RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 TNIKQ9UKE5 1360 aa8.73□□□□□ -1.01
SRSF4-207ENST00000622143 ARHGAP33O14559 1287 aa8.72□□□□□ -1.01
SRSF4-207ENST00000622143 ZNF454Q8N9F8 522 aa8.72□□□□□ -1.01
SRSF4-207ENST00000622143 ZCCHC11Q5TAX3 1644 aaKnown RBP8.72□□□□□ -1.01
SRSF4-207ENST00000622143 E2F4Q16254 413 aa8.71□□□□□ -1.02
SRSF4-207ENST00000622143 UACAQ9BZF9 1416 aa8.71□□□□□ -1.02
SRSF4-207ENST00000622143 PSEN2P49810 448 aa8.7□□□□□ -1.02
SRSF4-207ENST00000622143 DMRTA1Q5VZB9 504 aa8.7□□□□□ -1.02
SRSF4-207ENST00000622143 ANKRD13DQ6ZTN6 518 aa8.7□□□□□ -1.02
SRSF4-207ENST00000622143 BCL2L12Q9HB09 334 aa8.7□□□□□ -1.02
SRSF4-207ENST00000622143 ARIH1Q9Y4X5 557 aaPredicted RBP8.7□□□□□ -1.02
SRSF4-207ENST00000622143 CARMIL2Q6F5E8 1435 aa8.7□□□□□ -1.02
SRSF4-207ENST00000622143 NBR1Q14596 966 aa8.69□□□□□ -1.02
SRSF4-207ENST00000622143 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
SRSF4-207ENST00000622143 PTPRMP28827 1452 aa8.69□□□□□ -1.02
SRSF4-207ENST00000622143 SOCS7O14512 581 aa8.68□□□□□ -1.02
SRSF4-207ENST00000622143 HSPA2P54652 639 aa8.68□□□□□ -1.02
SRSF4-207ENST00000622143 PDIA6Q15084 440 aa8.68□□□□□ -1.02
SRSF4-207ENST00000622143 PCDHGA10Q9Y5H3 936 aa8.68□□□□□ -1.02
SRSF4-207ENST00000622143 IGF1RP08069 1367 aa8.68□□□□□ -1.02
SRSF4-207ENST00000622143 UHRF1BP1LA0JNW5 1464 aa8.67□□□□□ -1.02
SRSF4-207ENST00000622143 IQGAP2Q13576 1575 aa8.67□□□□□ -1.02
SRSF4-207ENST00000622143 ADAM33Q9BZ11 813 aa8.67□□□□□ -1.02
SRSF4-207ENST00000622143 PCF11O94913 1555 aaKnown RBP8.66□□□□□ -1.02
SRSF4-207ENST00000622143 KDM5BQ9UGL1 1544 aa8.66□□□□□ -1.02
SRSF4-207ENST00000622143 PTGER2P43116 358 aa8.66□□□□□ -1.02
SRSF4-207ENST00000622143 ADGRD1Q6QNK2 874 aa8.66□□□□□ -1.02
SRSF4-207ENST00000622143 ZDHHC16Q969W1 377 aa8.66□□□□□ -1.02
SRSF4-207ENST00000622143 KCNK17Q96T54 332 aa8.66□□□□□ -1.02
SRSF4-207ENST00000622143 DISP1Q96F81 1524 aa8.65□□□□□ -1.02
SRSF4-207ENST00000622143 WDR7Q9Y4E6 1490 aa8.65□□□□□ -1.02
SRSF4-207ENST00000622143 CD109Q6YHK3 1445 aa8.65□□□□□ -1.02
SRSF4-207ENST00000622143 ARID3CA6NKF2 412 aa8.65□□□□□ -1.02
SRSF4-207ENST00000622143 TK2O00142 265 aa8.65□□□□□ -1.02
SRSF4-207ENST00000622143 PHF14O94880 888 aa8.65□□□□□ -1.02
SRSF4-207ENST00000622143 MADDQ8WXG6 1647 aa8.65□□□□□ -1.03
SRSF4-207ENST00000622143 HRO43593 1189 aa8.64□□□□□ -1.03
SRSF4-207ENST00000622143 ADAMTSL3P82987 1691 aa8.63□□□□□ -1.03
SRSF4-207ENST00000622143 ARID4BQ4LE39 1312 aaPredicted RBP8.63□□□□□ -1.03
SRSF4-207ENST00000622143 CERKQ8TCT0 537 aa8.63□□□□□ -1.03
SRSF4-207ENST00000622143 KIF27Q86VH2 1401 aa8.63□□□□□ -1.03
SRSF4-207ENST00000622143 CARMIL1Q5VZK9 1371 aa8.62□□□□□ -1.03
SRSF4-207ENST00000622143 ARHGEF1Q92888 912 aaKnown RBP8.62□□□□□ -1.03
SRSF4-207ENST00000622143 RIMS1Q86UR5 1692 aaKnown RBP8.62□□□□□ -1.03
SRSF4-207ENST00000622143 CFAP43Q8NDM7 1665 aa8.62□□□□□ -1.03
SRSF4-207ENST00000622143 SPATA31D1Q6ZQQ2 1576 aa8.61□□□□□ -1.03
SRSF4-207ENST00000622143 SPDYE16A6NNV3 312 aaPredicted RBP8.61□□□□□ -1.03
SRSF4-207ENST00000622143 PTPREP23469 700 aa8.61□□□□□ -1.03
SRSF4-207ENST00000622143 TYW1BQ6NUM6 668 aa8.61□□□□□ -1.03
SRSF4-207ENST00000622143 FBXW7Q969H0 707 aa8.61□□□□□ -1.03
SRSF4-207ENST00000622143 SLC4A5Q9BY07 1137 aa8.61□□□□□ -1.03
SRSF4-207ENST00000622143 KIAA0556O60303 1618 aa8.61□□□□□ -1.03
SRSF4-207ENST00000622143 MAGI3Q5TCQ9 1506 aa8.6□□□□□ -1.03
SRSF4-207ENST00000622143 RAPGEF3O95398 923 aa8.6□□□□□ -1.03
SRSF4-207ENST00000622143 EPAS1Q99814 870 aa8.6□□□□□ -1.03
SRSF4-207ENST00000622143 ZBED2Q9BTP6 218 aa8.6□□□□□ -1.03
SRSF4-207ENST00000622143 VPS9D1Q9Y2B5 631 aa8.6□□□□□ -1.03
SRSF4-207ENST00000622143 DDX12PQ92771 950 aa8.59□□□□□ -1.03
SRSF4-207ENST00000622143 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
SRSF4-207ENST00000622143 BCORL1Q5H9F3 1711 aa8.59□□□□□ -1.03
SRSF4-207ENST00000622143 COL9A1P20849 921 aa8.58□□□□□ -1.04
SRSF4-207ENST00000622143 PRIM1P49642 420 aaKnown RBP8.58□□□□□ -1.04
SRSF4-207ENST00000622143 PPP1R3GB7ZBB8 358 aa8.56□□□□□ -1.04
SRSF4-207ENST00000622143 UGGT2Q9NYU1 1516 aa8.55□□□□□ -1.04
SRSF4-207ENST00000622143 BHMG1C9JSJ3 638 aaPredicted RBP8.55□□□□□ -1.04
SRSF4-207ENST00000622143 EN1Q05925 392 aaPredicted RBP8.55□□□□□ -1.04
SRSF4-207ENST00000622143 MLECQ14165 292 aa8.55□□□□□ -1.04
SRSF4-207ENST00000622143 C6orf132Q5T0Z8 1188 aa8.55□□□□□ -1.04
SRSF4-207ENST00000622143 ARAP3Q8WWN8 1544 aa8.54□□□□□ -1.04
SRSF4-207ENST00000622143 FRMPD1Q5SYB0 1578 aa8.54□□□□□ -1.04
SRSF4-207ENST00000622143 SEMA3EO15041 775 aa8.54□□□□□ -1.04
SRSF4-207ENST00000622143 ABCA8O94911 1581 aa8.52□□□□□ -1.04
SRSF4-207ENST00000622143 OSBPP22059 807 aa8.52□□□□□ -1.05
SRSF4-207ENST00000622143 TSR1Q2NL82 804 aaKnown RBP8.52□□□□□ -1.05
SRSF4-207ENST00000622143 RBM33Q96EV2 1170 aaKnown RBP8.52□□□□□ -1.05
SRSF4-207ENST00000622143 PROX2Q3B8N5 592 aa8.51□□□□□ -1.05
SRSF4-207ENST00000622143 SIGLEC1Q9BZZ2 1709 aa8.51□□□□□ -1.05
SRSF4-207ENST00000622143 ARHGEF40Q8TER5 1519 aa8.5□□□□□ -1.05
SRSF4-207ENST00000622143 TESPA1A2RU30 521 aaPredicted RBP8.5□□□□□ -1.05
SRSF4-207ENST00000622143 GRXCR2A6NFK2 248 aa8.5□□□□□ -1.05
SRSF4-207ENST00000622143 RAPGEF2Q9Y4G8 1499 aa8.5□□□□□ -1.05
SRSF4-207ENST00000622143 ABCA9Q8IUA7 1624 aa8.48□□□□□ -1.05
SRSF4-207ENST00000622143 MAP3K7O43318 606 aa8.48□□□□□ -1.05
SRSF4-207ENST00000622143 MLLT3P42568 568 aaPredicted RBP8.48□□□□□ -1.05
SRSF4-207ENST00000622143 CEBPAP49715 358 aaPredicted RBP8.48□□□□□ -1.05
SRSF4-207ENST00000622143 HCSTQ9UBK5 93 aa8.48□□□□□ -1.05
SRSF4-207ENST00000622143 RABGEF1Q9UJ41 708 aa8.48□□□□□ -1.05
SRSF4-207ENST00000622143 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
SRSF4-207ENST00000622143 FER1L4A9Z1Z3 1794 aa8.47□□□□□ -1.05
SRSF4-207ENST00000622143 ATP10BO94823 1461 aa8.46□□□□□ -1.05
SRSF4-207ENST00000622143 TULP1O00294 542 aaPredicted RBP8.46□□□□□ -1.06
SRSF4-207ENST00000622143 ONECUT3O60422 494 aaPredicted RBP8.46□□□□□ -1.06
SRSF4-207ENST00000622143 TPRNQ4KMQ1 711 aa8.46□□□□□ -1.06
SRSF4-207ENST00000622143 CDHR5Q9HBB8 845 aa8.46□□□□□ -1.06
SRSF4-207ENST00000622143 YEATS2Q9ULM3 1422 aa8.46□□□□□ -1.06
SRSF4-207ENST00000622143 NEO1Q92859 1461 aa8.45□□□□□ -1.06
SRSF4-207ENST00000622143 TRIM6-TRIM34B2RNG4 842 aa8.45□□□□□ -1.06
SRSF4-207ENST00000622143 LMOD2Q6P5Q4 547 aa8.45□□□□□ -1.06
SRSF4-207ENST00000622143 STRCQ7RTU9 1775 aa8.45□□□□□ -1.06
SRSF4-207ENST00000622143 PRKCSHP14314 528 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms