RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 TNNT1P13805 278 aa9.1□□□□□ -0.95
PDE6A-205ENST00000617647 FOXD4L5Q5VV16 416 aaPredicted RBP9.1□□□□□ -0.95
PDE6A-205ENST00000617647 FOXD4L4Q8WXT5 416 aaPredicted RBP9.1□□□□□ -0.95
PDE6A-205ENST00000617647 RALBP1Q15311 655 aa9.1□□□□□ -0.95
PDE6A-205ENST00000617647 ZNF592Q92610 1267 aa9.09□□□□□ -0.95
PDE6A-205ENST00000617647 TNPO1Q92973 898 aaKnown RBP9.09□□□□□ -0.95
PDE6A-205ENST00000617647 U2AF2P26368 475 aaKnown RBP eCLIP9.09□□□□□ -0.95
PDE6A-205ENST00000617647 MYBBP1AQ9BQG0 1328 aaKnown RBP9.09□□□□□ -0.95
PDE6A-205ENST00000617647 PMFBP1Q8TBY8 1022 aa9.09□□□□□ -0.95
PDE6A-205ENST00000617647 NOL7Q9UMY1 257 aaKnown RBP9.09□□□□□ -0.95
PDE6A-205ENST00000617647 KDM2AQ9Y2K7 1162 aa9.09□□□□□ -0.95
PDE6A-205ENST00000617647 RRBP1Q9P2E9 1410 aaKnown RBP9.09□□□□□ -0.95
PDE6A-205ENST00000617647 MCM5P33992 734 aa9.08□□□□□ -0.96
PDE6A-205ENST00000617647 GAS2L3Q86XJ1 694 aa9.08□□□□□ -0.96
PDE6A-205ENST00000617647 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
PDE6A-205ENST00000617647 NLRP13Q86W25 1043 aa9.08□□□□□ -0.96
PDE6A-205ENST00000617647 RWDD1Q9H446 243 aaPredicted RBP9.08□□□□□ -0.96
PDE6A-205ENST00000617647 SEC24BO95487 1268 aa9.08□□□□□ -0.96
PDE6A-205ENST00000617647 SYAP1Q96A49 352 aaPredicted RBP9.08□□□□□ -0.96
PDE6A-205ENST00000617647 COG6Q9Y2V7 657 aa9.08□□□□□ -0.96
PDE6A-205ENST00000617647 MAPKBP1O60336 1514 aa9.08□□□□□ -0.96
PDE6A-205ENST00000617647 IRX5P78411 483 aaPredicted RBP9.08□□□□□ -0.96
PDE6A-205ENST00000617647 PANK3Q9H999 370 aa9.08□□□□□ -0.96
PDE6A-205ENST00000617647 GOLGA2Q08379 1002 aa9.07□□□□□ -0.96
PDE6A-205ENST00000617647 LMOD3Q0VAK6 560 aa9.07□□□□□ -0.96
PDE6A-205ENST00000617647 TEX35Q5T0J7 233 aa9.07□□□□□ -0.96
PDE6A-205ENST00000617647 TMX1Q9H3N1 280 aa9.07□□□□□ -0.96
PDE6A-205ENST00000617647 TOMM22Q9NS69 142 aa9.07□□□□□ -0.96
PDE6A-205ENST00000617647 C14orf37Q86TY3 774 aa9.07□□□□□ -0.96
PDE6A-205ENST00000617647 CHMP4CQ96CF2 233 aa9.07□□□□□ -0.96
PDE6A-205ENST00000617647 CARD11Q9BXL7 1154 aa9.07□□□□□ -0.96
PDE6A-205ENST00000617647 TAOK2Q9UL54 1235 aa9.07□□□□□ -0.96
PDE6A-205ENST00000617647 HS1BP3Q53T59 392 aa9.06□□□□□ -0.96
PDE6A-205ENST00000617647 MYRIPQ8NFW9 859 aa9.06□□□□□ -0.96
PDE6A-205ENST00000617647 ARHGAP35Q9NRY4 1499 aa9.06□□□□□ -0.96
PDE6A-205ENST00000617647 RBM25P49756 843 aaKnown RBP9.05□□□□□ -0.96
PDE6A-205ENST00000617647 CFAP43Q8NDM7 1665 aa9.05□□□□□ -0.96
PDE6A-205ENST00000617647 PRPF40AO75400 957 aaKnown RBP9.05□□□□□ -0.96
PDE6A-205ENST00000617647 U2SURPO15042 1029 aaKnown RBP9.05□□□□□ -0.96
PDE6A-205ENST00000617647 HTATSF1O43719 755 aaKnown RBP9.05□□□□□ -0.96
PDE6A-205ENST00000617647 GTF2F1P35269 517 aaKnown RBP eCLIP9.05□□□□□ -0.96
PDE6A-205ENST00000617647 NOM1Q5C9Z4 860 aaKnown RBP9.05□□□□□ -0.96
PDE6A-205ENST00000617647 AXDND1Q5T1B0 1012 aaPredicted RBP9.05□□□□□ -0.96
PDE6A-205ENST00000617647 PPP1R9BQ96SB3 815 aa9.05□□□□□ -0.96
PDE6A-205ENST00000617647 CADPSQ9ULU8 1353 aa9.05□□□□□ -0.96
PDE6A-205ENST00000617647 ZNF500O60304 480 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-205ENST00000617647 NEUROD2Q15784 382 aa9.04□□□□□ -0.96
PDE6A-205ENST00000617647 ATP2B3Q16720 1220 aa9.04□□□□□ -0.96
PDE6A-205ENST00000617647 BANK1Q8NDB2 785 aa9.04□□□□□ -0.96
PDE6A-205ENST00000617647 ZNF526Q8TF50 670 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-205ENST00000617647 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
PDE6A-205ENST00000617647 TBC1D32Q96NH3 1257 aa9.04□□□□□ -0.96
PDE6A-205ENST00000617647 KIF15Q9NS87 1388 aa9.04□□□□□ -0.96
PDE6A-205ENST00000617647 HOXD11P31277 338 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-205ENST00000617647 FOXD4L6Q3SYB3 417 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-205ENST00000617647 FOXD4L3Q6VB84 417 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-205ENST00000617647 DEF6Q9H4E7 631 aa9.04□□□□□ -0.96
PDE6A-205ENST00000617647 OGFRQ9NZT2 677 aa9.04□□□□□ -0.96
PDE6A-205ENST00000617647 BCCIPQ9P287 314 aaKnown RBP eCLIP9.04□□□□□ -0.96
PDE6A-205ENST00000617647 CARMIL1Q5VZK9 1371 aa9.04□□□□□ -0.96
PDE6A-205ENST00000617647 CGNL1Q0VF96 1302 aa9.03□□□□□ -0.96
PDE6A-205ENST00000617647 GPS2Q13227 327 aa9.03□□□□□ -0.96
PDE6A-205ENST00000617647 RGS22Q8NE09 1264 aa9.03□□□□□ -0.96
PDE6A-205ENST00000617647 FGD5Q6ZNL6 1462 aa9.03□□□□□ -0.96
PDE6A-205ENST00000617647 NPHP1O15259 732 aa9.03□□□□□ -0.96
PDE6A-205ENST00000617647 SYCE3A1L190 88 aa9.03□□□□□ -0.96
PDE6A-205ENST00000617647 CWC15Q9P013 229 aaKnown RBP9.03□□□□□ -0.96
PDE6A-205ENST00000617647 PHF14O94880 888 aa9.02□□□□□ -0.96
PDE6A-205ENST00000617647 MYCNP04198 464 aaPredicted RBP9.02□□□□□ -0.96
PDE6A-205ENST00000617647 JARID2Q92833 1246 aaPredicted RBP9.02□□□□□ -0.96
PDE6A-205ENST00000617647 FEZ1Q99689 392 aa9.02□□□□□ -0.96
PDE6A-205ENST00000617647 IFT57Q9NWB7 429 aa9.02□□□□□ -0.96
PDE6A-205ENST00000617647 CIZ1Q9ULV3 898 aaPredicted RBP9.02□□□□□ -0.96
PDE6A-205ENST00000617647 GABPB1Q06547 395 aaPredicted RBP9.02□□□□□ -0.97
PDE6A-205ENST00000617647 NOLC1Q14978 699 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDE6A-205ENST00000617647 SSFA2P28290 1259 aa9.02□□□□□ -0.97
PDE6A-205ENST00000617647 SRPK2P78362 688 aaKnown RBP9.02□□□□□ -0.97
PDE6A-205ENST00000617647 HOMEZQ8IX15 550 aa9.02□□□□□ -0.97
PDE6A-205ENST00000617647 TSPY26PQ9H489 355 aa9.02□□□□□ -0.97
PDE6A-205ENST00000617647 BCL2L12Q9HB09 334 aa9.02□□□□□ -0.97
PDE6A-205ENST00000617647 RSPH14Q9UHP6 348 aa9.02□□□□□ -0.97
PDE6A-205ENST00000617647 MAP3K1Q13233 1512 aa9.01□□□□□ -0.97
PDE6A-205ENST00000617647 KRT222Q8N1A0 295 aa9.01□□□□□ -0.97
PDE6A-205ENST00000617647 ANTXR1Q9H6X2 564 aa9.01□□□□□ -0.97
PDE6A-205ENST00000617647 PDZRN3Q9UPQ7 1066 aa9.01□□□□□ -0.97
PDE6A-205ENST00000617647 KLHL40Q2TBA0 621 aa9.01□□□□□ -0.97
PDE6A-205ENST00000617647 ZNF622Q969S3 477 aaKnown RBP eCLIP9.01□□□□□ -0.97
PDE6A-205ENST00000617647 TIAM1Q13009 1591 aa9.01□□□□□ -0.97
PDE6A-205ENST00000617647 IGF1RP08069 1367 aa9.01□□□□□ -0.97
PDE6A-205ENST00000617647 NUCB2P80303 420 aa9.01□□□□□ -0.97
PDE6A-205ENST00000617647 PANK1Q8TE04 598 aa9.01□□□□□ -0.97
PDE6A-205ENST00000617647 ZSCAN23Q3MJ62 389 aa9□□□□□ -0.97
PDE6A-205ENST00000617647 CCDC112Q8NEF3 446 aa9□□□□□ -0.97
PDE6A-205ENST00000617647 RASSF4Q9H2L5 321 aa9□□□□□ -0.97
PDE6A-205ENST00000617647 CALRP27797 417 aaKnown RBP9□□□□□ -0.97
PDE6A-205ENST00000617647 C10orf67Q8IYJ2 551 aa9□□□□□ -0.97
PDE6A-205ENST00000617647 BRD4O60885 1362 aaPredicted RBP9□□□□□ -0.97
PDE6A-205ENST00000617647 SPC24Q8NBT2 197 aa9□□□□□ -0.97
PDE6A-205ENST00000617647 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9□□□□□ -0.97
PDE6A-205ENST00000617647 RBM27Q9P2N5 1060 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms