RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 ARHGEF40Q8TER5 1519 aa25.59■■□□□ 1.69
PCDHB2-202ENST00000622947 CHGAP10645 457 aaKnown RBP25.57■■□□□ 1.68
PCDHB2-202ENST00000622947 TESK2Q96S53 571 aa25.57■■□□□ 1.68
PCDHB2-202ENST00000622947 IQGAP1P46940 1657 aa25.57■■□□□ 1.68
PCDHB2-202ENST00000622947 PPLO60437 1756 aa25.56■■□□□ 1.68
PCDHB2-202ENST00000622947 PREX1Q8TCU6 1659 aa25.56■■□□□ 1.68
PCDHB2-202ENST00000622947 KIAA1210Q9ULL0 1709 aa25.55■■□□□ 1.68
PCDHB2-202ENST00000622947 NRXN1Q9ULB1 1477 aa25.55■■□□□ 1.68
PCDHB2-202ENST00000622947 CFAP70Q5T0N1 1121 aa25.52■■□□□ 1.68
PCDHB2-202ENST00000622947 IDI1Q13907 227 aa25.52■■□□□ 1.68
PCDHB2-202ENST00000622947 FBXO31Q5XUX0 539 aaPredicted RBP25.52■■□□□ 1.68
PCDHB2-202ENST00000622947 PRKRIP1Q9H875 184 aaPredicted RBP25.51■■□□□ 1.67
PCDHB2-202ENST00000622947 CLTCQ00610 1675 aaKnown RBP25.51■■□□□ 1.67
PCDHB2-202ENST00000622947 DISP3Q9P2K9 1392 aa25.51■■□□□ 1.67
PCDHB2-202ENST00000622947 MLECQ14165 292 aa25.49■■□□□ 1.67
PCDHB2-202ENST00000622947 MYO5BQ9ULV0 1848 aa25.48■■□□□ 1.67
PCDHB2-202ENST00000622947 SCAF11Q99590 1463 aaKnown RBP25.48■■□□□ 1.67
PCDHB2-202ENST00000622947 CCDC184Q52MB2 194 aa25.46■■□□□ 1.67
PCDHB2-202ENST00000622947 PPP6R1Q9UPN7 881 aa25.45■■□□□ 1.67
PCDHB2-202ENST00000622947 PIK3C2GO75747 1445 aa25.45■■□□□ 1.66
PCDHB2-202ENST00000622947 ERVK-7P63135 1459 aa25.45■■□□□ 1.66
PCDHB2-202ENST00000622947 NEXMIFQ5QGS0 1516 aa25.44■■□□□ 1.66
PCDHB2-202ENST00000622947 SLC52A1Q9NWF4 448 aa25.44■■□□□ 1.66
PCDHB2-202ENST00000622947 RPGRIP1LQ68CZ1 1315 aa25.43■■□□□ 1.66
PCDHB2-202ENST00000622947 TMEM131LA2VDJ0 1609 aa25.43■■□□□ 1.66
PCDHB2-202ENST00000622947 NUTM2DQ5VT03 806 aaPredicted RBP25.42■■□□□ 1.66
PCDHB2-202ENST00000622947 C14orf93Q9H972 538 aaKnown RBP25.38■■□□□ 1.65
PCDHB2-202ENST00000622947 TMF1P82094 1093 aa25.37■■□□□ 1.65
PCDHB2-202ENST00000622947 CNGB1Q14028 1251 aaPredicted RBP25.37■■□□□ 1.65
PCDHB2-202ENST00000622947 SETBP1Q9Y6X0 1596 aa25.37■■□□□ 1.65
PCDHB2-202ENST00000622947 ADGRB1O14514 1584 aa25.36■■□□□ 1.65
PCDHB2-202ENST00000622947 SPATA31D1Q6ZQQ2 1576 aa25.36■■□□□ 1.65
PCDHB2-202ENST00000622947 TRHP20396 242 aaPredicted RBP25.36■■□□□ 1.65
PCDHB2-202ENST00000622947 TMEM132EQ6IEE7 984 aa25.32■■□□□ 1.64
PCDHB2-202ENST00000622947 VGFO15240 615 aaPredicted RBP25.32■■□□□ 1.64
PCDHB2-202ENST00000622947 EIF3AQ14152 1382 aaKnown RBP25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 PER1O15534 1290 aaPredicted RBP25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 SUPT16HQ9Y5B9 1047 aaKnown RBP25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 ZMYM3Q14202 1370 aa25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 TSHZ2Q9NRE2 1034 aa25.31■■□□□ 1.64
PCDHB2-202ENST00000622947 ZFYVE9O95405 1425 aa25.3■■□□□ 1.64
PCDHB2-202ENST00000622947 MYO3AQ8NEV4 1616 aa25.29■■□□□ 1.64
PCDHB2-202ENST00000622947 SENP3Q9H4L4 574 aaPredicted RBP25.27■■□□□ 1.64
PCDHB2-202ENST00000622947 TRAK1Q9UPV9 953 aa25.27■■□□□ 1.64
PCDHB2-202ENST00000622947 PANK3Q9H999 370 aa25.26■■□□□ 1.63
PCDHB2-202ENST00000622947 MRS2Q9HD23 443 aa25.26■■□□□ 1.63
PCDHB2-202ENST00000622947 A2ML1A8K2U0 1454 aa25.24■■□□□ 1.63
PCDHB2-202ENST00000622947 MYOM1P52179 1685 aa25.24■■□□□ 1.63
PCDHB2-202ENST00000622947 ESF1Q9H501 851 aaKnown RBP25.22■■□□□ 1.63
PCDHB2-202ENST00000622947 ASXL1Q8IXJ9 1541 aa25.22■■□□□ 1.63
PCDHB2-202ENST00000622947 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
PCDHB2-202ENST00000622947 STAG3Q9UJ98 1225 aa25.2■■□□□ 1.62
PCDHB2-202ENST00000622947 CENPJQ9HC77 1338 aaPredicted RBP25.2■■□□□ 1.62
PCDHB2-202ENST00000622947 KDM5AP29375 1690 aaKnown RBP25.19■■□□□ 1.62
PCDHB2-202ENST00000622947 QRICH2Q9H0J4 1663 aa25.19■■□□□ 1.62
PCDHB2-202ENST00000622947 SBNO2Q9Y2G9 1366 aa25.19■■□□□ 1.62
PCDHB2-202ENST00000622947 ARHGEF28Q8N1W1 1705 aaKnown RBP25.19■■□□□ 1.62
PCDHB2-202ENST00000622947 FAM9BQ8IZU0 186 aa25.17■■□□□ 1.62
PCDHB2-202ENST00000622947 CDCA8Q53HL2 280 aa25.17■■□□□ 1.62
PCDHB2-202ENST00000622947 PARD3Q8TEW0 1356 aa25.16■■□□□ 1.62
PCDHB2-202ENST00000622947 RALBP1Q15311 655 aa25.14■■□□□ 1.62
PCDHB2-202ENST00000622947 ALKQ9UM73 1620 aa25.14■■□□□ 1.61
PCDHB2-202ENST00000622947 HNRNPUQ00839 825 aaKnown RBP eCLIP25.13■■□□□ 1.61
PCDHB2-202ENST00000622947 KTN1Q86UP2 1357 aaKnown RBP25.13■■□□□ 1.61
PCDHB2-202ENST00000622947 RIMS2Q9UQ26 1411 aa25.13■■□□□ 1.61
PCDHB2-202ENST00000622947 TNRQ92752 1358 aa25.13■■□□□ 1.61
PCDHB2-202ENST00000622947 CC2D1BQ5T0F9 858 aaKnown RBP25.12■■□□□ 1.61
PCDHB2-202ENST00000622947 MYBBP1AQ9BQG0 1328 aaKnown RBP25.12■■□□□ 1.61
PCDHB2-202ENST00000622947 CEBPAP49715 358 aaPredicted RBP25.12■■□□□ 1.61
PCDHB2-202ENST00000622947 SLC24A1O60721 1099 aa25.1■■□□□ 1.61
PCDHB2-202ENST00000622947 STK26Q9P289 416 aa25.09■■□□□ 1.61
PCDHB2-202ENST00000622947 PTPRMP28827 1452 aa25.08■■□□□ 1.61
PCDHB2-202ENST00000622947 SETD1AO15047 1707 aaKnown RBP25.08■■□□□ 1.61
PCDHB2-202ENST00000622947 C3P01024 1663 aa25.08■■□□□ 1.6
PCDHB2-202ENST00000622947 UBR1Q8IWV7 1749 aa25.07■■□□□ 1.6
PCDHB2-202ENST00000622947 AMER1Q5JTC6 1135 aaPredicted RBP25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 FER1L4A9Z1Z3 1794 aa25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 YTHDC2Q9H6S0 1430 aaKnown RBP25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 NRXN3Q9Y4C0 1643 aa25.06■■□□□ 1.6
PCDHB2-202ENST00000622947 BRD4O60885 1362 aaPredicted RBP25.05■■□□□ 1.6
PCDHB2-202ENST00000622947 TULP4Q9NRJ4 1543 aa25.05■■□□□ 1.6
PCDHB2-202ENST00000622947 TMC1Q8TDI8 760 aa25.05■■□□□ 1.6
PCDHB2-202ENST00000622947 SAFB2Q14151 953 aaKnown RBP eCLIP25.04■■□□□ 1.6
PCDHB2-202ENST00000622947 KNSTRNQ9Y448 316 aa25.03■■□□□ 1.6
PCDHB2-202ENST00000622947 CARD14Q9BXL6 1004 aa25.02■■□□□ 1.6
PCDHB2-202ENST00000622947 NLRP13Q86W25 1043 aa25.01■■□□□ 1.59
PCDHB2-202ENST00000622947 PRAM1Q96QH2 718 aa24.98■■□□□ 1.59
PCDHB2-202ENST00000622947 SLC12A5Q9H2X9 1139 aa24.98■■□□□ 1.59
PCDHB2-202ENST00000622947 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
PCDHB2-202ENST00000622947 PLPPR3Q6T4P5 718 aa24.97■■□□□ 1.59
PCDHB2-202ENST00000622947 LRPPRCP42704 1394 aaKnown RBP24.97■■□□□ 1.59
PCDHB2-202ENST00000622947 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.96■■□□□ 1.59
PCDHB2-202ENST00000622947 NLRP1Q9C000 1473 aa24.95■■□□□ 1.59
PCDHB2-202ENST00000622947 EVC2Q86UK5 1308 aa24.95■■□□□ 1.58
PCDHB2-202ENST00000622947 METP08581 1390 aa24.95■■□□□ 1.58
PCDHB2-202ENST00000622947 CABP2Q9NPB3 220 aa24.94■■□□□ 1.58
PCDHB2-202ENST00000622947 NPC1L1Q9UHC9 1359 aa24.94■■□□□ 1.58
PCDHB2-202ENST00000622947 MINK1Q8N4C8 1332 aaPredicted RBP24.92■■□□□ 1.58
PCDHB2-202ENST00000622947 ZBED9Q6R2W3 1325 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms