RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 SALL2Q9Y467 1007 aaPredicted RBP18.82■□□□□ 0.6
CBWD1-226ENST00000618061 LMTK2Q8IWU2 1503 aa18.82■□□□□ 0.6
CBWD1-226ENST00000618061 NLRP13Q86W25 1043 aa18.81■□□□□ 0.6
CBWD1-226ENST00000618061 IFT172Q9UG01 1749 aa18.8■□□□□ 0.6
CBWD1-226ENST00000618061 NEO1Q92859 1461 aa18.8■□□□□ 0.6
CBWD1-226ENST00000618061 LRPPRCP42704 1394 aaKnown RBP18.8■□□□□ 0.6
CBWD1-226ENST00000618061 NOS1P29475 1434 aa18.79■□□□□ 0.6
CBWD1-226ENST00000618061 NUTM2DQ5VT03 806 aaPredicted RBP18.79■□□□□ 0.6
CBWD1-226ENST00000618061 STAC3Q96MF2 364 aa18.79■□□□□ 0.6
CBWD1-226ENST00000618061 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
CBWD1-226ENST00000618061 DIP2CQ9Y2E4 1556 aa18.78■□□□□ 0.6
CBWD1-226ENST00000618061 YEATS2Q9ULM3 1422 aa18.78■□□□□ 0.6
CBWD1-226ENST00000618061 ABCC3O15438 1527 aa18.78■□□□□ 0.6
CBWD1-226ENST00000618061 RICTORQ6R327 1708 aa18.77■□□□□ 0.6
CBWD1-226ENST00000618061 MYOM2P54296 1465 aa18.77■□□□□ 0.6
CBWD1-226ENST00000618061 SIGLEC1Q9BZZ2 1709 aa18.77■□□□□ 0.59
CBWD1-226ENST00000618061 KIAA1210Q9ULL0 1709 aa18.77■□□□□ 0.59
CBWD1-226ENST00000618061 NEURL4Q96JN8 1562 aa18.76■□□□□ 0.59
CBWD1-226ENST00000618061 RIMBP3CA6NJZ7 1639 aa18.76■□□□□ 0.59
CBWD1-226ENST00000618061 RIMBP3BA6NNM3 1639 aa18.76■□□□□ 0.59
CBWD1-226ENST00000618061 RIMBP3Q9UFD9 1639 aa18.76■□□□□ 0.59
CBWD1-226ENST00000618061 ADGRB3O60242 1522 aa18.76■□□□□ 0.59
CBWD1-226ENST00000618061 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
CBWD1-226ENST00000618061 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
CBWD1-226ENST00000618061 CAMSAP1Q5T5Y3 1602 aa18.74■□□□□ 0.59
CBWD1-226ENST00000618061 FAM69CQ0P6D2 419 aa18.74■□□□□ 0.59
CBWD1-226ENST00000618061 EIF3AQ14152 1382 aaKnown RBP18.74■□□□□ 0.59
CBWD1-226ENST00000618061 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
CBWD1-226ENST00000618061 MYOM1P52179 1685 aa18.73■□□□□ 0.59
CBWD1-226ENST00000618061 TSPOAP1O95153 1857 aa18.73■□□□□ 0.59
CBWD1-226ENST00000618061 TMEM132EQ6IEE7 984 aa18.72■□□□□ 0.59
CBWD1-226ENST00000618061 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
CBWD1-226ENST00000618061 PPLO60437 1756 aa18.71■□□□□ 0.59
CBWD1-226ENST00000618061 NRXN1Q9ULB1 1477 aa18.7■□□□□ 0.58
CBWD1-226ENST00000618061 CDCA8Q53HL2 280 aa18.7■□□□□ 0.58
CBWD1-226ENST00000618061 SYNMO15061 1565 aa18.7■□□□□ 0.58
CBWD1-226ENST00000618061 AMER1Q5JTC6 1135 aaPredicted RBP18.69■□□□□ 0.58
CBWD1-226ENST00000618061 ERVK-7P63135 1459 aa18.69■□□□□ 0.58
CBWD1-226ENST00000618061 KDM5AP29375 1690 aaKnown RBP18.69■□□□□ 0.58
CBWD1-226ENST00000618061 B4GALNT3Q6L9W6 998 aa18.69■□□□□ 0.58
CBWD1-226ENST00000618061 PPP2R1AP30153 589 aa18.66■□□□□ 0.58
CBWD1-226ENST00000618061 PPP4R2Q9NY27 417 aa18.66■□□□□ 0.58
CBWD1-226ENST00000618061 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
CBWD1-226ENST00000618061 IDI1Q13907 227 aa18.65■□□□□ 0.58
CBWD1-226ENST00000618061 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
CBWD1-226ENST00000618061 CDCA7LQ96GN5 454 aa18.64■□□□□ 0.57
CBWD1-226ENST00000618061 GLI2P10070 1586 aa18.64■□□□□ 0.57
CBWD1-226ENST00000618061 DIP2BQ9P265 1576 aa18.64■□□□□ 0.57
CBWD1-226ENST00000618061 CENPJQ9HC77 1338 aaPredicted RBP18.63■□□□□ 0.57
CBWD1-226ENST00000618061 CARD14Q9BXL6 1004 aa18.63■□□□□ 0.57
CBWD1-226ENST00000618061 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
CBWD1-226ENST00000618061 ASXL1Q8IXJ9 1541 aa18.63■□□□□ 0.57
CBWD1-226ENST00000618061 PIK3C2BO00750 1634 aa18.62■□□□□ 0.57
CBWD1-226ENST00000618061 FBXO31Q5XUX0 539 aaPredicted RBP18.61■□□□□ 0.57
CBWD1-226ENST00000618061 ADGRB1O14514 1584 aa18.61■□□□□ 0.57
CBWD1-226ENST00000618061 MYO5BQ9ULV0 1848 aa18.61■□□□□ 0.57
CBWD1-226ENST00000618061 ERICH6BQ5W0A0 696 aa18.61■□□□□ 0.57
CBWD1-226ENST00000618061 SETBP1Q9Y6X0 1596 aa18.6■□□□□ 0.57
CBWD1-226ENST00000618061 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
CBWD1-226ENST00000618061 QRICH2Q9H0J4 1663 aa18.6■□□□□ 0.57
CBWD1-226ENST00000618061 NEXMIFQ5QGS0 1516 aa18.59■□□□□ 0.57
CBWD1-226ENST00000618061 RPGRIP1LQ68CZ1 1315 aa18.59■□□□□ 0.57
CBWD1-226ENST00000618061 BLMP54132 1417 aaPredicted RBP18.58■□□□□ 0.57
CBWD1-226ENST00000618061 SAFB2Q14151 953 aaKnown RBP eCLIP18.58■□□□□ 0.57
CBWD1-226ENST00000618061 RNF123Q5XPI4 1314 aa18.58■□□□□ 0.57
CBWD1-226ENST00000618061 ZC3H13Q5T200 1668 aaKnown RBP18.58■□□□□ 0.56
CBWD1-226ENST00000618061 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
CBWD1-226ENST00000618061 VGFO15240 615 aaPredicted RBP18.57■□□□□ 0.56
CBWD1-226ENST00000618061 PREX1Q8TCU6 1659 aa18.56■□□□□ 0.56
CBWD1-226ENST00000618061 ARHGAP31Q2M1Z3 1444 aa18.56■□□□□ 0.56
CBWD1-226ENST00000618061 MLECQ14165 292 aa18.56■□□□□ 0.56
CBWD1-226ENST00000618061 WDR43Q15061 677 aaKnown RBP eCLIP18.56■□□□□ 0.56
CBWD1-226ENST00000618061 STK26Q9P289 416 aa18.56■□□□□ 0.56
CBWD1-226ENST00000618061 RBM19Q9Y4C8 960 aaKnown RBP18.56■□□□□ 0.56
CBWD1-226ENST00000618061 ZMYM4Q5VZL5 1548 aa18.54■□□□□ 0.56
CBWD1-226ENST00000618061 SBNO2Q9Y2G9 1366 aa18.53■□□□□ 0.56
CBWD1-226ENST00000618061 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
CBWD1-226ENST00000618061 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
CBWD1-226ENST00000618061 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
CBWD1-226ENST00000618061 TNNT2P45379 298 aaPredicted RBP18.52■□□□□ 0.56
CBWD1-226ENST00000618061 SLC52A1Q9NWF4 448 aa18.52■□□□□ 0.56
CBWD1-226ENST00000618061 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
CBWD1-226ENST00000618061 ARHGEF28Q8N1W1 1705 aaKnown RBP18.51■□□□□ 0.55
CBWD1-226ENST00000618061 NSD3Q9BZ95 1437 aa18.5■□□□□ 0.55
CBWD1-226ENST00000618061 NPC1L1Q9UHC9 1359 aa18.5■□□□□ 0.55
CBWD1-226ENST00000618061 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
CBWD1-226ENST00000618061 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
CBWD1-226ENST00000618061 PLEKHH1Q9ULM0 1364 aa18.49■□□□□ 0.55
CBWD1-226ENST00000618061 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
CBWD1-226ENST00000618061 CLTCQ00610 1675 aaKnown RBP18.48■□□□□ 0.55
CBWD1-226ENST00000618061 PLIN1O60240 522 aa18.47■□□□□ 0.55
CBWD1-226ENST00000618061 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
CBWD1-226ENST00000618061 STAG3Q9UJ98 1225 aa18.47■□□□□ 0.55
CBWD1-226ENST00000618061 TULP4Q9NRJ4 1543 aa18.47■□□□□ 0.55
CBWD1-226ENST00000618061 INSRP06213 1382 aa18.47■□□□□ 0.55
CBWD1-226ENST00000618061 EXOC6Q8TAG9 804 aa18.45■□□□□ 0.54
CBWD1-226ENST00000618061 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
CBWD1-226ENST00000618061 EVC2Q86UK5 1308 aa18.44■□□□□ 0.54
CBWD1-226ENST00000618061 KIF13AQ9H1H9 1805 aa18.44■□□□□ 0.54
CBWD1-226ENST00000618061 MINK1Q8N4C8 1332 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms