RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 KTN1Q86UP2 1357 aaKnown RBP5.86□□□□□ -1.47
ATP13A3-211ENST00000619199 CCDC184Q52MB2 194 aa5.86□□□□□ -1.47
ATP13A3-211ENST00000619199 PCMTD1Q96MG8 357 aaPredicted RBP5.85□□□□□ -1.47
ATP13A3-211ENST00000619199 CARMIL1Q5VZK9 1371 aa5.85□□□□□ -1.47
ATP13A3-211ENST00000619199 TXLNBQ8N3L3 684 aa5.85□□□□□ -1.47
ATP13A3-211ENST00000619199 TERF2IPQ9NYB0 399 aa5.85□□□□□ -1.47
ATP13A3-211ENST00000619199 NCOA1Q15788 1441 aa5.85□□□□□ -1.47
ATP13A3-211ENST00000619199 CWC15Q9P013 229 aaKnown RBP5.85□□□□□ -1.47
ATP13A3-211ENST00000619199 EID1Q9Y6B2 187 aa5.85□□□□□ -1.47
ATP13A3-211ENST00000619199 FGD6Q6ZV73 1430 aa5.85□□□□□ -1.47
ATP13A3-211ENST00000619199 HSP90B2PQ58FF3 399 aa5.85□□□□□ -1.47
ATP13A3-211ENST00000619199 RALBP1Q15311 655 aa5.84□□□□□ -1.47
ATP13A3-211ENST00000619199 DNAI2Q9GZS0 605 aa5.84□□□□□ -1.47
ATP13A3-211ENST00000619199 TRIM6-TRIM34B2RNG4 842 aa5.84□□□□□ -1.47
ATP13A3-211ENST00000619199 EZRP15311 586 aaKnown RBP5.84□□□□□ -1.47
ATP13A3-211ENST00000619199 ZNF330Q9Y3S2 320 aaPredicted RBP5.84□□□□□ -1.47
ATP13A3-211ENST00000619199 IGF1RP08069 1367 aa5.84□□□□□ -1.47
ATP13A3-211ENST00000619199 FAM43AQ8N2R8 423 aa5.84□□□□□ -1.47
ATP13A3-211ENST00000619199 BIVM-ERCC5R4GMW8 1640 aa5.84□□□□□ -1.47
ATP13A3-211ENST00000619199 PIP4K2AP48426 406 aaPredicted RBP5.84□□□□□ -1.48
ATP13A3-211ENST00000619199 NAIPQ13075 1403 aa5.84□□□□□ -1.48
ATP13A3-211ENST00000619199 GOLGA6L7A0A1B0GV03 622 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 ITPRIPQ8IWB1 547 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 DESP17661 470 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 PAF1Q8N7H5 531 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 L3MBTL2Q969R5 705 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 SAFBQ15424 915 aaKnown RBP eCLIP5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 NFKBIBQ15653 356 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 AKNAQ7Z591 1439 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 ERICH2A1L162 156 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 CCP110O43303 1012 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 ERLIN2O94905 339 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 TRDNQ13061 729 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 BRMS1Q9HCU9 246 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 INCENPQ9NQS7 918 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 NCAPD3P42695 1498 aa5.83□□□□□ -1.48
ATP13A3-211ENST00000619199 PATL2C9JE40 543 aaKnown RBP5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 RNF20Q5VTR2 975 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 CCAR2Q8N163 923 aaKnown RBP5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 MAP7D2Q96T17 732 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 BRPF3Q9ULD4 1205 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 ROCK2O75116 1388 aaKnown RBP5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 HSP90AB2PQ58FF8 381 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 ZKSCAN1P17029 563 aaPredicted RBP5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 XBP1P17861 261 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 TMEM132AQ24JP5 1023 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 MTERF4Q7Z6M4 381 aaKnown RBP5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 PNISRQ8TF01 805 aaKnown RBP5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 RCAN3Q9UKA8 241 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 OFD1O75665 1012 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 RRP1P56182 461 aaKnown RBP5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 RABEP1Q15276 862 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 CC2D1BQ5T0F9 858 aaKnown RBP5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 FEZ1Q99689 392 aa5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 LUC7LQ9NQ29 371 aaKnown RBP5.82□□□□□ -1.48
ATP13A3-211ENST00000619199 TRIM21P19474 475 aaKnown RBP5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 DHX37Q8IY37 1157 aaKnown RBP5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 ARID3AQ99856 593 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 SEPT11Q9NVA2 429 aaKnown RBP5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 KIF7Q2M1P5 1343 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 AQRO60306 1485 aaKnown RBP eCLIP5.81□□□□□ -1.482e-6■■■■□ 24.7
ATP13A3-211ENST00000619199 TRHP20396 242 aaPredicted RBP5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 CPLX1O14810 134 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 FYCO1Q9BQS8 1478 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 U2AF1L5P0DN76 240 aaPredicted RBP5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 EPS15P42566 896 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 U2AF1Q01081 240 aaKnown RBP eCLIP5.81□□□□□ -1.482e-9■■■■□ 22.3
ATP13A3-211ENST00000619199 ZNF771Q7L3S4 317 aaPredicted RBP5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 STK11IPQ8N1F8 1099 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 NGEFQ8N5V2 710 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 CASKIN1Q8WXD9 1431 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 HSP90AB4PQ58FF6 505 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 CHMP5Q9NZZ3 219 aa5.81□□□□□ -1.48
ATP13A3-211ENST00000619199 ROCK1Q13464 1354 aa5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 MIA2Q96PC5 1412 aa5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 MNS1Q8NEH6 495 aa5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 NAT10Q9H0A0 1025 aaKnown RBP5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 REC8O95072 547 aa5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 MFAP1P55081 439 aaKnown RBP5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 HSP90AA2PQ14568 343 aaPredicted RBP5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 SYCP1Q15431 976 aa5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 DHX16O60231 1041 aaKnown RBP5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 DDX58O95786 925 aaKnown RBP5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 C1orf141Q5JVX7 400 aa5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 HOMER1Q86YM7 354 aa5.8□□□□□ -1.48
ATP13A3-211ENST00000619199 APBB1O00213 710 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 MPHOSPH9Q99550 1183 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 DIAPH3Q9NSV4 1193 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 H0YHG0 523 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 AMPHP49418 695 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 EXOC6Q8TAG9 804 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 SMARCE1Q969G3 411 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 CENPJQ9HC77 1338 aaPredicted RBP5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 MYOM3Q5VTT5 1437 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 CCDC66A2RUB6 948 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 NAP1L1P55209 391 aaKnown RBP5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 OLFM4Q6UX06 510 aa5.79□□□□□ -1.48
ATP13A3-211ENST00000619199 BRD4O60885 1362 aaPredicted RBP5.78□□□□□ -1.48
ATP13A3-211ENST00000619199 USP8P40818 1118 aa5.78□□□□□ -1.48
ATP13A3-211ENST00000619199 ZFYVE27Q5T4F4 411 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms