RNA–Protein interactions for RNA: ENST00000617462.4

CPEB1-213, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-213ENST00000617462 PIK3C2BO00750 1634 aa19.08■□□□□ 0.64
CPEB1-213ENST00000617462 ZC3H13Q5T200 1668 aaKnown RBP19.07■□□□□ 0.64
CPEB1-213ENST00000617462 KIAA1210Q9ULL0 1709 aa19.06■□□□□ 0.64
CPEB1-213ENST00000617462 MYO5BQ9ULV0 1848 aa19.05■□□□□ 0.64
CPEB1-213ENST00000617462 NRXN1Q9ULB1 1477 aa19.05■□□□□ 0.64
CPEB1-213ENST00000617462 PREX1Q8TCU6 1659 aa19.04■□□□□ 0.64
CPEB1-213ENST00000617462 SCAF11Q99590 1463 aaKnown RBP19.03■□□□□ 0.64
CPEB1-213ENST00000617462 NUTM2DQ5VT03 806 aaPredicted RBP19.02■□□□□ 0.64
CPEB1-213ENST00000617462 ARHGAP31Q2M1Z3 1444 aa19.02■□□□□ 0.64
CPEB1-213ENST00000617462 FBXO31Q5XUX0 539 aaPredicted RBP19.01■□□□□ 0.63
CPEB1-213ENST00000617462 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
CPEB1-213ENST00000617462 REREQ9P2R6 1566 aa19■□□□□ 0.63
CPEB1-213ENST00000617462 IDI1Q13907 227 aa18.99■□□□□ 0.63
CPEB1-213ENST00000617462 STAC3Q96MF2 364 aa18.99■□□□□ 0.63
CPEB1-213ENST00000617462 CLTCQ00610 1675 aaKnown RBP18.99■□□□□ 0.63
CPEB1-213ENST00000617462 NEXMIFQ5QGS0 1516 aa18.98■□□□□ 0.63
CPEB1-213ENST00000617462 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
CPEB1-213ENST00000617462 PIK3C2GO75747 1445 aa18.98■□□□□ 0.63
CPEB1-213ENST00000617462 ARHGEF40Q8TER5 1519 aa18.98■□□□□ 0.63
CPEB1-213ENST00000617462 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
CPEB1-213ENST00000617462 PER1O15534 1290 aaPredicted RBP18.97■□□□□ 0.63
CPEB1-213ENST00000617462 HNRNPUQ00839 825 aaKnown RBP eCLIP18.97■□□□□ 0.63
CPEB1-213ENST00000617462 MLECQ14165 292 aa18.97■□□□□ 0.63
CPEB1-213ENST00000617462 AGLP35573 1532 aa18.97■□□□□ 0.63
CPEB1-213ENST00000617462 TMF1P82094 1093 aa18.96■□□□□ 0.63
CPEB1-213ENST00000617462 MYOM1P52179 1685 aa18.94■□□□□ 0.62
CPEB1-213ENST00000617462 ADGRB1O14514 1584 aa18.94■□□□□ 0.62
CPEB1-213ENST00000617462 TMEM131LA2VDJ0 1609 aa18.94■□□□□ 0.62
CPEB1-213ENST00000617462 TMEM132EQ6IEE7 984 aa18.93■□□□□ 0.62
CPEB1-213ENST00000617462 PANK3Q9H999 370 aa18.93■□□□□ 0.62
CPEB1-213ENST00000617462 ERVK-7P63135 1459 aa18.92■□□□□ 0.62
CPEB1-213ENST00000617462 C14orf93Q9H972 538 aaKnown RBP18.91■□□□□ 0.62
CPEB1-213ENST00000617462 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
CPEB1-213ENST00000617462 MYO3AQ8NEV4 1616 aa18.89■□□□□ 0.62
CPEB1-213ENST00000617462 SENP3-EIF4A1A0A087X0R7 540 aa18.88■□□□□ 0.61
CPEB1-213ENST00000617462 TRAK1Q9UPV9 953 aa18.88■□□□□ 0.61
CPEB1-213ENST00000617462 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
CPEB1-213ENST00000617462 CC2D1BQ5T0F9 858 aaKnown RBP18.88■□□□□ 0.61
CPEB1-213ENST00000617462 EIF3AQ14152 1382 aaKnown RBP18.87■□□□□ 0.61
CPEB1-213ENST00000617462 PARD3Q8TEW0 1356 aa18.87■□□□□ 0.61
CPEB1-213ENST00000617462 SLC52A1Q9NWF4 448 aa18.87■□□□□ 0.61
CPEB1-213ENST00000617462 KDM5AP29375 1690 aaKnown RBP18.87■□□□□ 0.61
CPEB1-213ENST00000617462 QRICH2Q9H0J4 1663 aa18.86■□□□□ 0.61
CPEB1-213ENST00000617462 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
CPEB1-213ENST00000617462 MYBBP1AQ9BQG0 1328 aaKnown RBP18.84■□□□□ 0.61
CPEB1-213ENST00000617462 SPATA31D1Q6ZQQ2 1576 aa18.84■□□□□ 0.61
CPEB1-213ENST00000617462 ARHGEF28Q8N1W1 1705 aaKnown RBP18.83■□□□□ 0.61
CPEB1-213ENST00000617462 SUPT16HQ9Y5B9 1047 aaKnown RBP18.83■□□□□ 0.61
CPEB1-213ENST00000617462 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
CPEB1-213ENST00000617462 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
CPEB1-213ENST00000617462 RALBP1Q15311 655 aa18.82■□□□□ 0.6
CPEB1-213ENST00000617462 VGFO15240 615 aaPredicted RBP18.81■□□□□ 0.6
CPEB1-213ENST00000617462 CENPJQ9HC77 1338 aaPredicted RBP18.81■□□□□ 0.6
CPEB1-213ENST00000617462 TMC1Q8TDI8 760 aa18.8■□□□□ 0.6
CPEB1-213ENST00000617462 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
CPEB1-213ENST00000617462 ZFYVE9O95405 1425 aa18.79■□□□□ 0.6
CPEB1-213ENST00000617462 BRD4O60885 1362 aaPredicted RBP18.78■□□□□ 0.6
CPEB1-213ENST00000617462 A2ML1A8K2U0 1454 aa18.78■□□□□ 0.6
CPEB1-213ENST00000617462 ZMYM3Q14202 1370 aa18.77■□□□□ 0.6
CPEB1-213ENST00000617462 AMER1Q5JTC6 1135 aaPredicted RBP18.77■□□□□ 0.6
CPEB1-213ENST00000617462 SBNO2Q9Y2G9 1366 aa18.77■□□□□ 0.6
CPEB1-213ENST00000617462 LRPPRCP42704 1394 aaKnown RBP18.76■□□□□ 0.59
CPEB1-213ENST00000617462 ZBED9Q6R2W3 1325 aa18.76■□□□□ 0.59
CPEB1-213ENST00000617462 CDCA8Q53HL2 280 aa18.75■□□□□ 0.59
CPEB1-213ENST00000617462 CARD14Q9BXL6 1004 aa18.75■□□□□ 0.59
CPEB1-213ENST00000617462 STK26Q9P289 416 aa18.75■□□□□ 0.59
CPEB1-213ENST00000617462 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
CPEB1-213ENST00000617462 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
CPEB1-213ENST00000617462 TULP4Q9NRJ4 1543 aa18.74■□□□□ 0.59
CPEB1-213ENST00000617462 ALKQ9UM73 1620 aa18.73■□□□□ 0.59
CPEB1-213ENST00000617462 STAG3Q9UJ98 1225 aa18.73■□□□□ 0.59
CPEB1-213ENST00000617462 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
CPEB1-213ENST00000617462 PTPRMP28827 1452 aa18.72■□□□□ 0.59
CPEB1-213ENST00000617462 FKBP8Q14318 412 aa18.72■□□□□ 0.59
CPEB1-213ENST00000617462 SETD1AO15047 1707 aaKnown RBP18.72■□□□□ 0.59
CPEB1-213ENST00000617462 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
CPEB1-213ENST00000617462 BCANQ96GW7 911 aa18.7■□□□□ 0.58
CPEB1-213ENST00000617462 RIMS2Q9UQ26 1411 aa18.7■□□□□ 0.58
CPEB1-213ENST00000617462 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
CPEB1-213ENST00000617462 NRXN3Q9Y4C0 1643 aa18.69■□□□□ 0.58
CPEB1-213ENST00000617462 CEBPAP49715 358 aaPredicted RBP18.68■□□□□ 0.58
CPEB1-213ENST00000617462 ESF1Q9H501 851 aaKnown RBP18.68■□□□□ 0.58
CPEB1-213ENST00000617462 YTHDC2Q9H6S0 1430 aaKnown RBP18.68■□□□□ 0.58
CPEB1-213ENST00000617462 PPP2R1AP30153 589 aa18.67■□□□□ 0.58
CPEB1-213ENST00000617462 CABP2Q9NPB3 220 aa18.65■□□□□ 0.58
CPEB1-213ENST00000617462 UBR1Q8IWV7 1749 aa18.65■□□□□ 0.58
CPEB1-213ENST00000617462 TNRQ92752 1358 aa18.65■□□□□ 0.58
CPEB1-213ENST00000617462 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.57
CPEB1-213ENST00000617462 PRAM1Q96QH2 718 aa18.64■□□□□ 0.57
CPEB1-213ENST00000617462 NSD3Q9BZ95 1437 aa18.63■□□□□ 0.57
CPEB1-213ENST00000617462 MINK1Q8N4C8 1332 aaPredicted RBP18.63■□□□□ 0.57
CPEB1-213ENST00000617462 PLPPR3Q6T4P5 718 aa18.62■□□□□ 0.57
CPEB1-213ENST00000617462 C3P01024 1663 aa18.62■□□□□ 0.57
CPEB1-213ENST00000617462 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
CPEB1-213ENST00000617462 SALL2Q9Y467 1007 aaPredicted RBP18.62■□□□□ 0.57
CPEB1-213ENST00000617462 NPC1L1Q9UHC9 1359 aa18.61■□□□□ 0.57
CPEB1-213ENST00000617462 PLEKHH1Q9ULM0 1364 aa18.61■□□□□ 0.57
CPEB1-213ENST00000617462 EVC2Q86UK5 1308 aa18.6■□□□□ 0.57
CPEB1-213ENST00000617462 FER1L4A9Z1Z3 1794 aa18.6■□□□□ 0.57
CPEB1-213ENST00000617462 METP08581 1390 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms