RNA–Protein interactions for RNA: ENST00000620895.1

PMPCA-211, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 3

Gene PMPCA, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-211ENST00000620895 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
PMPCA-211ENST00000620895 RPRD2Q5VT52 1461 aaKnown RBP27.22■■□□□ 1.95
PMPCA-211ENST00000620895 NOS1P29475 1434 aa27.22■■□□□ 1.95
PMPCA-211ENST00000620895 IDI1Q13907 227 aa27.21■■□□□ 1.95
PMPCA-211ENST00000620895 SLC52A1Q9NWF4 448 aa27.2■■□□□ 1.94
PMPCA-211ENST00000620895 ADGRB3O60242 1522 aa27.19■■□□□ 1.94
PMPCA-211ENST00000620895 TET3O43151 1660 aa27.17■■□□□ 1.94
PMPCA-211ENST00000620895 MPHOSPH9Q99550 1183 aa27.14■■□□□ 1.94
PMPCA-211ENST00000620895 SLC4A1APQ9BWU0 796 aaKnown RBP27.14■■□□□ 1.94
PMPCA-211ENST00000620895 XIRP1Q702N8 1843 aaKnown RBP27.12■■□□□ 1.93
PMPCA-211ENST00000620895 KCNA6P17658 529 aa27.11■■□□□ 1.93
PMPCA-211ENST00000620895 PHF23Q9BUL5 403 aaPredicted RBP27.11■■□□□ 1.93
PMPCA-211ENST00000620895 E9PCH4 1651 aa27.11■■□□□ 1.93
PMPCA-211ENST00000620895 HDGFP51858 240 aaKnown RBP27.08■■□□□ 1.93
PMPCA-211ENST00000620895 NKTRP30414 1462 aaKnown RBP27.07■■□□□ 1.92
PMPCA-211ENST00000620895 TMEM94Q12767 1356 aa27.07■■□□□ 1.92
PMPCA-211ENST00000620895 FAM135BQ49AJ0 1406 aa27.06■■□□□ 1.92
PMPCA-211ENST00000620895 SLC26A8Q96RN1 970 aa27.05■■□□□ 1.92
PMPCA-211ENST00000620895 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
PMPCA-211ENST00000620895 FOXD1Q16676 465 aa27.04■■□□□ 1.92
PMPCA-211ENST00000620895 PROSER2Q86WR7 435 aaPredicted RBP27.02■■□□□ 1.92
PMPCA-211ENST00000620895 BCANQ96GW7 911 aa27.02■■□□□ 1.92
PMPCA-211ENST00000620895 ZFYVE9O95405 1425 aa27.01■■□□□ 1.91
PMPCA-211ENST00000620895 PLEKHG1Q9ULL1 1385 aa27.01■■□□□ 1.91
PMPCA-211ENST00000620895 SENP3Q9H4L4 574 aaPredicted RBP27.01■■□□□ 1.91
PMPCA-211ENST00000620895 TMEM131LA2VDJ0 1609 aa26.99■■□□□ 1.91
PMPCA-211ENST00000620895 PPP1R15AO75807 674 aaPredicted RBP26.99■■□□□ 1.91
PMPCA-211ENST00000620895 RIMS2Q9UQ26 1411 aa26.98■■□□□ 1.91
PMPCA-211ENST00000620895 DHX57Q6P158 1386 aaKnown RBP26.97■■□□□ 1.91
PMPCA-211ENST00000620895 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.97■■□□□ 1.91
PMPCA-211ENST00000620895 MYO5BQ9ULV0 1848 aa26.96■■□□□ 1.91
PMPCA-211ENST00000620895 MSH6P52701 1360 aa26.96■■□□□ 1.91
PMPCA-211ENST00000620895 SPHKAPQ2M3C7 1700 aa26.95■■□□□ 1.9
PMPCA-211ENST00000620895 ROBO1Q9Y6N7 1651 aa26.93■■□□□ 1.9
PMPCA-211ENST00000620895 CHD2O14647 1828 aaKnown RBP26.93■■□□□ 1.9
PMPCA-211ENST00000620895 TBX22Q9Y458 520 aa26.91■■□□□ 1.9
PMPCA-211ENST00000620895 DIP2AQ14689 1571 aa26.9■■□□□ 1.9
PMPCA-211ENST00000620895 ANKRD30BQ9BXX2 1392 aa26.9■■□□□ 1.9
PMPCA-211ENST00000620895 NCOA3Q9Y6Q9 1424 aa26.9■■□□□ 1.9
PMPCA-211ENST00000620895 CHGAP10645 457 aaKnown RBP26.89■■□□□ 1.9
PMPCA-211ENST00000620895 TRPM2O94759 1503 aa26.89■■□□□ 1.89
PMPCA-211ENST00000620895 PIK3R4Q99570 1358 aa26.86■■□□□ 1.89
PMPCA-211ENST00000620895 RBM33Q96EV2 1170 aaKnown RBP26.85■■□□□ 1.89
PMPCA-211ENST00000620895 SLAIN2Q9P270 581 aa26.85■■□□□ 1.89
PMPCA-211ENST00000620895 CLTCL1P53675 1640 aa26.83■■□□□ 1.89
PMPCA-211ENST00000620895 ADAMTS13Q76LX8 1427 aa26.81■■□□□ 1.88
PMPCA-211ENST00000620895 CCDC144AA2RUR9 1427 aa26.79■■□□□ 1.88
PMPCA-211ENST00000620895 PHLPP1O60346 1717 aa26.78■■□□□ 1.88
PMPCA-211ENST00000620895 C14orf37Q86TY3 774 aa26.77■■□□□ 1.88
PMPCA-211ENST00000620895 RGS17Q9UGC6 210 aaPredicted RBP26.77■■□□□ 1.88
PMPCA-211ENST00000620895 JCADQ9P266 1359 aa26.75■■□□□ 1.87
PMPCA-211ENST00000620895 CADPS2Q86UW7 1296 aa26.75■■□□□ 1.87
PMPCA-211ENST00000620895 C19orf44Q9H6X5 657 aa26.74■■□□□ 1.87
PMPCA-211ENST00000620895 NUTM2DQ5VT03 806 aaPredicted RBP26.73■■□□□ 1.87
PMPCA-211ENST00000620895 KIF1BO60333 1816 aa26.73■■□□□ 1.87
PMPCA-211ENST00000620895 ATF3P18847 181 aa26.72■■□□□ 1.87
PMPCA-211ENST00000620895 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
PMPCA-211ENST00000620895 SIN3AQ96ST3 1273 aa26.72■■□□□ 1.87
PMPCA-211ENST00000620895 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.7■■□□□ 1.87
PMPCA-211ENST00000620895 SETBP1Q9Y6X0 1596 aa26.7■■□□□ 1.86
PMPCA-211ENST00000620895 COL16A1Q07092 1604 aaPredicted RBP26.68■■□□□ 1.86
PMPCA-211ENST00000620895 SPATA31E1Q6ZUB1 1445 aa26.68■■□□□ 1.86
PMPCA-211ENST00000620895 AMOTL2Q9Y2J4 779 aa26.68■■□□□ 1.86
PMPCA-211ENST00000620895 DCCP43146 1447 aa26.67■■□□□ 1.86
PMPCA-211ENST00000620895 CLSPNQ9HAW4 1339 aa26.66■■□□□ 1.86
PMPCA-211ENST00000620895 AHDC1Q5TGY3 1603 aaPredicted RBP26.65■■□□□ 1.86
PMPCA-211ENST00000620895 ZNF326Q5BKZ1 582 aaKnown RBP26.65■■□□□ 1.86
PMPCA-211ENST00000620895 SPATA31A6Q5VVP1 1343 aa26.65■■□□□ 1.86
PMPCA-211ENST00000620895 NEUROD1Q13562 356 aa26.64■■□□□ 1.86
PMPCA-211ENST00000620895 NRXN3Q9Y4C0 1643 aa26.64■■□□□ 1.85
PMPCA-211ENST00000620895 XRN1Q8IZH2 1706 aaKnown RBP26.63■■□□□ 1.85
PMPCA-211ENST00000620895 RGL3Q3MIN7 710 aa26.63■■□□□ 1.85
PMPCA-211ENST00000620895 POTEAQ6S8J7 498 aa26.63■■□□□ 1.85
PMPCA-211ENST00000620895 PTPRUQ92729 1446 aa26.63■■□□□ 1.85
PMPCA-211ENST00000620895 SHPRHQ149N8 1683 aa26.58■■□□□ 1.85
PMPCA-211ENST00000620895 NEXMIFQ5QGS0 1516 aa26.56■■□□□ 1.84
PMPCA-211ENST00000620895 RPGRIP1LQ68CZ1 1315 aa26.56■■□□□ 1.84
PMPCA-211ENST00000620895 BRINP3Q76B58 766 aa26.54■■□□□ 1.84
PMPCA-211ENST00000620895 MEX3CQ5U5Q3 659 aaKnown RBP26.53■■□□□ 1.84
PMPCA-211ENST00000620895 METP08581 1390 aa26.53■■□□□ 1.84
PMPCA-211ENST00000620895 PPLO60437 1756 aa26.53■■□□□ 1.84
PMPCA-211ENST00000620895 ZNF772Q68DY9 489 aaPredicted RBP26.52■■□□□ 1.84
PMPCA-211ENST00000620895 IFT172Q9UG01 1749 aa26.51■■□□□ 1.83
PMPCA-211ENST00000620895 ASXL1Q8IXJ9 1541 aa26.51■■□□□ 1.83
PMPCA-211ENST00000620895 LRP6O75581 1613 aa26.5■■□□□ 1.83
PMPCA-211ENST00000620895 MST1RQ04912 1400 aa26.5■■□□□ 1.83
PMPCA-211ENST00000620895 ADGRL3Q9HAR2 1447 aa26.5■■□□□ 1.83
PMPCA-211ENST00000620895 VGFO15240 615 aaPredicted RBP26.49■■□□□ 1.83
PMPCA-211ENST00000620895 L3MBTL2Q969R5 705 aa26.49■■□□□ 1.83
PMPCA-211ENST00000620895 DCAF11Q8TEB1 546 aa26.48■■□□□ 1.83
PMPCA-211ENST00000620895 NHSL1Q5SYE7 1610 aa26.47■■□□□ 1.83
PMPCA-211ENST00000620895 KDM2AQ9Y2K7 1162 aa26.45■■□□□ 1.82
PMPCA-211ENST00000620895 TONSLQ96HA7 1378 aa26.45■■□□□ 1.82
PMPCA-211ENST00000620895 ADGRF5Q8IZF2 1346 aa26.44■■□□□ 1.82
PMPCA-211ENST00000620895 PTCH1Q13635 1447 aa26.44■■□□□ 1.82
PMPCA-211ENST00000620895 NALCNQ8IZF0 1738 aa26.43■■□□□ 1.82
PMPCA-211ENST00000620895 LRRC59Q96AG4 307 aaKnown RBP26.43■■□□□ 1.82
PMPCA-211ENST00000620895 MYOM2P54296 1465 aa26.42■■□□□ 1.82
PMPCA-211ENST00000620895 STAC3Q96MF2 364 aa26.41■■□□□ 1.82
PMPCA-211ENST00000620895 PRAG1Q86YV5 1406 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms