RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 APLP2Q06481 763 aa18.83■□□□□ 0.6
COL4A2-210ENST00000617564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL4A2-210ENST00000617564 PROSER2Q86WR7 435 aaPredicted RBP18.8■□□□□ 0.6
COL4A2-210ENST00000617564 RBM33Q96EV2 1170 aaKnown RBP18.8■□□□□ 0.6
COL4A2-210ENST00000617564 STAG3Q9UJ98 1225 aa18.8■□□□□ 0.6
COL4A2-210ENST00000617564 SLAIN2Q9P270 581 aa18.79■□□□□ 0.6
COL4A2-210ENST00000617564 NOS1P29475 1434 aa18.79■□□□□ 0.6
COL4A2-210ENST00000617564 ADGRB3O60242 1522 aa18.79■□□□□ 0.6
COL4A2-210ENST00000617564 COL16A1Q07092 1604 aaPredicted RBP18.78■□□□□ 0.6
COL4A2-210ENST00000617564 ADGRL2O95490 1459 aa18.78■□□□□ 0.6
COL4A2-210ENST00000617564 ZRANB1Q9UGI0 708 aa18.78■□□□□ 0.6
COL4A2-210ENST00000617564 KCNA6P17658 529 aa18.77■□□□□ 0.6
COL4A2-210ENST00000617564 IDI1Q13907 227 aa18.77■□□□□ 0.6
COL4A2-210ENST00000617564 TET3O43151 1660 aa18.76■□□□□ 0.59
COL4A2-210ENST00000617564 MSH6P52701 1360 aa18.76■□□□□ 0.59
COL4A2-210ENST00000617564 NKTRP30414 1462 aaKnown RBP18.75■□□□□ 0.59
COL4A2-210ENST00000617564 NWD1Q149M9 1564 aa18.75■□□□□ 0.59
COL4A2-210ENST00000617564 RPRD2Q5VT52 1461 aaKnown RBP18.74■□□□□ 0.59
COL4A2-210ENST00000617564 NUTM2BA6NNL0 878 aaPredicted RBP18.73■□□□□ 0.59
COL4A2-210ENST00000617564 NUTM2EB1AL46 878 aaPredicted RBP18.73■□□□□ 0.59
COL4A2-210ENST00000617564 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
COL4A2-210ENST00000617564 NUTM2AQ8IVF1 878 aaPredicted RBP18.73■□□□□ 0.59
COL4A2-210ENST00000617564 SLC52A1Q9NWF4 448 aa18.73■□□□□ 0.59
COL4A2-210ENST00000617564 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
COL4A2-210ENST00000617564 RGS12O14924 1447 aa18.72■□□□□ 0.59
COL4A2-210ENST00000617564 SETBP1Q9Y6X0 1596 aa18.72■□□□□ 0.59
COL4A2-210ENST00000617564 AFF2P51816 1311 aa18.7■□□□□ 0.58
COL4A2-210ENST00000617564 SHPRHQ149N8 1683 aa18.69■□□□□ 0.58
COL4A2-210ENST00000617564 ANKRD50Q9ULJ7 1429 aa18.69■□□□□ 0.58
COL4A2-210ENST00000617564 SLC26A8Q96RN1 970 aa18.69■□□□□ 0.58
COL4A2-210ENST00000617564 ZFYVE9O95405 1425 aa18.67■□□□□ 0.58
COL4A2-210ENST00000617564 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
COL4A2-210ENST00000617564 RBM6P78332 1123 aaKnown RBP18.66■□□□□ 0.58
COL4A2-210ENST00000617564 ATAD2Q6PL18 1390 aa18.65■□□□□ 0.58
COL4A2-210ENST00000617564 QTRT2Q9H974 415 aaKnown RBP18.64■□□□□ 0.57
COL4A2-210ENST00000617564 RIMS2Q9UQ26 1411 aa18.63■□□□□ 0.57
COL4A2-210ENST00000617564 UNC13BO14795 1591 aa18.63■□□□□ 0.57
COL4A2-210ENST00000617564 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
COL4A2-210ENST00000617564 AHDC1Q5TGY3 1603 aaPredicted RBP18.63■□□□□ 0.57
COL4A2-210ENST00000617564 GCC2Q8IWJ2 1684 aa18.63■□□□□ 0.57
COL4A2-210ENST00000617564 HDGFP51858 240 aaKnown RBP18.62■□□□□ 0.57
COL4A2-210ENST00000617564 FAM50AQ14320 339 aaKnown RBP18.62■□□□□ 0.57
COL4A2-210ENST00000617564 NCOA3Q9Y6Q9 1424 aa18.61■□□□□ 0.57
COL4A2-210ENST00000617564 BCANQ96GW7 911 aa18.61■□□□□ 0.57
COL4A2-210ENST00000617564 CHD2O14647 1828 aaKnown RBP18.6■□□□□ 0.57
COL4A2-210ENST00000617564 MYO5BQ9ULV0 1848 aa18.59■□□□□ 0.57
COL4A2-210ENST00000617564 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
COL4A2-210ENST00000617564 DIP2AQ14689 1571 aa18.59■□□□□ 0.57
COL4A2-210ENST00000617564 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.58■□□□□ 0.56
COL4A2-210ENST00000617564 NGLY1Q96IV0 654 aa18.57■□□□□ 0.56
COL4A2-210ENST00000617564 C8orf37Q96NL8 207 aa18.57■□□□□ 0.56
COL4A2-210ENST00000617564 TBX22Q9Y458 520 aa18.57■□□□□ 0.56
COL4A2-210ENST00000617564 ROCK1Q13464 1354 aa18.56■□□□□ 0.56
COL4A2-210ENST00000617564 PIK3R4Q99570 1358 aa18.55■□□□□ 0.56
COL4A2-210ENST00000617564 IQGAP3Q86VI3 1631 aa18.55■□□□□ 0.56
COL4A2-210ENST00000617564 E9PCH4 1651 aa18.54■□□□□ 0.56
COL4A2-210ENST00000617564 ADAMTS13Q76LX8 1427 aa18.54■□□□□ 0.56
COL4A2-210ENST00000617564 C14orf37Q86TY3 774 aa18.53■□□□□ 0.56
COL4A2-210ENST00000617564 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
COL4A2-210ENST00000617564 CCDC125Q86Z20 511 aa18.51■□□□□ 0.55
COL4A2-210ENST00000617564 EP400Q96L91 3159 aa18.5■□□□□ 0.55
COL4A2-210ENST00000617564 TRPM2O94759 1503 aa18.5■□□□□ 0.55
COL4A2-210ENST00000617564 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
COL4A2-210ENST00000617564 ATF3P18847 181 aa18.5■□□□□ 0.55
COL4A2-210ENST00000617564 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.47■□□□□ 0.55
COL4A2-210ENST00000617564 BRINP3Q76B58 766 aa18.47■□□□□ 0.55
COL4A2-210ENST00000617564 C19orf44Q9H6X5 657 aa18.47■□□□□ 0.55
COL4A2-210ENST00000617564 LRP5O75197 1615 aa18.47■□□□□ 0.55
COL4A2-210ENST00000617564 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
COL4A2-210ENST00000617564 DCCP43146 1447 aa18.46■□□□□ 0.55
COL4A2-210ENST00000617564 NUP155O75694 1391 aa18.45■□□□□ 0.54
COL4A2-210ENST00000617564 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
COL4A2-210ENST00000617564 PTPRUQ92729 1446 aa18.42■□□□□ 0.54
COL4A2-210ENST00000617564 XRN1Q8IZH2 1706 aaKnown RBP18.42■□□□□ 0.54
COL4A2-210ENST00000617564 TRPC5Q9UL62 973 aaPredicted RBP18.41■□□□□ 0.54
COL4A2-210ENST00000617564 AMOTL2Q9Y2J4 779 aa18.41■□□□□ 0.54
COL4A2-210ENST00000617564 NRXN3Q9Y4C0 1643 aa18.41■□□□□ 0.54
COL4A2-210ENST00000617564 ADAMTS2O95450 1211 aa18.4■□□□□ 0.54
COL4A2-210ENST00000617564 USP21Q9UK80 565 aa18.4■□□□□ 0.54
COL4A2-210ENST00000617564 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
COL4A2-210ENST00000617564 ASXL1Q8IXJ9 1541 aa18.39■□□□□ 0.54
COL4A2-210ENST00000617564 PNPLA6Q8IY17 1366 aa18.39■□□□□ 0.53
COL4A2-210ENST00000617564 NHSL1Q5SYE7 1610 aa18.36■□□□□ 0.53
COL4A2-210ENST00000617564 MST1RQ04912 1400 aa18.35■□□□□ 0.53
COL4A2-210ENST00000617564 ATRNO75882 1429 aa18.33■□□□□ 0.53
COL4A2-210ENST00000617564 BLMP54132 1417 aaPredicted RBP18.33■□□□□ 0.53
COL4A2-210ENST00000617564 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
COL4A2-210ENST00000617564 ITGAEP38570 1179 aa18.32■□□□□ 0.52
COL4A2-210ENST00000617564 DEFB132Q7Z7B7 95 aa18.32■□□□□ 0.52
COL4A2-210ENST00000617564 NEXMIFQ5QGS0 1516 aa18.32■□□□□ 0.52
COL4A2-210ENST00000617564 METP08581 1390 aa18.31■□□□□ 0.52
COL4A2-210ENST00000617564 YY1P25490 414 aa18.31■□□□□ 0.52
COL4A2-210ENST00000617564 ZNF326Q5BKZ1 582 aaKnown RBP18.31■□□□□ 0.52
COL4A2-210ENST00000617564 FNBP4Q8N3X1 1017 aaPredicted RBP18.31■□□□□ 0.52
COL4A2-210ENST00000617564 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
COL4A2-210ENST00000617564 CLTCL1P53675 1640 aa18.3■□□□□ 0.52
COL4A2-210ENST00000617564 SF3B2Q13435 895 aaKnown RBP18.29■□□□□ 0.52
COL4A2-210ENST00000617564 NALCNQ8IZF0 1738 aa18.27■□□□□ 0.52
COL4A2-210ENST00000617564 PTCH1Q13635 1447 aa18.27■□□□□ 0.52
COL4A2-210ENST00000617564 HRCP23327 699 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms