RNA–Protein interactions for RNA: ENST00000621218.4

PLP1-223, Transcript of proteolipid protein 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene PLP1, Length 3,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLP1-223	ENST00000621218	PLB1	Q6P1J6	1458 aa		11.82	□□□□□ -0.52
PLP1-223	ENST00000621218	PNN	Q9H307	717 aa	Known RBP	11.82	□□□□□ -0.52
PLP1-223	ENST00000621218	APAF1	O14727	1248 aa		11.82	□□□□□ -0.52
PLP1-223	ENST00000621218	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.82	□□□□□ -0.52
PLP1-223	ENST00000621218	WDR7	Q9Y4E6	1490 aa		11.82	□□□□□ -0.52
PLP1-223	ENST00000621218	PANK1	Q8TE04	598 aa		11.81	□□□□□ -0.52
PLP1-223	ENST00000621218	ADCY10	Q96PN6	1610 aa		11.81	□□□□□ -0.52
PLP1-223	ENST00000621218	PLA2R1	Q13018	1463 aa		11.81	□□□□□ -0.52
PLP1-223	ENST00000621218	CCDC144A	A2RUR9	1427 aa		11.81	□□□□□ -0.52
PLP1-223	ENST00000621218	COG6	Q9Y2V7	657 aa		11.81	□□□□□ -0.52
PLP1-223	ENST00000621218	FAM135A	Q9P2D6	1515 aa		11.81	□□□□□ -0.52
PLP1-223	ENST00000621218	CLUAP1	Q96AJ1	413 aa		11.81	□□□□□ -0.52
PLP1-223	ENST00000621218	TBC1D32	Q96NH3	1257 aa		11.81	□□□□□ -0.52
PLP1-223	ENST00000621218	CLASP1	Q7Z460	1538 aa		11.81	□□□□□ -0.52
PLP1-223	ENST00000621218	MAPK8IP3	Q9UPT6	1336 aa		11.8	□□□□□ -0.52
PLP1-223	ENST00000621218	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
PLP1-223	ENST00000621218	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.8	□□□□□ -0.52
PLP1-223	ENST00000621218	KNSTRN	Q9Y448	316 aa		11.8	□□□□□ -0.52
PLP1-223	ENST00000621218	MCM4	P33991	863 aa		11.8	□□□□□ -0.52
PLP1-223	ENST00000621218	GLIPR1L2	Q4G1C9	344 aa		11.8	□□□□□ -0.52
PLP1-223	ENST00000621218	SHANK2	Q9UPX8	1470 aa		11.8	□□□□□ -0.52
PLP1-223	ENST00000621218	TSPY4	P0CV99	314 aa		11.79	□□□□□ -0.52
PLP1-223	ENST00000621218	TSPY10	P0CW01	314 aa		11.79	□□□□□ -0.52
PLP1-223	ENST00000621218	LAMC1	P11047	1609 aa		11.79	□□□□□ -0.52
PLP1-223	ENST00000621218	ABCC10	Q5T3U5	1492 aa		11.79	□□□□□ -0.52
PLP1-223	ENST00000621218	CGNL1	Q0VF96	1302 aa		11.78	□□□□□ -0.52
PLP1-223	ENST00000621218	ERBB4	Q15303	1308 aa		11.78	□□□□□ -0.52
PLP1-223	ENST00000621218	HSP90AA1	P07900	732 aa	Known RBP	11.78	□□□□□ -0.52
PLP1-223	ENST00000621218	MYO5C	Q9NQX4	1742 aa		11.78	□□□□□ -0.52
PLP1-223	ENST00000621218	PDE3A	Q14432	1141 aa		11.77	□□□□□ -0.52
PLP1-223	ENST00000621218	PCDHB15	Q9Y5E8	787 aa		11.77	□□□□□ -0.52
PLP1-223	ENST00000621218	RRP9	O43818	475 aa	Known RBP	11.77	□□□□□ -0.53
PLP1-223	ENST00000621218		E9PSI1	815 aa		11.76	□□□□□ -0.53
PLP1-223	ENST00000621218	TNN	Q9UQP3	1299 aa		11.76	□□□□□ -0.53
PLP1-223	ENST00000621218	TRAK2	O60296	914 aa		11.76	□□□□□ -0.53
PLP1-223	ENST00000621218	PIK3C2G	O75747	1445 aa		11.74	□□□□□ -0.53
PLP1-223	ENST00000621218	RLBP1	P12271	317 aa		11.74	□□□□□ -0.53
PLP1-223	ENST00000621218	PDZRN3	Q9UPQ7	1066 aa		11.74	□□□□□ -0.53
PLP1-223	ENST00000621218	SLC24A1	O60721	1099 aa		11.74	□□□□□ -0.53
PLP1-223	ENST00000621218	UPF2	Q9HAU5	1272 aa	Known RBP	11.74	□□□□□ -0.53
PLP1-223	ENST00000621218	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.74	□□□□□ -0.53
PLP1-223	ENST00000621218	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
PLP1-223	ENST00000621218	MRE11	P49959	708 aa		11.73	□□□□□ -0.53
PLP1-223	ENST00000621218	ABCC2	Q92887	1545 aa		11.73	□□□□□ -0.53
PLP1-223	ENST00000621218	ESPN	B1AK53	854 aa		11.73	□□□□□ -0.53
PLP1-223	ENST00000621218	CANX	P27824	592 aa	Known RBP	11.73	□□□□□ -0.53
PLP1-223	ENST00000621218	GRPEL1	Q9HAV7	217 aa		11.73	□□□□□ -0.53
PLP1-223	ENST00000621218	CCDC141	Q6ZP82	1450 aa		11.72	□□□□□ -0.53
PLP1-223	ENST00000621218	ASXL1	Q8IXJ9	1541 aa		11.72	□□□□□ -0.53
PLP1-223	ENST00000621218	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.72	□□□□□ -0.53
PLP1-223	ENST00000621218	SYNJ2	O15056	1496 aa		11.72	□□□□□ -0.53
PLP1-223	ENST00000621218	MYH16	Q9H6N6	1097 aa		11.72	□□□□□ -0.53
PLP1-223	ENST00000621218	ERCC6	Q03468	1493 aa		11.71	□□□□□ -0.53
PLP1-223	ENST00000621218	WWC1	Q8IX03	1113 aa		11.71	□□□□□ -0.53
PLP1-223	ENST00000621218	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.71	□□□□□ -0.53
PLP1-223	ENST00000621218	ZNF692	Q9BU19	519 aa	Predicted RBP	11.71	□□□□□ -0.54
PLP1-223	ENST00000621218	CHMP5	Q9NZZ3	219 aa		11.71	□□□□□ -0.54
PLP1-223	ENST00000621218	RNF17	Q9BXT8	1623 aa	Known RBP	11.71	□□□□□ -0.54
PLP1-223	ENST00000621218	PLEKHD1	A6NEE1	506 aa		11.7	□□□□□ -0.54
PLP1-223	ENST00000621218	GAS2L3	Q86XJ1	694 aa		11.7	□□□□□ -0.54
PLP1-223	ENST00000621218	PMFBP1	Q8TBY8	1022 aa		11.7	□□□□□ -0.54
PLP1-223	ENST00000621218	RARS	P54136	660 aa	Known RBP	11.7	□□□□□ -0.54
PLP1-223	ENST00000621218	BCL2L13	Q9BXK5	485 aa		11.7	□□□□□ -0.54
PLP1-223	ENST00000621218	SYNM	O15061	1565 aa		11.69	□□□□□ -0.54
PLP1-223	ENST00000621218	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.69	□□□□□ -0.54
PLP1-223	ENST00000621218	MYOM1	P52179	1685 aa		11.69	□□□□□ -0.54
PLP1-223	ENST00000621218	NUP160	Q12769	1436 aa		11.69	□□□□□ -0.54
PLP1-223	ENST00000621218	PLXNC1	O60486	1568 aa		11.69	□□□□□ -0.54
PLP1-223	ENST00000621218	C22orf23	Q9BZE7	217 aa		11.69	□□□□□ -0.54
PLP1-223	ENST00000621218	ARHGEF5	Q12774	1597 aa		11.69	□□□□□ -0.54
PLP1-223	ENST00000621218	NINL	Q9Y2I6	1382 aa		11.69	□□□□□ -0.54
PLP1-223	ENST00000621218	MFAP1	P55081	439 aa	Known RBP	11.68	□□□□□ -0.54
PLP1-223	ENST00000621218	GRIN2A	Q12879	1464 aa		11.68	□□□□□ -0.54
PLP1-223	ENST00000621218	NEUROD2	Q15784	382 aa		11.68	□□□□□ -0.54
PLP1-223	ENST00000621218	IFT140	Q96RY7	1462 aa		11.68	□□□□□ -0.54
PLP1-223	ENST00000621218	ZMYM3	Q14202	1370 aa		11.67	□□□□□ -0.54
PLP1-223	ENST00000621218	ATP10B	O94823	1461 aa		11.67	□□□□□ -0.54
PLP1-223	ENST00000621218	IQGAP1	P46940	1657 aa		11.67	□□□□□ -0.54
PLP1-223	ENST00000621218	RRP7A	Q9Y3A4	280 aa	Known RBP	11.67	□□□□□ -0.54
PLP1-223	ENST00000621218	DDIT3	P35638	169 aa		11.66	□□□□□ -0.54
PLP1-223	ENST00000621218	NPC1L1	Q9UHC9	1359 aa		11.66	□□□□□ -0.54
PLP1-223	ENST00000621218	UNC13B	O14795	1591 aa		11.66	□□□□□ -0.54
PLP1-223	ENST00000621218	SAMD9L	Q8IVG5	1584 aa		11.66	□□□□□ -0.54
PLP1-223	ENST00000621218	ABCA8	O94911	1581 aa		11.66	□□□□□ -0.54
PLP1-223	ENST00000621218	CARD14	Q9BXL6	1004 aa		11.65	□□□□□ -0.54
PLP1-223	ENST00000621218	RWDD1	Q9H446	243 aa	Predicted RBP	11.65	□□□□□ -0.55
PLP1-223	ENST00000621218	DDX11L8	A8MPP1	907 aa		11.64	□□□□□ -0.55
PLP1-223	ENST00000621218	TNPO1	Q92973	898 aa	Known RBP	11.64	□□□□□ -0.55
PLP1-223	ENST00000621218	CDC42BPB	Q9Y5S2	1711 aa		11.64	□□□□□ -0.55
PLP1-223	ENST00000621218	MADD	Q8WXG6	1647 aa		11.63	□□□□□ -0.55
PLP1-223	ENST00000621218	TRIM44	Q96DX7	344 aa	Predicted RBP	11.63	□□□□□ -0.55
PLP1-223	ENST00000621218	IQGAP3	Q86VI3	1631 aa		11.63	□□□□□ -0.55
PLP1-223	ENST00000621218	NCOA3	Q9Y6Q9	1424 aa		11.63	□□□□□ -0.55
PLP1-223	ENST00000621218	CDCA8	Q53HL2	280 aa		11.63	□□□□□ -0.55
PLP1-223	ENST00000621218	ATP10A	O60312	1499 aa		11.63	□□□□□ -0.55
PLP1-223	ENST00000621218	NGEF	Q8N5V2	710 aa		11.62	□□□□□ -0.55
PLP1-223	ENST00000621218	AAMP	Q13685	434 aa		11.62	□□□□□ -0.55
PLP1-223	ENST00000621218	ISY1	Q9ULR0	285 aa	Known RBP	11.62	□□□□□ -0.55
PLP1-223	ENST00000621218	KIAA1211	Q6ZU35	1233 aa		11.61	□□□□□ -0.55
PLP1-223	ENST00000621218	HSCB	Q8IWL3	235 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms