNA–Protein interactions for RNA: ENST00000623548.1

LINC00216-201, long intergenic non-protein coding RNA 216, humanhuman

BASIC

Gene LINC00216, Length 1,126 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00216-201ENST00000623548 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
LINC00216-201ENST00000623548 PTPREP23469 700 aa10.74□□□□□ -0.69
LINC00216-201ENST00000623548 HCSTQ9UBK5 93 aa10.74□□□□□ -0.69
LINC00216-201ENST00000623548 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
LINC00216-201ENST00000623548 NLRP7Q8WX94 980 aa10.72□□□□□ -0.69
LINC00216-201ENST00000623548 VPS9D1Q9Y2B5 631 aa10.71□□□□□ -0.69
LINC00216-201ENST00000623548 COL9A1P20849 921 aa10.7□□□□□ -0.7
LINC00216-201ENST00000623548 EYA1Q99502 592 aa10.7□□□□□ -0.7
LINC00216-201ENST00000623548 SLC4A5Q9BY07 1137 aa10.7□□□□□ -0.7
LINC00216-201ENST00000623548 RCCD1A6NED2 376 aa10.69□□□□□ -0.7
LINC00216-201ENST00000623548 NBPF26B4DH59 902 aa10.69□□□□□ -0.7
LINC00216-201ENST00000623548 MYSM1Q5VVJ2 828 aa10.69□□□□□ -0.7
LINC00216-201ENST00000623548 SULF1Q8IWU6 871 aa10.69□□□□□ -0.7
LINC00216-201ENST00000623548 ATP1B4Q9UN42 357 aaPredicted RBP10.69□□□□□ -0.7
LINC00216-201ENST00000623548 PACS2Q86VP3 889 aa10.68□□□□□ -0.7
LINC00216-201ENST00000623548 FAM198AQ9UFP1 575 aa10.68□□□□□ -0.7
LINC00216-201ENST00000623548 TRIM6-TRIM34B2RNG4 842 aa10.67□□□□□ -0.7
LINC00216-201ENST00000623548 DNAJB2P25686 324 aa10.67□□□□□ -0.7
LINC00216-201ENST00000623548 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
LINC00216-201ENST00000623548 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
LINC00216-201ENST00000623548 KCTD12Q96CX2 325 aaKnown RBP10.66□□□□□ -0.7
LINC00216-201ENST00000623548 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
LINC00216-201ENST00000623548 TBC1D2Q9BYX2 928 aa10.66□□□□□ -0.7
LINC00216-201ENST00000623548 POLR3EQ9NVU0 708 aa10.66□□□□□ -0.7
LINC00216-201ENST00000623548 A6NJR5 290 aa10.65□□□□□ -0.7
LINC00216-201ENST00000623548 NUDT18Q6ZVK8 323 aa10.65□□□□□ -0.7
LINC00216-201ENST00000623548 MCM6Q14566 821 aa10.64□□□□□ -0.71
LINC00216-201ENST00000623548 PROCA1Q8NCQ7 364 aaPredicted RBP10.64□□□□□ -0.71
LINC00216-201ENST00000623548 TATDN2Q93075 761 aa10.64□□□□□ -0.71
LINC00216-201ENST00000623548 ZBED2Q9BTP6 218 aa10.64□□□□□ -0.71
LINC00216-201ENST00000623548 CD46P15529 392 aa10.63□□□□□ -0.71
LINC00216-201ENST00000623548 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
LINC00216-201ENST00000623548 PNMA3Q9UL41 463 aa10.63□□□□□ -0.71
LINC00216-201ENST00000623548 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
LINC00216-201ENST00000623548 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
LINC00216-201ENST00000623548 TMEM134Q9H6X4 195 aa10.62□□□□□ -0.71
LINC00216-201ENST00000623548 SPIRE2Q8WWL2 714 aa10.61□□□□□ -0.71
LINC00216-201ENST00000623548 BHMG1C9JSJ3 638 aaPredicted RBP10.6□□□□□ -0.71
LINC00216-201ENST00000623548 NUTM1Q86Y26 1132 aa10.6□□□□□ -0.71
LINC00216-201ENST00000623548 MRPL50Q8N5N7 158 aaKnown RBP10.6□□□□□ -0.71
LINC00216-201ENST00000623548 BANK1Q8NDB2 785 aa10.6□□□□□ -0.71
LINC00216-201ENST00000623548 PLA2G2EQ9NZK7 142 aa10.6□□□□□ -0.71
LINC00216-201ENST00000623548 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
LINC00216-201ENST00000623548 SPDYE5A6NIY4 337 aa10.58□□□□□ -0.72
LINC00216-201ENST00000623548 GJA5P36382 358 aa10.58□□□□□ -0.72
LINC00216-201ENST00000623548 TMEM259Q4ZIN3 620 aa10.58□□□□□ -0.72
LINC00216-201ENST00000623548 PPP2R2DQ66LE6 453 aa10.58□□□□□ -0.72
LINC00216-201ENST00000623548 RIC3Q7Z5B4 369 aa10.58□□□□□ -0.72
LINC00216-201ENST00000623548 NBPF3Q9H094 633 aa10.58□□□□□ -0.72
LINC00216-201ENST00000623548 SPTLC1O15269 473 aa10.57□□□□□ -0.72
LINC00216-201ENST00000623548 RSPH4AQ5TD94 716 aa10.57□□□□□ -0.72
LINC00216-201ENST00000623548 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
LINC00216-201ENST00000623548 RFC5P40937 340 aa10.56□□□□□ -0.72
LINC00216-201ENST00000623548 PTPN5P54829 565 aa10.56□□□□□ -0.72
LINC00216-201ENST00000623548 CLUAP1Q96AJ1 413 aa10.56□□□□□ -0.72
LINC00216-201ENST00000623548 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
LINC00216-201ENST00000623548 RAD21O60216 631 aa10.55□□□□□ -0.72
LINC00216-201ENST00000623548 TRAK2O60296 914 aa10.55□□□□□ -0.72
LINC00216-201ENST00000623548 PROX2Q3B8N5 592 aa10.55□□□□□ -0.72
LINC00216-201ENST00000623548 WNT2BQ93097 391 aa10.55□□□□□ -0.72
LINC00216-201ENST00000623548 APBB1O00213 710 aa10.54□□□□□ -0.72
LINC00216-201ENST00000623548 RSBN1LQ6PCB5 846 aaPredicted RBP10.54□□□□□ -0.72
LINC00216-201ENST00000623548 RABGEF1Q9UJ41 708 aa10.54□□□□□ -0.72
LINC00216-201ENST00000623548 RDH13Q8NBN7 331 aa10.53□□□□□ -0.72
LINC00216-201ENST00000623548 KIAA1468Q9P260 1216 aa10.53□□□□□ -0.72
LINC00216-201ENST00000623548 SMAPO00193 183 aa10.52□□□□□ -0.73
LINC00216-201ENST00000623548 USP46P62068 366 aa10.52□□□□□ -0.73
LINC00216-201ENST00000623548 THSD4Q6ZMP0 1018 aa10.52□□□□□ -0.73
LINC00216-201ENST00000623548 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
LINC00216-201ENST00000623548 MOXD2PA6NHM9 499 aa10.51□□□□□ -0.73
LINC00216-201ENST00000623548 PROSER2Q86WR7 435 aaPredicted RBP10.51□□□□□ -0.73
LINC00216-201ENST00000623548 SOCS7O14512 581 aa10.5□□□□□ -0.73
LINC00216-201ENST00000623548 KDM4AO75164 1064 aa10.5□□□□□ -0.73
LINC00216-201ENST00000623548 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
LINC00216-201ENST00000623548 ARID3CA6NKF2 412 aa10.49□□□□□ -0.73
LINC00216-201ENST00000623548 HDGFP51858 240 aaKnown RBP10.49□□□□□ -0.73
LINC00216-201ENST00000623548 LILRB3O75022 631 aa10.48□□□□□ -0.73
LINC00216-201ENST00000623548 GCGRP47871 477 aa10.48□□□□□ -0.73
LINC00216-201ENST00000623548 PRPF38BQ5VTL8 546 aaKnown RBP10.48□□□□□ -0.73
LINC00216-201ENST00000623548 LAPTM4BQ86VI4 370 aa10.47□□□□□ -0.73
LINC00216-201ENST00000623548 FNBP4Q8N3X1 1017 aaPredicted RBP10.46□□□□□ -0.73
LINC00216-201ENST00000623548 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
LINC00216-201ENST00000623548 ARID3AQ99856 593 aa10.46□□□□□ -0.73
LINC00216-201ENST00000623548 SNRKQ9NRH2 765 aa10.46□□□□□ -0.73
LINC00216-201ENST00000623548 COG6Q9Y2V7 657 aa10.46□□□□□ -0.73
LINC00216-201ENST00000623548 NDUFV2P19404 249 aa10.45□□□□□ -0.74
LINC00216-201ENST00000623548 CSPP1Q1MSJ5 1256 aa10.45□□□□□ -0.74
LINC00216-201ENST00000623548 SWT1Q5T5J6 900 aaKnown RBP10.45□□□□□ -0.74
LINC00216-201ENST00000623548 FBXO31Q5XUX0 539 aaPredicted RBP10.45□□□□□ -0.74
LINC00216-201ENST00000623548 POM121Q96HA1 1249 aa10.45□□□□□ -0.74
LINC00216-201ENST00000623548 PRM3Q9NNZ6 103 aa10.45□□□□□ -0.74
LINC00216-201ENST00000623548 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
LINC00216-201ENST00000623548 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
LINC00216-201ENST00000623548 HOXA2O43364 376 aa10.44□□□□□ -0.74
LINC00216-201ENST00000623548 QPCTQ16769 361 aa10.44□□□□□ -0.74
LINC00216-201ENST00000623548 FAM98CQ17RN3 349 aaKnown RBP10.44□□□□□ -0.74
LINC00216-201ENST00000623548 NUTM2DQ5VT03 806 aaPredicted RBP10.44□□□□□ -0.74
LINC00216-201ENST00000623548 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
LINC00216-201ENST00000623548 ZBTB3Q9H5J0 574 aa10.44□□□□□ -0.74
LINC00216-201ENST00000623548 WWC1Q8IX03 1113 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms