RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 MAP7D2Q96T17 732 aa19.45■□□□□ 0.7
SYNRG-223ENST00000616179 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
SYNRG-223ENST00000616179 DZIP1LQ8IYY4 767 aaKnown RBP19.44■□□□□ 0.7
SYNRG-223ENST00000616179 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
SYNRG-223ENST00000616179 GAS2L3Q86XJ1 694 aa19.43■□□□□ 0.7
SYNRG-223ENST00000616179 EIF3AQ14152 1382 aaKnown RBP19.43■□□□□ 0.7
SYNRG-223ENST00000616179 SSFA2P28290 1259 aa19.43■□□□□ 0.7
SYNRG-223ENST00000616179 FSD2A1L4K1 749 aa19.42■□□□□ 0.7
SYNRG-223ENST00000616179 PRPF40AO75400 957 aaKnown RBP19.42■□□□□ 0.7
SYNRG-223ENST00000616179 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
SYNRG-223ENST00000616179 ISY1Q9ULR0 285 aaKnown RBP19.41■□□□□ 0.7
SYNRG-223ENST00000616179 USP19O94966 1318 aa19.41■□□□□ 0.7
SYNRG-223ENST00000616179 CBX1P83916 185 aa19.41■□□□□ 0.7
SYNRG-223ENST00000616179 ANTXR1Q9H6X2 564 aa19.41■□□□□ 0.7
SYNRG-223ENST00000616179 DAPK1P53355 1430 aa19.41■□□□□ 0.7
SYNRG-223ENST00000616179 PER1O15534 1290 aaPredicted RBP19.41■□□□□ 0.7
SYNRG-223ENST00000616179 PARD3Q8TEW0 1356 aa19.4■□□□□ 0.7
SYNRG-223ENST00000616179 CCDC144AA2RUR9 1427 aa19.4■□□□□ 0.7
SYNRG-223ENST00000616179 KDM5BQ9UGL1 1544 aa19.39■□□□□ 0.7
SYNRG-223ENST00000616179 ANKRD50Q9ULJ7 1429 aa19.38■□□□□ 0.69
SYNRG-223ENST00000616179 TCP11L2Q8N4U5 519 aa19.38■□□□□ 0.69
SYNRG-223ENST00000616179 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
SYNRG-223ENST00000616179 CHAF1AQ13111 956 aaPredicted RBP19.37■□□□□ 0.69
SYNRG-223ENST00000616179 CSPP1Q1MSJ5 1256 aa19.37■□□□□ 0.69
SYNRG-223ENST00000616179 TEX14Q8IWB6 1497 aa19.37■□□□□ 0.69
SYNRG-223ENST00000616179 SUPT6HQ7KZ85 1726 aaKnown RBP19.37■□□□□ 0.69
SYNRG-223ENST00000616179 RLBP1P12271 317 aa19.37■□□□□ 0.69
SYNRG-223ENST00000616179 TSR2Q969E8 191 aaKnown RBP19.37■□□□□ 0.69
SYNRG-223ENST00000616179 EHBP1L1Q8N3D4 1523 aa19.36■□□□□ 0.69
SYNRG-223ENST00000616179 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
SYNRG-223ENST00000616179 WWC1Q8IX03 1113 aa19.36■□□□□ 0.69
SYNRG-223ENST00000616179 DISP3Q9P2K9 1392 aa19.36■□□□□ 0.69
SYNRG-223ENST00000616179 OFD1O75665 1012 aa19.35■□□□□ 0.69
SYNRG-223ENST00000616179 ZNF771Q7L3S4 317 aaPredicted RBP19.35■□□□□ 0.69
SYNRG-223ENST00000616179 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
SYNRG-223ENST00000616179 ABCC5O15440 1437 aa19.35■□□□□ 0.69
SYNRG-223ENST00000616179 RBM42Q9BTD8 480 aaKnown RBP19.34■□□□□ 0.69
SYNRG-223ENST00000616179 CDK13Q14004 1512 aaKnown RBP19.34■□□□□ 0.69
SYNRG-223ENST00000616179 RARSP54136 660 aaKnown RBP19.34■□□□□ 0.69
SYNRG-223ENST00000616179 SLC24A1O60721 1099 aa19.33■□□□□ 0.69
SYNRG-223ENST00000616179 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
SYNRG-223ENST00000616179 IGSF3O75054 1194 aa19.33■□□□□ 0.68
SYNRG-223ENST00000616179 C1orf115Q9H7X2 142 aa19.33■□□□□ 0.68
SYNRG-223ENST00000616179 FAM177BA6PVY3 158 aa19.32■□□□□ 0.68
SYNRG-223ENST00000616179 KDM6BO15054 1643 aa19.32■□□□□ 0.68
SYNRG-223ENST00000616179 RBM27Q9P2N5 1060 aaKnown RBP19.32■□□□□ 0.68
SYNRG-223ENST00000616179 CFAP43Q8NDM7 1665 aa19.32■□□□□ 0.68
SYNRG-223ENST00000616179 K7ELQ4 463 aaPredicted RBP19.32■□□□□ 0.68
SYNRG-223ENST00000616179 SAFB2Q14151 953 aaKnown RBP eCLIP19.31■□□□□ 0.68
SYNRG-223ENST00000616179 CASC1Q6TDU7 716 aa19.31■□□□□ 0.68
SYNRG-223ENST00000616179 DDX19BQ9UMR2 479 aa19.31■□□□□ 0.68
SYNRG-223ENST00000616179 SYCE3A1L190 88 aa19.3■□□□□ 0.68
SYNRG-223ENST00000616179 MVPQ14764 893 aaKnown RBP19.3■□□□□ 0.68
SYNRG-223ENST00000616179 MTERF4Q7Z6M4 381 aaKnown RBP19.3■□□□□ 0.68
SYNRG-223ENST00000616179 IPO8O15397 1037 aaKnown RBP19.3■□□□□ 0.68
SYNRG-223ENST00000616179 TSC1Q92574 1164 aa19.29■□□□□ 0.68
SYNRG-223ENST00000616179 CCDC39Q9UFE4 941 aa19.29■□□□□ 0.68
SYNRG-223ENST00000616179 SPDYE4A6NLX3 237 aa19.28■□□□□ 0.68
SYNRG-223ENST00000616179 ERBINQ96RT1 1412 aa19.28■□□□□ 0.68
SYNRG-223ENST00000616179 RUNDC1Q96C34 613 aa19.28■□□□□ 0.68
SYNRG-223ENST00000616179 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
SYNRG-223ENST00000616179 EXOSC9Q06265 439 aaKnown RBP19.27■□□□□ 0.68
SYNRG-223ENST00000616179 DENND4BO75064 1496 aaPredicted RBP19.27■□□□□ 0.68
SYNRG-223ENST00000616179 CIZ1Q9ULV3 898 aaPredicted RBP19.27■□□□□ 0.67
SYNRG-223ENST00000616179 BAG4O95429 457 aaKnown RBP19.26■□□□□ 0.67
SYNRG-223ENST00000616179 DRC7Q8IY82 874 aa19.26■□□□□ 0.67
SYNRG-223ENST00000616179 BBXQ8WY36 941 aaPredicted RBP19.26■□□□□ 0.67
SYNRG-223ENST00000616179 NUCB2P80303 420 aa19.26■□□□□ 0.67
SYNRG-223ENST00000616179 ZNF830Q96NB3 372 aaPredicted RBP19.25■□□□□ 0.67
SYNRG-223ENST00000616179 FANCD2Q9BXW9 1451 aa19.25■□□□□ 0.67
SYNRG-223ENST00000616179 ROCK1Q13464 1354 aa19.25■□□□□ 0.67
SYNRG-223ENST00000616179 ST18O60284 1047 aa19.25■□□□□ 0.67
SYNRG-223ENST00000616179 NOB1Q9ULX3 412 aaKnown RBP19.24■□□□□ 0.67
SYNRG-223ENST00000616179 PRIM1P49642 420 aaKnown RBP19.24■□□□□ 0.67
SYNRG-223ENST00000616179 PLEKHH2Q8IVE3 1493 aa19.24■□□□□ 0.67
SYNRG-223ENST00000616179 SASS6Q6UVJ0 657 aa19.23■□□□□ 0.67
SYNRG-223ENST00000616179 ZSCAN23Q3MJ62 389 aa19.22■□□□□ 0.67
SYNRG-223ENST00000616179 MTHFSP49914 203 aa19.22■□□□□ 0.67
SYNRG-223ENST00000616179 GAS2L2Q8NHY3 880 aa19.22■□□□□ 0.67
SYNRG-223ENST00000616179 SYAP1Q96A49 352 aaPredicted RBP19.22■□□□□ 0.67
SYNRG-223ENST00000616179 RIPK4P57078 832 aa19.21■□□□□ 0.67
SYNRG-223ENST00000616179 RAB3GAP1Q15042 981 aa19.21■□□□□ 0.67
SYNRG-223ENST00000616179 KLHL40Q2TBA0 621 aa19.21■□□□□ 0.67
SYNRG-223ENST00000616179 TESK2Q96S53 571 aa19.21■□□□□ 0.67
SYNRG-223ENST00000616179 EPRSP07814 1512 aaKnown RBP19.2■□□□□ 0.66
SYNRG-223ENST00000616179 DYNC1I1O14576 645 aa19.2■□□□□ 0.66
SYNRG-223ENST00000616179 PPP4R3BQ5MIZ7 849 aa19.2■□□□□ 0.66
SYNRG-223ENST00000616179 RBSNQ9H1K0 784 aa19.2■□□□□ 0.66
SYNRG-223ENST00000616179 SNAPC4Q5SXM2 1469 aa19.2■□□□□ 0.66
SYNRG-223ENST00000616179 TMEM57Q8N5G2 664 aa19.2■□□□□ 0.66
SYNRG-223ENST00000616179 PRG4Q92954 1404 aaPredicted RBP19.2■□□□□ 0.66
SYNRG-223ENST00000616179 TRAK1Q9UPV9 953 aa19.2■□□□□ 0.66
SYNRG-223ENST00000616179 UGGT2Q9NYU1 1516 aa19.19■□□□□ 0.66
SYNRG-223ENST00000616179 AAMPQ13685 434 aa19.19■□□□□ 0.66
SYNRG-223ENST00000616179 CHD1LQ86WJ1 897 aa19.19■□□□□ 0.66
SYNRG-223ENST00000616179 PDE4CQ08493 712 aa19.18■□□□□ 0.66
SYNRG-223ENST00000616179 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
SYNRG-223ENST00000616179 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
SYNRG-223ENST00000616179 RALGAPBQ86X10 1494 aa19.18■□□□□ 0.66
SYNRG-223ENST00000616179 KIF16BQ96L93 1317 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms