RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 KIDINS220Q9ULH0 1771 aa9.4□□□□□ -0.9
SRGAP3-213ENST00000618999 UNC13BO14795 1591 aa9.4□□□□□ -0.9
SRGAP3-213ENST00000618999 HECW2Q9P2P5 1572 aa9.4□□□□□ -0.9
SRGAP3-213ENST00000618999 KDM5CP41229 1560 aa9.39□□□□□ -0.91
SRGAP3-213ENST00000618999 RGL2O15211 777 aa9.39□□□□□ -0.91
SRGAP3-213ENST00000618999 B4GALNT3Q6L9W6 998 aa9.39□□□□□ -0.91
SRGAP3-213ENST00000618999 DNAJC5Q9H3Z4 198 aa9.39□□□□□ -0.91
SRGAP3-213ENST00000618999 PLA2R1Q13018 1463 aa9.39□□□□□ -0.91
SRGAP3-213ENST00000618999 IQGAP3Q86VI3 1631 aa9.38□□□□□ -0.91
SRGAP3-213ENST00000618999 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
SRGAP3-213ENST00000618999 MAGI2Q86UL8 1455 aa9.37□□□□□ -0.91
SRGAP3-213ENST00000618999 CCDC136Q96JN2 1154 aa9.37□□□□□ -0.91
SRGAP3-213ENST00000618999 ROCK2O75116 1388 aaKnown RBP9.36□□□□□ -0.91
SRGAP3-213ENST00000618999 MSH5O43196 834 aa9.36□□□□□ -0.91
SRGAP3-213ENST00000618999 ATP10AO60312 1499 aa9.36□□□□□ -0.91
SRGAP3-213ENST00000618999 NOP58Q9Y2X3 529 aaKnown RBP9.36□□□□□ -0.91
SRGAP3-213ENST00000618999 NBPF1Q3BBV0 1214 aa9.35□□□□□ -0.91
SRGAP3-213ENST00000618999 COL17A1Q9UMD9 1497 aaPredicted RBP9.35□□□□□ -0.91
SRGAP3-213ENST00000618999 ABCA6Q8N139 1617 aa9.35□□□□□ -0.91
SRGAP3-213ENST00000618999 DEKP35659 375 aaKnown RBP9.35□□□□□ -0.91
SRGAP3-213ENST00000618999 RNF216Q9NWF9 866 aaPredicted RBP9.35□□□□□ -0.91
SRGAP3-213ENST00000618999 USP47Q96K76 1375 aa9.34□□□□□ -0.91
SRGAP3-213ENST00000618999 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
SRGAP3-213ENST00000618999 NEUROD2Q15784 382 aa9.34□□□□□ -0.91
SRGAP3-213ENST00000618999 NUTM2DQ5VT03 806 aaPredicted RBP9.34□□□□□ -0.91
SRGAP3-213ENST00000618999 ST20-MTHFSA0A0A6YYL1 179 aa9.34□□□□□ -0.91
SRGAP3-213ENST00000618999 FBXO31Q5XUX0 539 aaPredicted RBP9.34□□□□□ -0.91
SRGAP3-213ENST00000618999 DIP2CQ9Y2E4 1556 aa9.34□□□□□ -0.92
SRGAP3-213ENST00000618999 ZBTB47Q9UFB7 747 aaPredicted RBP9.33□□□□□ -0.92
SRGAP3-213ENST00000618999 EIF2AK4Q9P2K8 1649 aaKnown RBP9.33□□□□□ -0.92
SRGAP3-213ENST00000618999 FRMPD1Q5SYB0 1578 aa9.33□□□□□ -0.92
SRGAP3-213ENST00000618999 NPATQ14207 1427 aa9.33□□□□□ -0.92
SRGAP3-213ENST00000618999 RICTORQ6R327 1708 aa9.32□□□□□ -0.92
SRGAP3-213ENST00000618999 PRDM15P57071 1507 aaPredicted RBP9.32□□□□□ -0.92
SRGAP3-213ENST00000618999 CFAP65Q6ZU64 1925 aaKnown RBP9.32□□□□□ -0.92
SRGAP3-213ENST00000618999 PTPRTO14522 1441 aa9.32□□□□□ -0.92
SRGAP3-213ENST00000618999 WASHC2AQ641Q2 1341 aa9.32□□□□□ -0.92
SRGAP3-213ENST00000618999 IDI1Q13907 227 aa9.32□□□□□ -0.92
SRGAP3-213ENST00000618999 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
SRGAP3-213ENST00000618999 TET3O43151 1660 aa9.31□□□□□ -0.92
SRGAP3-213ENST00000618999 PLCD3Q8N3E9 789 aa9.31□□□□□ -0.92
SRGAP3-213ENST00000618999 STAC3Q96MF2 364 aa9.31□□□□□ -0.92
SRGAP3-213ENST00000618999 E9PCH4 1651 aa9.31□□□□□ -0.92
SRGAP3-213ENST00000618999 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
SRGAP3-213ENST00000618999 PRKRIP1Q9H875 184 aaPredicted RBP9.31□□□□□ -0.92
SRGAP3-213ENST00000618999 SLC52A1Q9NWF4 448 aa9.31□□□□□ -0.92
SRGAP3-213ENST00000618999 UHRF1BP1Q6BDS2 1440 aa9.3□□□□□ -0.92
SRGAP3-213ENST00000618999 DEPDC5O75140 1603 aa9.3□□□□□ -0.92
SRGAP3-213ENST00000618999 KIF13AQ9H1H9 1805 aa9.3□□□□□ -0.92
SRGAP3-213ENST00000618999 PRAG1Q86YV5 1406 aa9.3□□□□□ -0.92
SRGAP3-213ENST00000618999 CFAP70Q5T0N1 1121 aa9.3□□□□□ -0.92
SRGAP3-213ENST00000618999 UGGT1Q9NYU2 1555 aa9.3□□□□□ -0.92
SRGAP3-213ENST00000618999 MROH1Q8NDA8 1641 aa9.3□□□□□ -0.92
SRGAP3-213ENST00000618999 SPATA31E1Q6ZUB1 1445 aa9.29□□□□□ -0.92
SRGAP3-213ENST00000618999 PPRC1Q5VV67 1664 aaKnown RBP9.29□□□□□ -0.92
SRGAP3-213ENST00000618999 ABCC3O15438 1527 aa9.29□□□□□ -0.92
SRGAP3-213ENST00000618999 TRPM2O94759 1503 aa9.29□□□□□ -0.92
SRGAP3-213ENST00000618999 EFCAB6Q5THR3 1501 aa9.29□□□□□ -0.92
SRGAP3-213ENST00000618999 VWDEQ8N2E2 1590 aa9.29□□□□□ -0.92
SRGAP3-213ENST00000618999 ADGRF5Q8IZF2 1346 aa9.29□□□□□ -0.92
SRGAP3-213ENST00000618999 CNTLNQ9NXG0 1405 aa9.29□□□□□ -0.92
SRGAP3-213ENST00000618999 ZMYM4Q5VZL5 1548 aa9.29□□□□□ -0.92
SRGAP3-213ENST00000618999 TMC1Q8TDI8 760 aa9.28□□□□□ -0.92
SRGAP3-213ENST00000618999 KIF7Q2M1P5 1343 aa9.28□□□□□ -0.92
SRGAP3-213ENST00000618999 CCDC7Q96M83 1385 aa9.28□□□□□ -0.92
SRGAP3-213ENST00000618999 RALGAPBQ86X10 1494 aa9.28□□□□□ -0.92
SRGAP3-213ENST00000618999 CEP152O94986 1710 aa9.28□□□□□ -0.92
SRGAP3-213ENST00000618999 LMTK2Q8IWU2 1503 aa9.27□□□□□ -0.92
SRGAP3-213ENST00000618999 VGFO15240 615 aaPredicted RBP9.27□□□□□ -0.92
SRGAP3-213ENST00000618999 RNF17Q9BXT8 1623 aaKnown RBP9.27□□□□□ -0.93
SRGAP3-213ENST00000618999 CLTCL1P53675 1640 aa9.26□□□□□ -0.93
SRGAP3-213ENST00000618999 SPHKAPQ2M3C7 1700 aa9.26□□□□□ -0.93
SRGAP3-213ENST00000618999 NOS1P29475 1434 aa9.26□□□□□ -0.93
SRGAP3-213ENST00000618999 RPGRIP1LQ68CZ1 1315 aa9.25□□□□□ -0.93
SRGAP3-213ENST00000618999 CEBPAP49715 358 aaPredicted RBP9.25□□□□□ -0.93
SRGAP3-213ENST00000618999 TMF1P82094 1093 aa9.25□□□□□ -0.93
SRGAP3-213ENST00000618999 TMEM132EQ6IEE7 984 aa9.25□□□□□ -0.93
SRGAP3-213ENST00000618999 ZMYM3Q14202 1370 aa9.25□□□□□ -0.93
SRGAP3-213ENST00000618999 CCDC184Q52MB2 194 aa9.24□□□□□ -0.93
SRGAP3-213ENST00000618999 TRAK1Q9UPV9 953 aa9.24□□□□□ -0.93
SRGAP3-213ENST00000618999 NUDCQ9Y266 331 aa9.24□□□□□ -0.93
SRGAP3-213ENST00000618999 IPO9Q96P70 1041 aaKnown RBP9.24□□□□□ -0.93
SRGAP3-213ENST00000618999 ARHGAP31Q2M1Z3 1444 aa9.24□□□□□ -0.93
SRGAP3-213ENST00000618999 STK26Q9P289 416 aa9.24□□□□□ -0.93
SRGAP3-213ENST00000618999 AGLP35573 1532 aa9.23□□□□□ -0.93
SRGAP3-213ENST00000618999 SENP3-EIF4A1A0A087X0R7 540 aa9.22□□□□□ -0.93
SRGAP3-213ENST00000618999 ARHGEF40Q8TER5 1519 aa9.22□□□□□ -0.93
SRGAP3-213ENST00000618999 CAMSAP1Q5T5Y3 1602 aa9.22□□□□□ -0.93
SRGAP3-213ENST00000618999 GPRASP1Q5JY77 1395 aa9.21□□□□□ -0.93
SRGAP3-213ENST00000618999 SAFB2Q14151 953 aaKnown RBP eCLIP9.21□□□□□ -0.93
SRGAP3-213ENST00000618999 C14orf93Q9H972 538 aaKnown RBP9.21□□□□□ -0.94
SRGAP3-213ENST00000618999 EIF3AQ14152 1382 aaKnown RBP9.21□□□□□ -0.94
SRGAP3-213ENST00000618999 CDCA8Q53HL2 280 aa9.21□□□□□ -0.94
SRGAP3-213ENST00000618999 HDGFP51858 240 aaKnown RBP9.2□□□□□ -0.94
SRGAP3-213ENST00000618999 KIF1BO60333 1816 aa9.2□□□□□ -0.94
SRGAP3-213ENST00000618999 SALL2Q9Y467 1007 aaPredicted RBP9.2□□□□□ -0.94
SRGAP3-213ENST00000618999 ERVK-7P63135 1459 aa9.2□□□□□ -0.94
SRGAP3-213ENST00000618999 BCORL1Q5H9F3 1711 aa9.19□□□□□ -0.94
SRGAP3-213ENST00000618999 TESK2Q96S53 571 aa9.19□□□□□ -0.94
SRGAP3-213ENST00000618999 REREQ9P2R6 1566 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms