RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
SCAMP1-205ENST00000614488 AK7Q96M32 723 aa11.96□□□□□ -0.49
SCAMP1-205ENST00000614488 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
SCAMP1-205ENST00000614488 HCSTQ9UBK5 93 aa11.95□□□□□ -0.5
SCAMP1-205ENST00000614488 TSR3Q9UJK0 312 aaKnown RBP11.94□□□□□ -0.5
SCAMP1-205ENST00000614488 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
SCAMP1-205ENST00000614488 SLC24A3Q9HC58 644 aa11.93□□□□□ -0.5
SCAMP1-205ENST00000614488 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
SCAMP1-205ENST00000614488 AMHR2Q16671 573 aa11.92□□□□□ -0.5
SCAMP1-205ENST00000614488 TPRNQ4KMQ1 711 aa11.92□□□□□ -0.5
SCAMP1-205ENST00000614488 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
SCAMP1-205ENST00000614488 TRIM66O15016 1216 aa11.9□□□□□ -0.5
SCAMP1-205ENST00000614488 RNF40O75150 1001 aa11.9□□□□□ -0.5
SCAMP1-205ENST00000614488 PTPN5P54829 565 aa11.9□□□□□ -0.5
SCAMP1-205ENST00000614488 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
SCAMP1-205ENST00000614488 CLCN1P35523 988 aa11.89□□□□□ -0.51
SCAMP1-205ENST00000614488 PPP4CP60510 307 aa11.89□□□□□ -0.51
SCAMP1-205ENST00000614488 WBP1LQ9NX94 342 aa11.89□□□□□ -0.51
SCAMP1-205ENST00000614488 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
SCAMP1-205ENST00000614488 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
SCAMP1-205ENST00000614488 SULF1Q8IWU6 871 aa11.87□□□□□ -0.51
SCAMP1-205ENST00000614488 TMUB1Q9BVT8 246 aa11.87□□□□□ -0.51
SCAMP1-205ENST00000614488 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
SCAMP1-205ENST00000614488 PRR14Q9BWN1 585 aa11.84□□□□□ -0.51
SCAMP1-205ENST00000614488 SLC10A3P09131 477 aa11.83□□□□□ -0.52
SCAMP1-205ENST00000614488 TTLL12Q14166 644 aaPredicted RBP11.83□□□□□ -0.52
SCAMP1-205ENST00000614488 DDX11L8A8MPP1 907 aa11.82□□□□□ -0.52
SCAMP1-205ENST00000614488 PDE4DQ08499 809 aa11.81□□□□□ -0.52
SCAMP1-205ENST00000614488 REPIN1Q9BWE0 567 aaKnown RBP11.81□□□□□ -0.52
SCAMP1-205ENST00000614488 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
SCAMP1-205ENST00000614488 CFHP08603 1231 aa11.8□□□□□ -0.52
SCAMP1-205ENST00000614488 KMT5BQ4FZB7 885 aa11.8□□□□□ -0.52
SCAMP1-205ENST00000614488 PARP9Q8IXQ6 854 aa11.8□□□□□ -0.52
SCAMP1-205ENST00000614488 RDH13Q8NBN7 331 aa11.8□□□□□ -0.52
SCAMP1-205ENST00000614488 CD46P15529 392 aa11.79□□□□□ -0.52
SCAMP1-205ENST00000614488 APLP1P51693 650 aa11.79□□□□□ -0.52
SCAMP1-205ENST00000614488 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
SCAMP1-205ENST00000614488 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
SCAMP1-205ENST00000614488 GCGRP47871 477 aa11.75□□□□□ -0.53
SCAMP1-205ENST00000614488 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
SCAMP1-205ENST00000614488 ITGBL1O95965 494 aaPredicted RBP11.72□□□□□ -0.53
SCAMP1-205ENST00000614488 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
SCAMP1-205ENST00000614488 PCDHB3Q9Y5E6 796 aa11.71□□□□□ -0.53
SCAMP1-205ENST00000614488 MS4A1P11836 297 aa11.69□□□□□ -0.54
SCAMP1-205ENST00000614488 USP46P62068 366 aa11.68□□□□□ -0.54
SCAMP1-205ENST00000614488 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
SCAMP1-205ENST00000614488 MTRQ99707 1265 aa11.68□□□□□ -0.54
SCAMP1-205ENST00000614488 IL21Q9HBE4 155 aa11.68□□□□□ -0.54
SCAMP1-205ENST00000614488 KDM4AO75164 1064 aa11.67□□□□□ -0.54
SCAMP1-205ENST00000614488 IFFO2Q5TF58 517 aa11.67□□□□□ -0.54
SCAMP1-205ENST00000614488 ATP6V1AP38606 617 aa11.66□□□□□ -0.54
SCAMP1-205ENST00000614488 FUT2Q10981 343 aa11.66□□□□□ -0.54
SCAMP1-205ENST00000614488 BEGAINQ9BUH8 593 aa11.66□□□□□ -0.54
SCAMP1-205ENST00000614488 KDM4CQ9H3R0 1056 aa11.66□□□□□ -0.54
SCAMP1-205ENST00000614488 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
SCAMP1-205ENST00000614488 KCNC4Q03721 635 aa11.65□□□□□ -0.54
SCAMP1-205ENST00000614488 GRIPAP1Q4V328 841 aa11.65□□□□□ -0.54
SCAMP1-205ENST00000614488 BLOC1S3Q6QNY0 202 aa11.65□□□□□ -0.54
SCAMP1-205ENST00000614488 GPBP1L1Q9HC44 474 aaPredicted RBP11.65□□□□□ -0.54
SCAMP1-205ENST00000614488 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
SCAMP1-205ENST00000614488 NR1I2O75469 434 aa11.63□□□□□ -0.55
SCAMP1-205ENST00000614488 COPS2P61201 443 aa11.63□□□□□ -0.55
SCAMP1-205ENST00000614488 DIXDC1Q155Q3 683 aa11.62□□□□□ -0.55
SCAMP1-205ENST00000614488 NEUROD2Q15784 382 aa11.62□□□□□ -0.55
SCAMP1-205ENST00000614488 MORN1Q5T089 497 aa11.62□□□□□ -0.55
SCAMP1-205ENST00000614488 HOXA2O43364 376 aa11.61□□□□□ -0.55
SCAMP1-205ENST00000614488 ZPR1O75312 459 aa11.61□□□□□ -0.55
SCAMP1-205ENST00000614488 BRPF1P55201 1214 aaPredicted RBP11.61□□□□□ -0.55
SCAMP1-205ENST00000614488 PUS10Q3MIT2 529 aaKnown RBP11.61□□□□□ -0.55
SCAMP1-205ENST00000614488 SPIRE2Q8WWL2 714 aa11.61□□□□□ -0.55
SCAMP1-205ENST00000614488 ZNF516Q92618 1163 aa11.59□□□□□ -0.55
SCAMP1-205ENST00000614488 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
SCAMP1-205ENST00000614488 SCUBE3Q8IX30 993 aa11.57□□□□□ -0.56
SCAMP1-205ENST00000614488 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
SCAMP1-205ENST00000614488 SLC27A5Q9Y2P5 690 aa11.56□□□□□ -0.56
SCAMP1-205ENST00000614488 SALL2Q9Y467 1007 aaPredicted RBP11.56□□□□□ -0.56
SCAMP1-205ENST00000614488 FAM117AQ9C073 453 aa11.55□□□□□ -0.56
SCAMP1-205ENST00000614488 GJA5P36382 358 aa11.54□□□□□ -0.56
SCAMP1-205ENST00000614488 Q3C1V9 767 aa11.54□□□□□ -0.56
SCAMP1-205ENST00000614488 ADH1BP00325 375 aa11.53□□□□□ -0.56
SCAMP1-205ENST00000614488 HLA-CQ95604 372 aa11.53□□□□□ -0.56
SCAMP1-205ENST00000614488 MOXD2PA6NHM9 499 aa11.52□□□□□ -0.57
SCAMP1-205ENST00000614488 TLL1O43897 1013 aa11.52□□□□□ -0.57
SCAMP1-205ENST00000614488 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
SCAMP1-205ENST00000614488 FDX1P10109 184 aa11.52□□□□□ -0.57
SCAMP1-205ENST00000614488 THAP11Q96EK4 314 aa11.52□□□□□ -0.57
SCAMP1-205ENST00000614488 RSPH6AQ9H0K4 717 aa11.52□□□□□ -0.57
SCAMP1-205ENST00000614488 A0A0G2JS52 829 aa11.51□□□□□ -0.57
SCAMP1-205ENST00000614488 PLEKHG3A1L390 1219 aa11.51□□□□□ -0.57
SCAMP1-205ENST00000614488 MYSM1Q5VVJ2 828 aa11.51□□□□□ -0.57
SCAMP1-205ENST00000614488 SPTLC1O15269 473 aa11.5□□□□□ -0.57
SCAMP1-205ENST00000614488 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
SCAMP1-205ENST00000614488 RSBN1LQ6PCB5 846 aaPredicted RBP11.5□□□□□ -0.57
SCAMP1-205ENST00000614488 BRICD5Q6PL45 260 aa11.5□□□□□ -0.57
SCAMP1-205ENST00000614488 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
SCAMP1-205ENST00000614488 SPSB2Q99619 263 aa11.5□□□□□ -0.57
SCAMP1-205ENST00000614488 NDUFV2P19404 249 aa11.49□□□□□ -0.57
SCAMP1-205ENST00000614488 RNF19BQ6ZMZ0 732 aa11.48□□□□□ -0.57
SCAMP1-205ENST00000614488 TUSC1Q2TAM9 212 aa11.47□□□□□ -0.57
SCAMP1-205ENST00000614488 SH3D19Q5HYK7 790 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms