RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 BECN2A8MW95 431 aa8.38□□□□□ -1.07
CLCN3-211ENST00000613795 LETM1O95202 739 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-211ENST00000613795 HSP90B2PQ58FF3 399 aa8.38□□□□□ -1.07
CLCN3-211ENST00000613795 MIA2Q96PC5 1412 aa8.38□□□□□ -1.07
CLCN3-211ENST00000613795 GRPEL1Q9HAV7 217 aa8.38□□□□□ -1.07
CLCN3-211ENST00000613795 STK26Q9P289 416 aa8.38□□□□□ -1.07
CLCN3-211ENST00000613795 ERICH3Q5RHP9 1530 aa8.38□□□□□ -1.07
CLCN3-211ENST00000613795 LRRFIP1Q32MZ4 808 aaKnown RBP8.38□□□□□ -1.07
CLCN3-211ENST00000613795 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
CLCN3-211ENST00000613795 USP8P40818 1118 aa8.38□□□□□ -1.07
CLCN3-211ENST00000613795 MNS1Q8NEH6 495 aa8.37□□□□□ -1.07
CLCN3-211ENST00000613795 AK7Q96M32 723 aa8.37□□□□□ -1.07
CLCN3-211ENST00000613795 LEKR1Q6ZMV7 388 aa8.37□□□□□ -1.07
CLCN3-211ENST00000613795 ROCK1Q13464 1354 aa8.37□□□□□ -1.07
CLCN3-211ENST00000613795 HNRNPMP52272 730 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLCN3-211ENST00000613795 SENP3Q9H4L4 574 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-211ENST00000613795 KIF21BO75037 1637 aa8.37□□□□□ -1.07
CLCN3-211ENST00000613795 FYCO1Q9BQS8 1478 aa8.37□□□□□ -1.07
CLCN3-211ENST00000613795 MBD3O95983 291 aa8.37□□□□□ -1.07
CLCN3-211ENST00000613795 CAVIN1Q6NZI2 390 aaKnown RBP8.37□□□□□ -1.07
CLCN3-211ENST00000613795 ERCC4Q92889 916 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-211ENST00000613795 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
CLCN3-211ENST00000613795 BACH2Q9BYV9 841 aa8.36□□□□□ -1.07
CLCN3-211ENST00000613795 WWC1Q8IX03 1113 aa8.36□□□□□ -1.07
CLCN3-211ENST00000613795 EFCAB5A4FU69 1503 aa8.36□□□□□ -1.07
CLCN3-211ENST00000613795 PAXIP1Q6ZW49 1069 aaPredicted RBP8.36□□□□□ -1.07
CLCN3-211ENST00000613795 ZSCAN30Q86W11 494 aa8.36□□□□□ -1.07
CLCN3-211ENST00000613795 CCAR2Q8N163 923 aaKnown RBP8.36□□□□□ -1.07
CLCN3-211ENST00000613795 L3MBTL2Q969R5 705 aa8.36□□□□□ -1.07
CLCN3-211ENST00000613795 SMC4Q9NTJ3 1288 aa8.36□□□□□ -1.07
CLCN3-211ENST00000613795 SCAPERQ9BY12 1400 aa8.36□□□□□ -1.07
CLCN3-211ENST00000613795 E9PSI1 815 aa8.36□□□□□ -1.07
CLCN3-211ENST00000613795 DEF6Q9H4E7 631 aa8.36□□□□□ -1.07
CLCN3-211ENST00000613795 FGD5Q6ZNL6 1462 aa8.35□□□□□ -1.07
CLCN3-211ENST00000613795 PLEKHH2Q8IVE3 1493 aa8.35□□□□□ -1.07
CLCN3-211ENST00000613795 HOMER1Q86YM7 354 aa8.35□□□□□ -1.07
CLCN3-211ENST00000613795 NGDNQ8NEJ9 315 aaKnown RBP8.35□□□□□ -1.07
CLCN3-211ENST00000613795 TPM1P09493 284 aa8.35□□□□□ -1.07
CLCN3-211ENST00000613795 C22orf23Q9BZE7 217 aa8.35□□□□□ -1.07
CLCN3-211ENST00000613795 CDR1P51861 262 aa8.35□□□□□ -1.07
CLCN3-211ENST00000613795 CALCOCO1Q9P1Z2 691 aa8.35□□□□□ -1.07
CLCN3-211ENST00000613795 AMPHP49418 695 aa8.34□□□□□ -1.07
CLCN3-211ENST00000613795 DHX8Q14562 1220 aaKnown RBP8.34□□□□□ -1.07
CLCN3-211ENST00000613795 GORABQ5T7V8 394 aa8.34□□□□□ -1.07
CLCN3-211ENST00000613795 CCDC9Q9Y3X0 531 aaKnown RBP8.34□□□□□ -1.07
CLCN3-211ENST00000613795 CCP110O43303 1012 aa8.34□□□□□ -1.07
CLCN3-211ENST00000613795 REC8O95072 547 aa8.34□□□□□ -1.07
CLCN3-211ENST00000613795 TAF7LQ5H9L4 462 aa8.34□□□□□ -1.07
CLCN3-211ENST00000613795 MCTP1Q6DN14 999 aa8.34□□□□□ -1.07
CLCN3-211ENST00000613795 H0YHG0 523 aa8.34□□□□□ -1.07
CLCN3-211ENST00000613795 CASKIN1Q8WXD9 1431 aa8.34□□□□□ -1.07
CLCN3-211ENST00000613795 SAFB2Q14151 953 aaKnown RBP eCLIP8.33□□□□□ -1.08
CLCN3-211ENST00000613795 COG3Q96JB2 828 aa8.33□□□□□ -1.08
CLCN3-211ENST00000613795 FBXO3Q9UK99 471 aa8.33□□□□□ -1.08
CLCN3-211ENST00000613795 SASS6Q6UVJ0 657 aa8.33□□□□□ -1.08
CLCN3-211ENST00000613795 TSPY26PQ9H489 355 aa8.33□□□□□ -1.08
CLCN3-211ENST00000613795 RNF20Q5VTR2 975 aa8.33□□□□□ -1.08
CLCN3-211ENST00000613795 TSR1Q2NL82 804 aaKnown RBP8.32□□□□□ -1.08
CLCN3-211ENST00000613795 CCDC191Q8NCU4 936 aa8.32□□□□□ -1.08
CLCN3-211ENST00000613795 TPD52L1Q16890 204 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-211ENST00000613795 GRIN2BQ13224 1484 aa8.32□□□□□ -1.08
CLCN3-211ENST00000613795 PLIN1O60240 522 aa8.32□□□□□ -1.08
CLCN3-211ENST00000613795 HSP90B1P14625 803 aaKnown RBP8.32□□□□□ -1.08
CLCN3-211ENST00000613795 FOXD4L5Q5VV16 416 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-211ENST00000613795 FOXD4L4Q8WXT5 416 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-211ENST00000613795 RUFY1Q96T51 708 aa8.32□□□□□ -1.08
CLCN3-211ENST00000613795 DCTN1Q14203 1278 aa8.31□□□□□ -1.08
CLCN3-211ENST00000613795 CIZ1Q9ULV3 898 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-211ENST00000613795 CNTLNQ9NXG0 1405 aa8.31□□□□□ -1.08
CLCN3-211ENST00000613795 C11orf95C9JLR9 678 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-211ENST00000613795 C1orf141Q5JVX7 400 aa8.31□□□□□ -1.08
CLCN3-211ENST00000613795 ZKSCAN2Q63HK3 967 aa8.31□□□□□ -1.08
CLCN3-211ENST00000613795 RRBP1Q9P2E9 1410 aaKnown RBP8.31□□□□□ -1.08
CLCN3-211ENST00000613795 OSCARQ8IYS5 282 aa8.31□□□□□ -1.08
CLCN3-211ENST00000613795 FGD6Q6ZV73 1430 aa8.31□□□□□ -1.08
CLCN3-211ENST00000613795 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
CLCN3-211ENST00000613795 TRIM6-TRIM34B2RNG4 842 aa8.31□□□□□ -1.08
CLCN3-211ENST00000613795 USP47Q96K76 1375 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 FOXD1Q16676 465 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 CCDC112Q8NEF3 446 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 EHBP1L1Q8N3D4 1523 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 IGF1RP08069 1367 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 DDX19BQ9UMR2 479 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 APBB1O00213 710 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 DYNC1I1O14576 645 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 SOX12O15370 315 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 MCM4P33991 863 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 CLCN1P35523 988 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
CLCN3-211ENST00000613795 RUFY2Q8WXA3 655 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 HMGXB3Q12766 1538 aa8.3□□□□□ -1.08
CLCN3-211ENST00000613795 TMEM132AQ24JP5 1023 aa8.29□□□□□ -1.08
CLCN3-211ENST00000613795 IFT140Q96RY7 1462 aa8.29□□□□□ -1.08
CLCN3-211ENST00000613795 MCM5P33992 734 aa8.29□□□□□ -1.08
CLCN3-211ENST00000613795 RRP12Q5JTH9 1297 aaKnown RBP8.29□□□□□ -1.08
CLCN3-211ENST00000613795 BBXQ8WY36 941 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-211ENST00000613795 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
CLCN3-211ENST00000613795 H3BQV1 296 aa8.29□□□□□ -1.08
CLCN3-211ENST00000613795 IFFO2Q5TF58 517 aa8.29□□□□□ -1.08
CLCN3-211ENST00000613795 NOL8Q76FK4 1167 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms