RNA–Protein interactions for RNA: ENST00000621013.4

SLC39A1-211, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-211ENST00000621013 TRAPPC8Q9Y2L5 1435 aa23.03■■□□□ 1.28
SLC39A1-211ENST00000621013 ZCCHC11Q5TAX3 1644 aaKnown RBP23.02■■□□□ 1.27
SLC39A1-211ENST00000621013 NPC1L1Q9UHC9 1359 aa23.01■■□□□ 1.27
SLC39A1-211ENST00000621013 UHRF1BP1LA0JNW5 1464 aa23.01■■□□□ 1.27
SLC39A1-211ENST00000621013 PIK3C2GO75747 1445 aa23.01■■□□□ 1.27
SLC39A1-211ENST00000621013 ZNF521Q96K83 1311 aa23.01■■□□□ 1.27
SLC39A1-211ENST00000621013 ASXL1Q8IXJ9 1541 aa23■■□□□ 1.27
SLC39A1-211ENST00000621013 PLEKHH1Q9ULM0 1364 aa22.99■■□□□ 1.27
SLC39A1-211ENST00000621013 NPM2Q86SE8 214 aaKnown RBP22.99■■□□□ 1.27
SLC39A1-211ENST00000621013 ARAP3Q8WWN8 1544 aa22.99■■□□□ 1.27
SLC39A1-211ENST00000621013 DEPDC5O75140 1603 aa22.99■■□□□ 1.27
SLC39A1-211ENST00000621013 WDR43Q15061 677 aaKnown RBP eCLIP22.98■■□□□ 1.27
SLC39A1-211ENST00000621013 DUSP27Q5VZP5 1158 aa22.98■■□□□ 1.27
SLC39A1-211ENST00000621013 NEURL4Q96JN8 1562 aa22.97■■□□□ 1.27
SLC39A1-211ENST00000621013 CLTCL1P53675 1640 aa22.97■■□□□ 1.27
SLC39A1-211ENST00000621013 KDM2BQ8NHM5 1336 aa22.97■■□□□ 1.27
SLC39A1-211ENST00000621013 ZFYVE16Q7Z3T8 1539 aa22.97■■□□□ 1.27
SLC39A1-211ENST00000621013 KIAA1210Q9ULL0 1709 aa22.97■■□□□ 1.27
SLC39A1-211ENST00000621013 MYOM1P52179 1685 aa22.96■■□□□ 1.27
SLC39A1-211ENST00000621013 TET3O43151 1660 aa22.95■■□□□ 1.27
SLC39A1-211ENST00000621013 SPAG9O60271 1321 aaKnown RBP22.94■■□□□ 1.26
SLC39A1-211ENST00000621013 EIF3AQ14152 1382 aaKnown RBP22.94■■□□□ 1.26
SLC39A1-211ENST00000621013 GOLGA2Q08379 1002 aa22.93■■□□□ 1.26
SLC39A1-211ENST00000621013 C20orf194Q5TEA3 1177 aa22.93■■□□□ 1.26
SLC39A1-211ENST00000621013 USP35Q9P2H5 1018 aa22.93■■□□□ 1.26
SLC39A1-211ENST00000621013 VWDEQ8N2E2 1590 aa22.92■■□□□ 1.26
SLC39A1-211ENST00000621013 CENPQQ7L2Z9 268 aaPredicted RBP22.92■■□□□ 1.26
SLC39A1-211ENST00000621013 DDRGK1Q96HY6 314 aa22.91■■□□□ 1.26
SLC39A1-211ENST00000621013 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.9■■□□□ 1.26
SLC39A1-211ENST00000621013 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
SLC39A1-211ENST00000621013 TRMT2AQ8IZ69 625 aaKnown RBP22.89■■□□□ 1.25
SLC39A1-211ENST00000621013 SLC24A1O60721 1099 aa22.88■■□□□ 1.25
SLC39A1-211ENST00000621013 SLFN5Q08AF3 891 aa22.88■■□□□ 1.25
SLC39A1-211ENST00000621013 PPM1GO15355 546 aaPredicted RBP22.87■■□□□ 1.25
SLC39A1-211ENST00000621013 MYOM2P54296 1465 aa22.86■■□□□ 1.25
SLC39A1-211ENST00000621013 INO80Q9ULG1 1556 aaPredicted RBP22.86■■□□□ 1.25
SLC39A1-211ENST00000621013 KANK1Q14678 1352 aa22.86■■□□□ 1.25
SLC39A1-211ENST00000621013 SKAP1Q86WV1 359 aa22.84■■□□□ 1.25
SLC39A1-211ENST00000621013 AFAP1Q8N556 730 aa22.84■■□□□ 1.25
SLC39A1-211ENST00000621013 ATP7AQ04656 1500 aa22.83■■□□□ 1.25
SLC39A1-211ENST00000621013 MAP3K4Q9Y6R4 1608 aa22.83■■□□□ 1.25
SLC39A1-211ENST00000621013 NGEFQ8N5V2 710 aa22.82■■□□□ 1.24
SLC39A1-211ENST00000621013 NKTRP30414 1462 aaKnown RBP22.82■■□□□ 1.24
SLC39A1-211ENST00000621013 ERVK-7P63135 1459 aa22.82■■□□□ 1.24
SLC39A1-211ENST00000621013 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
SLC39A1-211ENST00000621013 NEFMP07197 916 aa22.81■■□□□ 1.24
SLC39A1-211ENST00000621013 ABCA9Q8IUA7 1624 aa22.8■■□□□ 1.24
SLC39A1-211ENST00000621013 ABCA6Q8N139 1617 aa22.8■■□□□ 1.24
SLC39A1-211ENST00000621013 FAM161AQ3B820 660 aa22.79■■□□□ 1.24
SLC39A1-211ENST00000621013 MROH1Q8NDA8 1641 aa22.77■■□□□ 1.24
SLC39A1-211ENST00000621013 MYO3AQ8NEV4 1616 aa22.77■■□□□ 1.24
SLC39A1-211ENST00000621013 E9PSI1 815 aa22.76■■□□□ 1.23
SLC39A1-211ENST00000621013 SBNO2Q9Y2G9 1366 aa22.76■■□□□ 1.23
SLC39A1-211ENST00000621013 IFT172Q9UG01 1749 aa22.76■■□□□ 1.23
SLC39A1-211ENST00000621013 NRXN1Q9ULB1 1477 aa22.75■■□□□ 1.23
SLC39A1-211ENST00000621013 APAF1O14727 1248 aa22.75■■□□□ 1.23
SLC39A1-211ENST00000621013 C8orf34Q49A92 452 aa22.75■■□□□ 1.23
SLC39A1-211ENST00000621013 CCDC146Q8IYE0 955 aa22.75■■□□□ 1.23
SLC39A1-211ENST00000621013 FANCAO15360 1455 aa22.74■■□□□ 1.23
SLC39A1-211ENST00000621013 SPINK5Q9NQ38 1064 aaPredicted RBP22.74■■□□□ 1.23
SLC39A1-211ENST00000621013 CFAP70Q5T0N1 1121 aa22.73■■□□□ 1.23
SLC39A1-211ENST00000621013 EFCAB6Q5THR3 1501 aa22.73■■□□□ 1.23
SLC39A1-211ENST00000621013 KIF1BO60333 1816 aa22.73■■□□□ 1.23
SLC39A1-211ENST00000621013 POLR3AO14802 1390 aaPredicted RBP22.72■■□□□ 1.23
SLC39A1-211ENST00000621013 CARD14Q9BXL6 1004 aa22.72■■□□□ 1.23
SLC39A1-211ENST00000621013 KIF3BO15066 747 aa22.71■■□□□ 1.23
SLC39A1-211ENST00000621013 NINLQ9Y2I6 1382 aa22.71■■□□□ 1.23
SLC39A1-211ENST00000621013 UGGT1Q9NYU2 1555 aa22.71■■□□□ 1.23
SLC39A1-211ENST00000621013 ADGRF5Q8IZF2 1346 aa22.71■■□□□ 1.23
SLC39A1-211ENST00000621013 LMTK2Q8IWU2 1503 aa22.69■■□□□ 1.22
SLC39A1-211ENST00000621013 SETBP1Q9Y6X0 1596 aa22.69■■□□□ 1.22
SLC39A1-211ENST00000621013 ADGRL1O94910 1474 aa22.68■■□□□ 1.22
SLC39A1-211ENST00000621013 MROH2AA6NES4 1674 aa22.67■■□□□ 1.22
SLC39A1-211ENST00000621013 BCAR3O75815 825 aa22.67■■□□□ 1.22
SLC39A1-211ENST00000621013 PDE3AQ14432 1141 aa22.67■■□□□ 1.22
SLC39A1-211ENST00000621013 CGNL1Q0VF96 1302 aa22.66■■□□□ 1.22
SLC39A1-211ENST00000621013 PPRC1Q5VV67 1664 aaKnown RBP22.65■■□□□ 1.22
SLC39A1-211ENST00000621013 ADGRB3O60242 1522 aa22.65■■□□□ 1.22
SLC39A1-211ENST00000621013 DAXXQ9UER7 740 aaPredicted RBP22.63■■□□□ 1.21
SLC39A1-211ENST00000621013 DMRT2Q9Y5R5 561 aa22.63■■□□□ 1.21
SLC39A1-211ENST00000621013 SHPRHQ149N8 1683 aa22.62■■□□□ 1.21
SLC39A1-211ENST00000621013 CENPJQ9HC77 1338 aaPredicted RBP22.62■■□□□ 1.21
SLC39A1-211ENST00000621013 RGS3P49796 1198 aa22.62■■□□□ 1.21
SLC39A1-211ENST00000621013 WWC1Q8IX03 1113 aa22.62■■□□□ 1.21
SLC39A1-211ENST00000621013 NFKBIBQ15653 356 aa22.61■■□□□ 1.21
SLC39A1-211ENST00000621013 ZC3H13Q5T200 1668 aaKnown RBP22.6■■□□□ 1.21
SLC39A1-211ENST00000621013 VIRMAQ69YN4 1812 aaKnown RBP22.6■■□□□ 1.21
SLC39A1-211ENST00000621013 KIDINS220Q9ULH0 1771 aa22.6■■□□□ 1.21
SLC39A1-211ENST00000621013 USP32Q8NFA0 1604 aa22.59■■□□□ 1.21
SLC39A1-211ENST00000621013 NOS1P29475 1434 aa22.59■■□□□ 1.21
SLC39A1-211ENST00000621013 NSD3Q9BZ95 1437 aa22.59■■□□□ 1.21
SLC39A1-211ENST00000621013 IQSEC2Q5JU85 1478 aa22.58■■□□□ 1.21
SLC39A1-211ENST00000621013 IGHDP01880 384 aa22.58■■□□□ 1.2
SLC39A1-211ENST00000621013 SLC4A3P48751 1232 aa22.58■■□□□ 1.2
SLC39A1-211ENST00000621013 CLUAP1Q96AJ1 413 aa22.57■■□□□ 1.2
SLC39A1-211ENST00000621013 AAMPQ13685 434 aa22.57■■□□□ 1.2
SLC39A1-211ENST00000621013 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
SLC39A1-211ENST00000621013 MAPK8IP3Q9UPT6 1336 aa22.56■■□□□ 1.2
SLC39A1-211ENST00000621013 ADGRB1O14514 1584 aa22.56■■□□□ 1.2
SLC39A1-211ENST00000621013 RUNDC1Q96C34 613 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms