RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-223ENST00000619193 CFDP1Q9UEE9 299 aaPredicted RBP8.17□□□□□ -1.1
RDM1-223ENST00000619193 MAGI2Q86UL8 1455 aa8.17□□□□□ -1.1
RDM1-223ENST00000619193 PLXNC1O60486 1568 aa8.16□□□□□ -1.1
RDM1-223ENST00000619193 GPRASP1Q5JY77 1395 aa8.16□□□□□ -1.1
RDM1-223ENST00000619193 FAM135AQ9P2D6 1515 aa8.16□□□□□ -1.1
RDM1-223ENST00000619193 CDK11AQ9UQ88 783 aaPredicted RBP8.16□□□□□ -1.1
RDM1-223ENST00000619193 IQGAP3Q86VI3 1631 aa8.15□□□□□ -1.1
RDM1-223ENST00000619193 RNF17Q9BXT8 1623 aaKnown RBP8.15□□□□□ -1.1
RDM1-223ENST00000619193 PRDM15P57071 1507 aaPredicted RBP8.15□□□□□ -1.1
RDM1-223ENST00000619193 PNISRQ8TF01 805 aaKnown RBP8.15□□□□□ -1.1
RDM1-223ENST00000619193 UPF1Q92900 1129 aaKnown RBP eCLIP8.15□□□□□ -1.1
RDM1-223ENST00000619193 A2MP01023 1474 aa8.14□□□□□ -1.11
RDM1-223ENST00000619193 CCDC141Q6ZP82 1450 aa8.14□□□□□ -1.11
RDM1-223ENST00000619193 PRAG1Q86YV5 1406 aa8.14□□□□□ -1.11
RDM1-223ENST00000619193 ROCK2O75116 1388 aaKnown RBP8.14□□□□□ -1.11
RDM1-223ENST00000619193 ATP10AO60312 1499 aa8.13□□□□□ -1.11
RDM1-223ENST00000619193 KIF15Q9NS87 1388 aa8.13□□□□□ -1.11
RDM1-223ENST00000619193 MYO5CQ9NQX4 1742 aa8.12□□□□□ -1.11
RDM1-223ENST00000619193 NUP155O75694 1391 aa8.12□□□□□ -1.11
RDM1-223ENST00000619193 PARD3Q8TEW0 1356 aa8.12□□□□□ -1.11
RDM1-223ENST00000619193 TOM1O60784 492 aa8.12□□□□□ -1.11
RDM1-223ENST00000619193 FAM9BQ8IZU0 186 aa8.12□□□□□ -1.11
RDM1-223ENST00000619193 NUDCQ9Y266 331 aa8.12□□□□□ -1.11
RDM1-223ENST00000619193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.12□□□□□ -1.11
RDM1-223ENST00000619193 BRD4O60885 1362 aaPredicted RBP8.11□□□□□ -1.11
RDM1-223ENST00000619193 INSRP06213 1382 aa8.11□□□□□ -1.11
RDM1-223ENST00000619193 SYCP2Q9BX26 1530 aa8.11□□□□□ -1.11
RDM1-223ENST00000619193 KTN1Q86UP2 1357 aaKnown RBP8.1□□□□□ -1.11
RDM1-223ENST00000619193 B4GALNT3Q6L9W6 998 aa8.1□□□□□ -1.11
RDM1-223ENST00000619193 RBM42Q9BTD8 480 aaKnown RBP8.1□□□□□ -1.11
RDM1-223ENST00000619193 TRAPPC8Q9Y2L5 1435 aa8.1□□□□□ -1.11
RDM1-223ENST00000619193 IQGAP1P46940 1657 aa8.09□□□□□ -1.11
RDM1-223ENST00000619193 PER1O15534 1290 aaPredicted RBP8.09□□□□□ -1.11
RDM1-223ENST00000619193 MKRN4PQ13434 485 aaPredicted RBP8.09□□□□□ -1.11
RDM1-223ENST00000619193 BLMP54132 1417 aaPredicted RBP8.09□□□□□ -1.11
RDM1-223ENST00000619193 TESK2Q96S53 571 aa8.08□□□□□ -1.12
RDM1-223ENST00000619193 CPS1P31327 1500 aa8.08□□□□□ -1.12
RDM1-223ENST00000619193 ZNF142P52746 1687 aaPredicted RBP8.08□□□□□ -1.12
RDM1-223ENST00000619193 MYO3AQ8NEV4 1616 aa8.07□□□□□ -1.12
RDM1-223ENST00000619193 EIF2AK4Q9P2K8 1649 aaKnown RBP8.07□□□□□ -1.12
RDM1-223ENST00000619193 CFAP74Q9C0B2 1584 aa8.07□□□□□ -1.12
RDM1-223ENST00000619193 ST20-MTHFSA0A0A6YYL1 179 aa8.07□□□□□ -1.12
RDM1-223ENST00000619193 PLEKHD1A6NEE1 506 aa8.07□□□□□ -1.12
RDM1-223ENST00000619193 HNRNPMP52272 730 aaKnown RBP eCLIP8.07□□□□□ -1.12
RDM1-223ENST00000619193 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
RDM1-223ENST00000619193 PLEKHH2Q8IVE3 1493 aa8.06□□□□□ -1.12
RDM1-223ENST00000619193 MYBBP1AQ9BQG0 1328 aaKnown RBP8.06□□□□□ -1.12
RDM1-223ENST00000619193 NEURL4Q96JN8 1562 aa8.06□□□□□ -1.12
RDM1-223ENST00000619193 SETBP1Q9Y6X0 1596 aa8.06□□□□□ -1.12
RDM1-223ENST00000619193 ABCC1P33527 1531 aa8.06□□□□□ -1.12
RDM1-223ENST00000619193 DUOX2Q9NRD8 1548 aa8.06□□□□□ -1.12
RDM1-223ENST00000619193 DEPDC5O75140 1603 aa8.06□□□□□ -1.12
RDM1-223ENST00000619193 VWDEQ8N2E2 1590 aa8.05□□□□□ -1.12
RDM1-223ENST00000619193 RALBP1Q15311 655 aa8.05□□□□□ -1.12
RDM1-223ENST00000619193 CARD11Q9BXL7 1154 aa8.05□□□□□ -1.12
RDM1-223ENST00000619193 SRCAPQ6ZRS2 3230 aa8.05□□□□□ -1.12
RDM1-223ENST00000619193 DIP2CQ9Y2E4 1556 aa8.05□□□□□ -1.12
RDM1-223ENST00000619193 CEP170BQ9Y4F5 1589 aaPredicted RBP8.05□□□□□ -1.12
RDM1-223ENST00000619193 MYOM1P52179 1685 aa8.05□□□□□ -1.12
RDM1-223ENST00000619193 STRCP1A6NGW2 1772 aa8.05□□□□□ -1.12
RDM1-223ENST00000619193 SPHKAPQ2M3C7 1700 aa8.04□□□□□ -1.12
RDM1-223ENST00000619193 NBPF1Q3BBV0 1214 aa8.04□□□□□ -1.12
RDM1-223ENST00000619193 ERBINQ96RT1 1412 aa8.03□□□□□ -1.12
RDM1-223ENST00000619193 CEP152O94986 1710 aa8.03□□□□□ -1.12
RDM1-223ENST00000619193 ABCA6Q8N139 1617 aa8.03□□□□□ -1.12
RDM1-223ENST00000619193 TRPM2O94759 1503 aa8.03□□□□□ -1.12
RDM1-223ENST00000619193 ARHGAP5Q13017 1502 aa8.03□□□□□ -1.12
RDM1-223ENST00000619193 LRRC7Q96NW7 1537 aa8.03□□□□□ -1.12
RDM1-223ENST00000619193 CCDC144AA2RUR9 1427 aa8.03□□□□□ -1.12
RDM1-223ENST00000619193 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
RDM1-223ENST00000619193 ZNF326Q5BKZ1 582 aaKnown RBP8.02□□□□□ -1.13
RDM1-223ENST00000619193 RSPH4AQ5TD94 716 aa8.02□□□□□ -1.13
RDM1-223ENST00000619193 BCL11AQ9H165 835 aa8.02□□□□□ -1.13
RDM1-223ENST00000619193 CLTCL1P53675 1640 aa8.02□□□□□ -1.13
RDM1-223ENST00000619193 MROH1Q8NDA8 1641 aa8.02□□□□□ -1.13
RDM1-223ENST00000619193 PLCH2O75038 1416 aa8.02□□□□□ -1.13
RDM1-223ENST00000619193 PAK3O75914 559 aaPredicted RBP8.01□□□□□ -1.13
RDM1-223ENST00000619193 RRP1P56182 461 aaKnown RBP8.01□□□□□ -1.13
RDM1-223ENST00000619193 DCAF11Q8TEB1 546 aa8.01□□□□□ -1.13
RDM1-223ENST00000619193 INO80Q9ULG1 1556 aaPredicted RBP8.01□□□□□ -1.13
RDM1-223ENST00000619193 KIAA1210Q9ULL0 1709 aa8□□□□□ -1.13
RDM1-223ENST00000619193 TSPY4P0CV99 314 aa8□□□□□ -1.13
RDM1-223ENST00000619193 TSPY10P0CW01 314 aa8□□□□□ -1.13
RDM1-223ENST00000619193 NLRP13Q86W25 1043 aa8□□□□□ -1.13
RDM1-223ENST00000619193 SYNMO15061 1565 aa8□□□□□ -1.13
RDM1-223ENST00000619193 IFT172Q9UG01 1749 aa8□□□□□ -1.13
RDM1-223ENST00000619193 WASHC2CQ9Y4E1 1318 aa8□□□□□ -1.13
RDM1-223ENST00000619193 TET3O43151 1660 aa7.99□□□□□ -1.13
RDM1-223ENST00000619193 NPATQ14207 1427 aa7.99□□□□□ -1.13
RDM1-223ENST00000619193 IFFO2Q5TF58 517 aa7.99□□□□□ -1.13
RDM1-223ENST00000619193 KDM2AQ9Y2K7 1162 aa7.99□□□□□ -1.13
RDM1-223ENST00000619193 ZNF521Q96K83 1311 aa7.99□□□□□ -1.13
RDM1-223ENST00000619193 REREQ9P2R6 1566 aa7.98□□□□□ -1.13
RDM1-223ENST00000619193 SPDYE2BA6NHP3 402 aa7.98□□□□□ -1.13
RDM1-223ENST00000619193 SPDYE6P0CI01 402 aa7.98□□□□□ -1.13
RDM1-223ENST00000619193 PDE3BQ13370 1112 aa7.98□□□□□ -1.13
RDM1-223ENST00000619193 SPDYE2Q495Y8 402 aa7.98□□□□□ -1.13
RDM1-223ENST00000619193 EXOC6Q8TAG9 804 aa7.98□□□□□ -1.13
RDM1-223ENST00000619193 TMC1Q8TDI8 760 aa7.98□□□□□ -1.13
RDM1-223ENST00000619193 MROH2AA6NES4 1674 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms