RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 ARID4BQ4LE39 1312 aaPredicted RBP19.56■□□□□ 0.72
GRIA3-208ENST00000620581 NWD1Q149M9 1564 aa19.56■□□□□ 0.72
GRIA3-208ENST00000620581 DLC1Q96QB1 1528 aa19.55■□□□□ 0.72
GRIA3-208ENST00000620581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.72
GRIA3-208ENST00000620581 CFAP65Q6ZU64 1925 aaKnown RBP19.54■□□□□ 0.72
GRIA3-208ENST00000620581 TMEM2Q9UHN6 1383 aa19.51■□□□□ 0.71
GRIA3-208ENST00000620581 PLEKHG1Q9ULL1 1385 aa19.51■□□□□ 0.71
GRIA3-208ENST00000620581 ADGRB1O14514 1584 aa19.51■□□□□ 0.71
GRIA3-208ENST00000620581 LMTK3Q96Q04 1460 aa19.5■□□□□ 0.71
GRIA3-208ENST00000620581 XRN1Q8IZH2 1706 aaKnown RBP19.5■□□□□ 0.71
GRIA3-208ENST00000620581 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
GRIA3-208ENST00000620581 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.5■□□□□ 0.71
GRIA3-208ENST00000620581 PIK3R4Q99570 1358 aa19.49■□□□□ 0.71
GRIA3-208ENST00000620581 CPS1P31327 1500 aa19.49■□□□□ 0.71
GRIA3-208ENST00000620581 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
GRIA3-208ENST00000620581 RIMS2Q9UQ26 1411 aa19.48■□□□□ 0.71
GRIA3-208ENST00000620581 SCAF11Q99590 1463 aaKnown RBP19.48■□□□□ 0.71
GRIA3-208ENST00000620581 KDM4FA0A1W2PPD8 638 aa19.48■□□□□ 0.71
GRIA3-208ENST00000620581 TECPR2O15040 1411 aa19.46■□□□□ 0.71
GRIA3-208ENST00000620581 ALKQ9UM73 1620 aa19.46■□□□□ 0.71
GRIA3-208ENST00000620581 STRCQ7RTU9 1775 aa19.46■□□□□ 0.71
GRIA3-208ENST00000620581 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
GRIA3-208ENST00000620581 CHD2O14647 1828 aaKnown RBP19.45■□□□□ 0.7
GRIA3-208ENST00000620581 IDI1Q13907 227 aa19.44■□□□□ 0.7
GRIA3-208ENST00000620581 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
GRIA3-208ENST00000620581 ADGRB2O60241 1585 aa19.43■□□□□ 0.7
GRIA3-208ENST00000620581 ASXL1Q8IXJ9 1541 aa19.43■□□□□ 0.7
GRIA3-208ENST00000620581 PPP1R15AO75807 674 aaPredicted RBP19.41■□□□□ 0.7
GRIA3-208ENST00000620581 THEMISQ8N1K5 641 aaPredicted RBP19.4■□□□□ 0.7
GRIA3-208ENST00000620581 FBXO31Q5XUX0 539 aaPredicted RBP19.39■□□□□ 0.7
GRIA3-208ENST00000620581 VGFO15240 615 aaPredicted RBP19.38■□□□□ 0.69
GRIA3-208ENST00000620581 SIRT1Q96EB6 747 aa19.38■□□□□ 0.69
GRIA3-208ENST00000620581 SBNO2Q9Y2G9 1366 aa19.37■□□□□ 0.69
GRIA3-208ENST00000620581 MLECQ14165 292 aa19.37■□□□□ 0.69
GRIA3-208ENST00000620581 ADAMTS13Q76LX8 1427 aa19.36■□□□□ 0.69
GRIA3-208ENST00000620581 PTCH1Q13635 1447 aa19.36■□□□□ 0.69
GRIA3-208ENST00000620581 FOXD1Q16676 465 aa19.36■□□□□ 0.69
GRIA3-208ENST00000620581 NKTRP30414 1462 aaKnown RBP19.35■□□□□ 0.69
GRIA3-208ENST00000620581 NCOA3Q9Y6Q9 1424 aa19.35■□□□□ 0.69
GRIA3-208ENST00000620581 L3MBTL2Q969R5 705 aa19.34■□□□□ 0.69
GRIA3-208ENST00000620581 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
GRIA3-208ENST00000620581 SIN3AQ96ST3 1273 aa19.32■□□□□ 0.68
GRIA3-208ENST00000620581 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
GRIA3-208ENST00000620581 NPHP4O75161 1426 aaPredicted RBP19.3■□□□□ 0.68
GRIA3-208ENST00000620581 QRICH2Q9H0J4 1663 aa19.3■□□□□ 0.68
GRIA3-208ENST00000620581 LRPPRCP42704 1394 aaKnown RBP19.29■□□□□ 0.68
GRIA3-208ENST00000620581 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
GRIA3-208ENST00000620581 ABCC11Q96J66 1382 aa19.27■□□□□ 0.68
GRIA3-208ENST00000620581 TBX22Q9Y458 520 aa19.26■□□□□ 0.67
GRIA3-208ENST00000620581 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
GRIA3-208ENST00000620581 EIF3AQ14152 1382 aaKnown RBP19.25■□□□□ 0.67
GRIA3-208ENST00000620581 CEBPAP49715 358 aaPredicted RBP19.23■□□□□ 0.67
GRIA3-208ENST00000620581 PUS7Q96PZ0 661 aaKnown RBP19.23■□□□□ 0.67
GRIA3-208ENST00000620581 EID1Q9Y6B2 187 aa19.23■□□□□ 0.67
GRIA3-208ENST00000620581 TOPAZ1Q8N9V7 1692 aa19.23■□□□□ 0.67
GRIA3-208ENST00000620581 CDC42BPGQ6DT37 1551 aa19.22■□□□□ 0.67
GRIA3-208ENST00000620581 YTHDC2Q9H6S0 1430 aaKnown RBP19.21■□□□□ 0.67
GRIA3-208ENST00000620581 ANKLE2Q86XL3 938 aa19.2■□□□□ 0.66
GRIA3-208ENST00000620581 ADGRF5Q8IZF2 1346 aa19.2■□□□□ 0.66
GRIA3-208ENST00000620581 ITSN1Q15811 1721 aa19.2■□□□□ 0.66
GRIA3-208ENST00000620581 STRCP1A6NGW2 1772 aa19.19■□□□□ 0.66
GRIA3-208ENST00000620581 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
GRIA3-208ENST00000620581 NBPF8Q3BBV2 869 aa19.18■□□□□ 0.66
GRIA3-208ENST00000620581 FMN2Q9NZ56 1722 aa19.18■□□□□ 0.66
GRIA3-208ENST00000620581 DCCP43146 1447 aa19.17■□□□□ 0.66
GRIA3-208ENST00000620581 XIRP1Q702N8 1843 aaKnown RBP19.17■□□□□ 0.66
GRIA3-208ENST00000620581 USP32Q8NFA0 1604 aa19.16■□□□□ 0.66
GRIA3-208ENST00000620581 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
GRIA3-208ENST00000620581 ROCK2O75116 1388 aaKnown RBP19.15■□□□□ 0.66
GRIA3-208ENST00000620581 USP54Q70EL1 1684 aa19.15■□□□□ 0.66
GRIA3-208ENST00000620581 STAG3Q9UJ98 1225 aa19.14■□□□□ 0.65
GRIA3-208ENST00000620581 NALCNQ8IZF0 1738 aa19.14■□□□□ 0.65
GRIA3-208ENST00000620581 LTKP29376 864 aa19.14■□□□□ 0.65
GRIA3-208ENST00000620581 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
GRIA3-208ENST00000620581 MYOM1P52179 1685 aa19.13■□□□□ 0.65
GRIA3-208ENST00000620581 ZNF326Q5BKZ1 582 aaKnown RBP19.13■□□□□ 0.65
GRIA3-208ENST00000620581 PTPRUQ92729 1446 aa19.12■□□□□ 0.65
GRIA3-208ENST00000620581 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.11■□□□□ 0.65
GRIA3-208ENST00000620581 TXNDC2Q86VQ3 553 aa19.11■□□□□ 0.65
GRIA3-208ENST00000620581 LTBP4Q8N2S1 1624 aa19.1■□□□□ 0.65
GRIA3-208ENST00000620581 USP47Q96K76 1375 aa19.1■□□□□ 0.65
GRIA3-208ENST00000620581 NINLQ9Y2I6 1382 aa19.1■□□□□ 0.65
GRIA3-208ENST00000620581 KIF1AQ12756 1690 aa19.1■□□□□ 0.65
GRIA3-208ENST00000620581 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.65
GRIA3-208ENST00000620581 AKAP12Q02952 1782 aa19.08■□□□□ 0.65
GRIA3-208ENST00000620581 TULP4Q9NRJ4 1543 aa19.07■□□□□ 0.64
GRIA3-208ENST00000620581 METP08581 1390 aa19.07■□□□□ 0.64
GRIA3-208ENST00000620581 LRRC7Q96NW7 1537 aa19.07■□□□□ 0.64
GRIA3-208ENST00000620581 RGL3Q3MIN7 710 aa19.05■□□□□ 0.64
GRIA3-208ENST00000620581 KCNA6P17658 529 aa19.04■□□□□ 0.64
GRIA3-208ENST00000620581 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
GRIA3-208ENST00000620581 MON2Q7Z3U7 1717 aa19.03■□□□□ 0.64
GRIA3-208ENST00000620581 CHGAP10645 457 aaKnown RBP19.02■□□□□ 0.64
GRIA3-208ENST00000620581 EIF4G2P78344 907 aaKnown RBP eCLIP19.02■□□□□ 0.64
GRIA3-208ENST00000620581 BRD4O60885 1362 aaPredicted RBP19.01■□□□□ 0.63
GRIA3-208ENST00000620581 CFAP70Q5T0N1 1121 aa19.01■□□□□ 0.63
GRIA3-208ENST00000620581 ANKRD26Q9UPS8 1709 aa19.01■□□□□ 0.63
GRIA3-208ENST00000620581 NRKQ7Z2Y5 1582 aa19.01■□□□□ 0.63
GRIA3-208ENST00000620581 MST1RQ04912 1400 aa18.99■□□□□ 0.63
GRIA3-208ENST00000620581 CARD11Q9BXL7 1154 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms