RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 PREX1Q8TCU6 1659 aa15.64■□□□□ 0.09
CPEB1-216ENST00000618449 ADGRF5Q8IZF2 1346 aa15.63■□□□□ 0.09
CPEB1-216ENST00000618449 CLTCQ00610 1675 aaKnown RBP15.63■□□□□ 0.09
CPEB1-216ENST00000618449 FBXO31Q5XUX0 539 aaPredicted RBP15.63■□□□□ 0.09
CPEB1-216ENST00000618449 CCER2I3L3R5 266 aa15.62■□□□□ 0.09
CPEB1-216ENST00000618449 IDI1Q13907 227 aa15.62■□□□□ 0.09
CPEB1-216ENST00000618449 SLC52A1Q9NWF4 448 aa15.61■□□□□ 0.09
CPEB1-216ENST00000618449 ARID4BQ4LE39 1312 aaPredicted RBP15.61■□□□□ 0.09
CPEB1-216ENST00000618449 NRXN1Q9ULB1 1477 aa15.6■□□□□ 0.09
CPEB1-216ENST00000618449 ERVK-7P63135 1459 aa15.6■□□□□ 0.09
CPEB1-216ENST00000618449 POLR3GLQ9BT43 218 aa15.59■□□□□ 0.09
CPEB1-216ENST00000618449 RPGRIP1LQ68CZ1 1315 aa15.59■□□□□ 0.09
CPEB1-216ENST00000618449 PPLO60437 1756 aa15.59■□□□□ 0.09
CPEB1-216ENST00000618449 CFAP70Q5T0N1 1121 aa15.59■□□□□ 0.09
CPEB1-216ENST00000618449 KIAA1210Q9ULL0 1709 aa15.59■□□□□ 0.09
CPEB1-216ENST00000618449 TESK2Q96S53 571 aa15.57■□□□□ 0.08
CPEB1-216ENST00000618449 IQGAP1P46940 1657 aa15.57■□□□□ 0.08
CPEB1-216ENST00000618449 ESF1Q9H501 851 aaKnown RBP15.56■□□□□ 0.08
CPEB1-216ENST00000618449 SCAF11Q99590 1463 aaKnown RBP15.56■□□□□ 0.08
CPEB1-216ENST00000618449 NEXMIFQ5QGS0 1516 aa15.55■□□□□ 0.08
CPEB1-216ENST00000618449 PIK3C2GO75747 1445 aa15.55■□□□□ 0.08
CPEB1-216ENST00000618449 TMEM131LA2VDJ0 1609 aa15.55■□□□□ 0.08
CPEB1-216ENST00000618449 SPATA31D1Q6ZQQ2 1576 aa15.55■□□□□ 0.08
CPEB1-216ENST00000618449 ZMYM3Q14202 1370 aa15.54■□□□□ 0.08
CPEB1-216ENST00000618449 NUTM2DQ5VT03 806 aaPredicted RBP15.54■□□□□ 0.08
CPEB1-216ENST00000618449 MYO5BQ9ULV0 1848 aa15.53■□□□□ 0.08
CPEB1-216ENST00000618449 VGFO15240 615 aaPredicted RBP15.52■□□□□ 0.08
CPEB1-216ENST00000618449 C14orf93Q9H972 538 aaKnown RBP15.52■□□□□ 0.08
CPEB1-216ENST00000618449 DISP3Q9P2K9 1392 aa15.52■□□□□ 0.08
CPEB1-216ENST00000618449 TMF1P82094 1093 aa15.5■□□□□ 0.07
CPEB1-216ENST00000618449 SETBP1Q9Y6X0 1596 aa15.5■□□□□ 0.07
CPEB1-216ENST00000618449 EIF3AQ14152 1382 aaKnown RBP15.5■□□□□ 0.07
CPEB1-216ENST00000618449 ZFYVE9O95405 1425 aa15.49■□□□□ 0.07
CPEB1-216ENST00000618449 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
CPEB1-216ENST00000618449 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
CPEB1-216ENST00000618449 ADGRB1O14514 1584 aa15.48■□□□□ 0.07
CPEB1-216ENST00000618449 TMEM132EQ6IEE7 984 aa15.47■□□□□ 0.07
CPEB1-216ENST00000618449 A2ML1A8K2U0 1454 aa15.47■□□□□ 0.07
CPEB1-216ENST00000618449 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
CPEB1-216ENST00000618449 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
CPEB1-216ENST00000618449 TRAK1Q9UPV9 953 aa15.44■□□□□ 0.06
CPEB1-216ENST00000618449 TNRQ92752 1358 aa15.44■□□□□ 0.06
CPEB1-216ENST00000618449 MYO3AQ8NEV4 1616 aa15.42■□□□□ 0.06
CPEB1-216ENST00000618449 CEBPAP49715 358 aaPredicted RBP15.42■□□□□ 0.06
CPEB1-216ENST00000618449 CNGB1Q14028 1251 aaPredicted RBP15.41■□□□□ 0.06
CPEB1-216ENST00000618449 RIMS2Q9UQ26 1411 aa15.41■□□□□ 0.06
CPEB1-216ENST00000618449 CENPJQ9HC77 1338 aaPredicted RBP15.41■□□□□ 0.06
CPEB1-216ENST00000618449 CDCA8Q53HL2 280 aa15.4■□□□□ 0.06
CPEB1-216ENST00000618449 CCDC184Q52MB2 194 aa15.4■□□□□ 0.06
CPEB1-216ENST00000618449 FER1L4A9Z1Z3 1794 aa15.39■□□□□ 0.05
CPEB1-216ENST00000618449 ASXL1Q8IXJ9 1541 aa15.39■□□□□ 0.05
CPEB1-216ENST00000618449 SLC24A1O60721 1099 aa15.39■□□□□ 0.05
CPEB1-216ENST00000618449 SBNO2Q9Y2G9 1366 aa15.39■□□□□ 0.05
CPEB1-216ENST00000618449 PER1O15534 1290 aaPredicted RBP15.39■□□□□ 0.05
CPEB1-216ENST00000618449 PANK3Q9H999 370 aa15.38■□□□□ 0.05
CPEB1-216ENST00000618449 C3P01024 1663 aa15.38■□□□□ 0.05
CPEB1-216ENST00000618449 ALKQ9UM73 1620 aa15.37■□□□□ 0.05
CPEB1-216ENST00000618449 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
CPEB1-216ENST00000618449 QRICH2Q9H0J4 1663 aa15.36■□□□□ 0.05
CPEB1-216ENST00000618449 UBR1Q8IWV7 1749 aa15.36■□□□□ 0.05
CPEB1-216ENST00000618449 ARHGEF28Q8N1W1 1705 aaKnown RBP15.36■□□□□ 0.05
CPEB1-216ENST00000618449 KDM5AP29375 1690 aaKnown RBP15.36■□□□□ 0.05
CPEB1-216ENST00000618449 STK26Q9P289 416 aa15.35■□□□□ 0.05
CPEB1-216ENST00000618449 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.35■□□□□ 0.05
CPEB1-216ENST00000618449 MRS2Q9HD23 443 aa15.35■□□□□ 0.05
CPEB1-216ENST00000618449 NLRP1Q9C000 1473 aa15.35■□□□□ 0.05
CPEB1-216ENST00000618449 MYOM1P52179 1685 aa15.34■□□□□ 0.05
CPEB1-216ENST00000618449 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
CPEB1-216ENST00000618449 TMEM2Q9UHN6 1383 aa15.33■□□□□ 0.04
CPEB1-216ENST00000618449 PTPRMP28827 1452 aa15.33■□□□□ 0.04
CPEB1-216ENST00000618449 HNRNPUQ00839 825 aaKnown RBP eCLIP15.33■□□□□ 0.04
CPEB1-216ENST00000618449 KTN1Q86UP2 1357 aaKnown RBP15.32■□□□□ 0.04
CPEB1-216ENST00000618449 HDGFP51858 240 aaKnown RBP15.32■□□□□ 0.04
CPEB1-216ENST00000618449 RALBP1Q15311 655 aa15.32■□□□□ 0.04
CPEB1-216ENST00000618449 NRXN3Q9Y4C0 1643 aa15.31■□□□□ 0.04
CPEB1-216ENST00000618449 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
CPEB1-216ENST00000618449 PARD3Q8TEW0 1356 aa15.3■□□□□ 0.04
CPEB1-216ENST00000618449 SAFB2Q14151 953 aaKnown RBP eCLIP15.3■□□□□ 0.04
CPEB1-216ENST00000618449 CC2D1BQ5T0F9 858 aaKnown RBP15.29■□□□□ 0.04
CPEB1-216ENST00000618449 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
CPEB1-216ENST00000618449 PRAM1Q96QH2 718 aa15.28■□□□□ 0.04
CPEB1-216ENST00000618449 NEFLP07196 543 aa15.28■□□□□ 0.04
CPEB1-216ENST00000618449 FKBP8Q14318 412 aa15.28■□□□□ 0.04
CPEB1-216ENST00000618449 FAM9BQ8IZU0 186 aa15.28■□□□□ 0.04
CPEB1-216ENST00000618449 KNSTRNQ9Y448 316 aa15.28■□□□□ 0.04
CPEB1-216ENST00000618449 TULP4Q9NRJ4 1543 aa15.28■□□□□ 0.04
CPEB1-216ENST00000618449 RIMS1Q86UR5 1692 aaKnown RBP15.27■□□□□ 0.04
CPEB1-216ENST00000618449 EVC2Q86UK5 1308 aa15.27■□□□□ 0.04
CPEB1-216ENST00000618449 LTKP29376 864 aa15.27■□□□□ 0.03
CPEB1-216ENST00000618449 POGKQ9P215 609 aa15.26■□□□□ 0.03
CPEB1-216ENST00000618449 METP08581 1390 aa15.26■□□□□ 0.03
CPEB1-216ENST00000618449 LRPPRCP42704 1394 aaKnown RBP15.26■□□□□ 0.03
CPEB1-216ENST00000618449 BCANQ96GW7 911 aa15.26■□□□□ 0.03
CPEB1-216ENST00000618449 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
CPEB1-216ENST00000618449 ADAMTSL3P82987 1691 aa15.25■□□□□ 0.03
CPEB1-216ENST00000618449 TXNDC2Q86VQ3 553 aa15.25■□□□□ 0.03
CPEB1-216ENST00000618449 TMC1Q8TDI8 760 aa15.24■□□□□ 0.03
CPEB1-216ENST00000618449 MINK1Q8N4C8 1332 aaPredicted RBP15.24■□□□□ 0.03
CPEB1-216ENST00000618449 ABCC11Q96J66 1382 aa15.24■□□□□ 0.03
CPEB1-216ENST00000618449 PUS7Q96PZ0 661 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms