RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 KIF13AQ9H1H9 1805 aa26.12■■□□□ 1.77
PSPC1-206ENST00000619300 NRXN1Q9ULB1 1477 aa26.12■■□□□ 1.77
PSPC1-206ENST00000619300 MRS2Q9HD23 443 aa26.11■■□□□ 1.77
PSPC1-206ENST00000619300 IFT172Q9UG01 1749 aa26.11■■□□□ 1.77
PSPC1-206ENST00000619300 REREQ9P2R6 1566 aa26.11■■□□□ 1.77
PSPC1-206ENST00000619300 IQGAP1P46940 1657 aa26.11■■□□□ 1.77
PSPC1-206ENST00000619300 SIGLEC1Q9BZZ2 1709 aa26.1■■□□□ 1.77
PSPC1-206ENST00000619300 PPP6R1Q9UPN7 881 aa26.09■■□□□ 1.77
PSPC1-206ENST00000619300 AGLP35573 1532 aa26.08■■□□□ 1.77
PSPC1-206ENST00000619300 SLC52A1Q9NWF4 448 aa26.07■■□□□ 1.76
PSPC1-206ENST00000619300 SYNMO15061 1565 aa26.07■■□□□ 1.76
PSPC1-206ENST00000619300 EIF3AQ14152 1382 aaKnown RBP26.06■■□□□ 1.76
PSPC1-206ENST00000619300 PIK3C2BO00750 1634 aa26.06■■□□□ 1.76
PSPC1-206ENST00000619300 IDI1Q13907 227 aa26.05■■□□□ 1.76
PSPC1-206ENST00000619300 CNGB1Q14028 1251 aaPredicted RBP26.04■■□□□ 1.76
PSPC1-206ENST00000619300 KTN1Q86UP2 1357 aaKnown RBP26.03■■□□□ 1.76
PSPC1-206ENST00000619300 PER1O15534 1290 aaPredicted RBP26.02■■□□□ 1.76
PSPC1-206ENST00000619300 HNRNPUQ00839 825 aaKnown RBP eCLIP26.02■■□□□ 1.76
PSPC1-206ENST00000619300 CDCA8Q53HL2 280 aa26.02■■□□□ 1.76
PSPC1-206ENST00000619300 C14orf93Q9H972 538 aaKnown RBP26.02■■□□□ 1.76
PSPC1-206ENST00000619300 RALBP1Q15311 655 aa26.01■■□□□ 1.75
PSPC1-206ENST00000619300 PPLO60437 1756 aa26.01■■□□□ 1.75
PSPC1-206ENST00000619300 PIK3C2GO75747 1445 aa26■■□□□ 1.75
PSPC1-206ENST00000619300 SLC24A1O60721 1099 aa26■■□□□ 1.75
PSPC1-206ENST00000619300 FAM9BQ8IZU0 186 aa26■■□□□ 1.75
PSPC1-206ENST00000619300 VGFO15240 615 aaPredicted RBP25.99■■□□□ 1.75
PSPC1-206ENST00000619300 PANK3Q9H999 370 aa25.98■■□□□ 1.75
PSPC1-206ENST00000619300 FBXO31Q5XUX0 539 aaPredicted RBP25.97■■□□□ 1.75
PSPC1-206ENST00000619300 SETBP1Q9Y6X0 1596 aa25.96■■□□□ 1.75
PSPC1-206ENST00000619300 PREX1Q8TCU6 1659 aa25.96■■□□□ 1.75
PSPC1-206ENST00000619300 ARHGEF40Q8TER5 1519 aa25.95■■□□□ 1.75
PSPC1-206ENST00000619300 MYBBP1AQ9BQG0 1328 aaKnown RBP25.93■■□□□ 1.74
PSPC1-206ENST00000619300 NEXMIFQ5QGS0 1516 aa25.93■■□□□ 1.74
PSPC1-206ENST00000619300 ERVK-7P63135 1459 aa25.92■■□□□ 1.74
PSPC1-206ENST00000619300 MLECQ14165 292 aa25.92■■□□□ 1.74
PSPC1-206ENST00000619300 ZFYVE9O95405 1425 aa25.9■■□□□ 1.74
PSPC1-206ENST00000619300 NUTM2DQ5VT03 806 aaPredicted RBP25.9■■□□□ 1.74
PSPC1-206ENST00000619300 TMC1Q8TDI8 760 aa25.9■■□□□ 1.74
PSPC1-206ENST00000619300 PARD3Q8TEW0 1356 aa25.9■■□□□ 1.74
PSPC1-206ENST00000619300 ADGRB1O14514 1584 aa25.88■■□□□ 1.73
PSPC1-206ENST00000619300 BRD4O60885 1362 aaPredicted RBP25.88■■□□□ 1.73
PSPC1-206ENST00000619300 TMEM131LA2VDJ0 1609 aa25.87■■□□□ 1.73
PSPC1-206ENST00000619300 TMEM132EQ6IEE7 984 aa25.87■■□□□ 1.73
PSPC1-206ENST00000619300 SBNO2Q9Y2G9 1366 aa25.87■■□□□ 1.73
PSPC1-206ENST00000619300 PNISRQ8TF01 805 aaKnown RBP25.87■■□□□ 1.73
PSPC1-206ENST00000619300 TRAK1Q9UPV9 953 aa25.87■■□□□ 1.73
PSPC1-206ENST00000619300 CENPJQ9HC77 1338 aaPredicted RBP25.86■■□□□ 1.73
PSPC1-206ENST00000619300 CLTCQ00610 1675 aaKnown RBP25.86■■□□□ 1.73
PSPC1-206ENST00000619300 MYO3AQ8NEV4 1616 aa25.84■■□□□ 1.73
PSPC1-206ENST00000619300 CC2D1BQ5T0F9 858 aaKnown RBP25.83■■□□□ 1.73
PSPC1-206ENST00000619300 NLRP13Q86W25 1043 aa25.83■■□□□ 1.73
PSPC1-206ENST00000619300 ESF1Q9H501 851 aaKnown RBP25.82■■□□□ 1.72
PSPC1-206ENST00000619300 STAG3Q9UJ98 1225 aa25.81■■□□□ 1.72
PSPC1-206ENST00000619300 KNSTRNQ9Y448 316 aa25.81■■□□□ 1.72
PSPC1-206ENST00000619300 ZBED9Q6R2W3 1325 aa25.8■■□□□ 1.72
PSPC1-206ENST00000619300 SPATA31D1Q6ZQQ2 1576 aa25.8■■□□□ 1.72
PSPC1-206ENST00000619300 KDM5AP29375 1690 aaKnown RBP25.78■■□□□ 1.72
PSPC1-206ENST00000619300 ZMYM3Q14202 1370 aa25.78■■□□□ 1.72
PSPC1-206ENST00000619300 SUPT16HQ9Y5B9 1047 aaKnown RBP25.78■■□□□ 1.72
PSPC1-206ENST00000619300 MYO5BQ9ULV0 1848 aa25.77■■□□□ 1.72
PSPC1-206ENST00000619300 AMER1Q5JTC6 1135 aaPredicted RBP25.75■■□□□ 1.71
PSPC1-206ENST00000619300 LRPPRCP42704 1394 aaKnown RBP25.74■■□□□ 1.71
PSPC1-206ENST00000619300 MYOM1P52179 1685 aa25.73■■□□□ 1.71
PSPC1-206ENST00000619300 A2ML1A8K2U0 1454 aa25.72■■□□□ 1.71
PSPC1-206ENST00000619300 NPC1L1Q9UHC9 1359 aa25.7■■□□□ 1.7
PSPC1-206ENST00000619300 ASXL1Q8IXJ9 1541 aa25.69■■□□□ 1.7
PSPC1-206ENST00000619300 QRICH2Q9H0J4 1663 aa25.69■■□□□ 1.7
PSPC1-206ENST00000619300 PUS7Q96PZ0 661 aaKnown RBP25.68■■□□□ 1.7
PSPC1-206ENST00000619300 SENP3Q9H4L4 574 aaPredicted RBP25.68■■□□□ 1.7
PSPC1-206ENST00000619300 TRHP20396 242 aaPredicted RBP25.66■■□□□ 1.7
PSPC1-206ENST00000619300 STK26Q9P289 416 aa25.66■■□□□ 1.7
PSPC1-206ENST00000619300 NEFLP07196 543 aa25.66■■□□□ 1.7
PSPC1-206ENST00000619300 RIMS2Q9UQ26 1411 aa25.66■■□□□ 1.7
PSPC1-206ENST00000619300 FKBP8Q14318 412 aa25.65■■□□□ 1.7
PSPC1-206ENST00000619300 CARD14Q9BXL6 1004 aa25.65■■□□□ 1.7
PSPC1-206ENST00000619300 EVC2Q86UK5 1308 aa25.65■■□□□ 1.7
PSPC1-206ENST00000619300 ARHGEF28Q8N1W1 1705 aaKnown RBP25.64■■□□□ 1.7
PSPC1-206ENST00000619300 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
PSPC1-206ENST00000619300 PPP2R1AP30153 589 aa25.63■■□□□ 1.69
PSPC1-206ENST00000619300 YTHDC2Q9H6S0 1430 aaKnown RBP25.62■■□□□ 1.69
PSPC1-206ENST00000619300 TNRQ92752 1358 aa25.62■■□□□ 1.69
PSPC1-206ENST00000619300 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.61■■□□□ 1.69
PSPC1-206ENST00000619300 SLC12A5Q9H2X9 1139 aa25.6■■□□□ 1.69
PSPC1-206ENST00000619300 SAFB2Q14151 953 aaKnown RBP eCLIP25.58■■□□□ 1.69
PSPC1-206ENST00000619300 HDGFP51858 240 aaKnown RBP25.58■■□□□ 1.68
PSPC1-206ENST00000619300 PTPRMP28827 1452 aa25.57■■□□□ 1.68
PSPC1-206ENST00000619300 INSRP06213 1382 aa25.57■■□□□ 1.68
PSPC1-206ENST00000619300 TULP4Q9NRJ4 1543 aa25.57■■□□□ 1.68
PSPC1-206ENST00000619300 PRAM1Q96QH2 718 aa25.56■■□□□ 1.68
PSPC1-206ENST00000619300 POGKQ9P215 609 aa25.56■■□□□ 1.68
PSPC1-206ENST00000619300 CABP2Q9NPB3 220 aa25.53■■□□□ 1.68
PSPC1-206ENST00000619300 SMG6Q86US8 1419 aaKnown RBP25.53■■□□□ 1.68
PSPC1-206ENST00000619300 NSD3Q9BZ95 1437 aa25.51■■□□□ 1.67
PSPC1-206ENST00000619300 SENP3-EIF4A1A0A087X0R7 540 aa25.5■■□□□ 1.67
PSPC1-206ENST00000619300 MINK1Q8N4C8 1332 aaPredicted RBP25.5■■□□□ 1.67
PSPC1-206ENST00000619300 SRPK2P78362 688 aaKnown RBP25.49■■□□□ 1.67
PSPC1-206ENST00000619300 NUDCQ9Y266 331 aa25.49■■□□□ 1.67
PSPC1-206ENST00000619300 CEBPAP49715 358 aaPredicted RBP25.48■■□□□ 1.67
PSPC1-206ENST00000619300 TMEM2Q9UHN6 1383 aa25.48■■□□□ 1.67
PSPC1-206ENST00000619300 ANKRD36BQ8N2N9 1353 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms