RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 ARHGEF40Q8TER5 1519 aa25.59■■□□□ 1.69
PCDHB2-202ENST00000622947 CHGAP10645 457 aaKnown RBP25.57■■□□□ 1.68
PCDHB2-202ENST00000622947 TESK2Q96S53 571 aa25.57■■□□□ 1.68
PCDHB2-202ENST00000622947 IQGAP1P46940 1657 aa25.57■■□□□ 1.68
PCDHB2-202ENST00000622947 PPLO60437 1756 aa25.56■■□□□ 1.68
PCDHB2-202ENST00000622947 PREX1Q8TCU6 1659 aa25.56■■□□□ 1.68
PCDHB2-202ENST00000622947 KIAA1210Q9ULL0 1709 aa25.55■■□□□ 1.68
PCDHB2-202ENST00000622947 NRXN1Q9ULB1 1477 aa25.55■■□□□ 1.68
PCDHB2-202ENST00000622947 CFAP70Q5T0N1 1121 aa25.52■■□□□ 1.68
PCDHB2-202ENST00000622947 IDI1Q13907 227 aa25.52■■□□□ 1.68
PCDHB2-202ENST00000622947 FBXO31Q5XUX0 539 aaPredicted RBP25.52■■□□□ 1.68
PCDHB2-202ENST00000622947 PRKRIP1Q9H875 184 aaPredicted RBP25.51■■□□□ 1.67
PCDHB2-202ENST00000622947 CLTCQ00610 1675 aaKnown RBP25.51■■□□□ 1.67
PCDHB2-202ENST00000622947 DISP3Q9P2K9 1392 aa25.51■■□□□ 1.67
PCDHB2-202ENST00000622947 MLECQ14165 292 aa25.49■■□□□ 1.67
PCDHB2-202ENST00000622947 MYO5BQ9ULV0 1848 aa25.48■■□□□ 1.67
PCDHB2-202ENST00000622947 SCAF11Q99590 1463 aaKnown RBP25.48■■□□□ 1.67
PCDHB2-202ENST00000622947 CCDC184Q52MB2 194 aa25.46■■□□□ 1.67
PCDHB2-202ENST00000622947 PPP6R1Q9UPN7 881 aa25.45■■□□□ 1.67
PCDHB2-202ENST00000622947 PIK3C2GO75747 1445 aa25.45■■□□□ 1.66
PCDHB2-202ENST00000622947 ERVK-7P63135 1459 aa25.45■■□□□ 1.66
PCDHB2-202ENST00000622947 NEXMIFQ5QGS0 1516 aa25.44■■□□□ 1.66
PCDHB2-202ENST00000622947 SLC52A1Q9NWF4 448 aa25.44■■□□□ 1.66
PCDHB2-202ENST00000622947 RPGRIP1LQ68CZ1 1315 aa25.43■■□□□ 1.66
PCDHB2-202ENST00000622947 TMEM131LA2VDJ0 1609 aa25.43■■□□□ 1.66
PCDHB2-202ENST00000622947 NUTM2DQ5VT03 806 aaPredicted RBP25.42■■□□□ 1.66
PCDHB2-202ENST00000622947 C14orf93Q9H972 538 aaKnown RBP25.38■■□□□ 1.65
PCDHB2-202ENST00000622947 TMF1P82094 1093 aa25.37■■□□□ 1.65
PCDHB2-202ENST00000622947 CNGB1Q14028 1251 aaPredicted RBP25.37■■□□□ 1.65
PCDHB2-202ENST00000622947 SETBP1Q9Y6X0 1596 aa25.37■■□□□ 1.65
PCDHB2-202ENST00000622947 ADGRB1O14514 1584 aa25.36■■□□□ 1.65
PCDHB2-202ENST00000622947 SPATA31D1Q6ZQQ2 1576 aa25.36■■□□□ 1.65
PCDHB2-202ENST00000622947 TRHP20396 242 aaPredicted RBP25.36■■□□□ 1.65
PCDHB2-202ENST00000622947 TMEM132EQ6IEE7 984 aa25.32■■□□□ 1.64
PCDHB2-202ENST00000622947 VGFO15240 615 aaPredicted RBP25.32■■□□□ 1.64
PCDHB2-202ENST00000622947 EIF3AQ14152 1382 aaKnown RBP25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 PER1O15534 1290 aaPredicted RBP25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 SUPT16HQ9Y5B9 1047 aaKnown RBP25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 ZMYM3Q14202 1370 aa25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 TSHZ2Q9NRE2 1034 aa25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 ZFYVE9O95405 1425 aa25.3■■□□□ 1.64
PCDHB2-202ENST00000622947 MYO3AQ8NEV4 1616 aa25.29■■□□□ 1.64
PCDHB2-202ENST00000622947 SENP3Q9H4L4 574 aaPredicted RBP25.27■■□□□ 1.64
PCDHB2-202ENST00000622947 TRAK1Q9UPV9 953 aa25.27■■□□□ 1.64
PCDHB2-202ENST00000622947 PANK3Q9H999 370 aa25.26■■□□□ 1.63
PCDHB2-202ENST00000622947 MRS2Q9HD23 443 aa25.26■■□□□ 1.63
PCDHB2-202ENST00000622947 A2ML1A8K2U0 1454 aa25.24■■□□□ 1.63
PCDHB2-202ENST00000622947 MYOM1P52179 1685 aa25.24■■□□□ 1.63
PCDHB2-202ENST00000622947 ESF1Q9H501 851 aaKnown RBP25.22■■□□□ 1.63
PCDHB2-202ENST00000622947 ASXL1Q8IXJ9 1541 aa25.22■■□□□ 1.63
PCDHB2-202ENST00000622947 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
PCDHB2-202ENST00000622947 STAG3Q9UJ98 1225 aa25.2■■□□□ 1.62
PCDHB2-202ENST00000622947 CENPJQ9HC77 1338 aaPredicted RBP25.2■■□□□ 1.62
PCDHB2-202ENST00000622947 KDM5AP29375 1690 aaKnown RBP25.19■■□□□ 1.62
PCDHB2-202ENST00000622947 QRICH2Q9H0J4 1663 aa25.19■■□□□ 1.62
PCDHB2-202ENST00000622947 SBNO2Q9Y2G9 1366 aa25.19■■□□□ 1.62
PCDHB2-202ENST00000622947 ARHGEF28Q8N1W1 1705 aaKnown RBP25.19■■□□□ 1.62
PCDHB2-202ENST00000622947 FAM9BQ8IZU0 186 aa25.17■■□□□ 1.62
PCDHB2-202ENST00000622947 CDCA8Q53HL2 280 aa25.17■■□□□ 1.62
PCDHB2-202ENST00000622947 PARD3Q8TEW0 1356 aa25.16■■□□□ 1.62
PCDHB2-202ENST00000622947 RALBP1Q15311 655 aa25.14■■□□□ 1.62
PCDHB2-202ENST00000622947 ALKQ9UM73 1620 aa25.14■■□□□ 1.61
PCDHB2-202ENST00000622947 HNRNPUQ00839 825 aaKnown RBP eCLIP25.13■■□□□ 1.61
PCDHB2-202ENST00000622947 KTN1Q86UP2 1357 aaKnown RBP25.13■■□□□ 1.61
PCDHB2-202ENST00000622947 RIMS2Q9UQ26 1411 aa25.13■■□□□ 1.61
PCDHB2-202ENST00000622947 TNRQ92752 1358 aa25.13■■□□□ 1.61
PCDHB2-202ENST00000622947 CC2D1BQ5T0F9 858 aaKnown RBP25.12■■□□□ 1.61
PCDHB2-202ENST00000622947 MYBBP1AQ9BQG0 1328 aaKnown RBP25.12■■□□□ 1.61
PCDHB2-202ENST00000622947 CEBPAP49715 358 aaPredicted RBP25.12■■□□□ 1.61
PCDHB2-202ENST00000622947 SLC24A1O60721 1099 aa25.1■■□□□ 1.61
PCDHB2-202ENST00000622947 STK26Q9P289 416 aa25.09■■□□□ 1.61
PCDHB2-202ENST00000622947 PTPRMP28827 1452 aa25.08■■□□□ 1.61
PCDHB2-202ENST00000622947 SETD1AO15047 1707 aaKnown RBP25.08■■□□□ 1.61
PCDHB2-202ENST00000622947 C3P01024 1663 aa25.08■■□□□ 1.6
PCDHB2-202ENST00000622947 UBR1Q8IWV7 1749 aa25.07■■□□□ 1.6
PCDHB2-202ENST00000622947 AMER1Q5JTC6 1135 aaPredicted RBP25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 FER1L4A9Z1Z3 1794 aa25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 YTHDC2Q9H6S0 1430 aaKnown RBP25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 NRXN3Q9Y4C0 1643 aa25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 BRD4O60885 1362 aaPredicted RBP25.05■■□□□ 1.6
PCDHB2-202ENST00000622947 TULP4Q9NRJ4 1543 aa25.05■■□□□ 1.6
PCDHB2-202ENST00000622947 TMC1Q8TDI8 760 aa25.05■■□□□ 1.6
PCDHB2-202ENST00000622947 SAFB2Q14151 953 aaKnown RBP eCLIP25.04■■□□□ 1.6
PCDHB2-202ENST00000622947 KNSTRNQ9Y448 316 aa25.03■■□□□ 1.6
PCDHB2-202ENST00000622947 CARD14Q9BXL6 1004 aa25.02■■□□□ 1.6
PCDHB2-202ENST00000622947 NLRP13Q86W25 1043 aa25.01■■□□□ 1.59
PCDHB2-202ENST00000622947 PRAM1Q96QH2 718 aa24.98■■□□□ 1.59
PCDHB2-202ENST00000622947 SLC12A5Q9H2X9 1139 aa24.98■■□□□ 1.59
PCDHB2-202ENST00000622947 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
PCDHB2-202ENST00000622947 PLPPR3Q6T4P5 718 aa24.97■■□□□ 1.59
PCDHB2-202ENST00000622947 LRPPRCP42704 1394 aaKnown RBP24.97■■□□□ 1.59
PCDHB2-202ENST00000622947 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.96■■□□□ 1.59
PCDHB2-202ENST00000622947 NLRP1Q9C000 1473 aa24.95■■□□□ 1.59
PCDHB2-202ENST00000622947 EVC2Q86UK5 1308 aa24.95■■□□□ 1.58
PCDHB2-202ENST00000622947 METP08581 1390 aa24.95■■□□□ 1.58
PCDHB2-202ENST00000622947 CABP2Q9NPB3 220 aa24.94■■□□□ 1.58
PCDHB2-202ENST00000622947 NPC1L1Q9UHC9 1359 aa24.94■■□□□ 1.58
PCDHB2-202ENST00000622947 MINK1Q8N4C8 1332 aaPredicted RBP24.92■■□□□ 1.58
PCDHB2-202ENST00000622947 ZBED9Q6R2W3 1325 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms