RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 SLF2Q8IX21 1173 aa7.38□□□□□ -1.23
LINC00649-216ENST00000613667 PRR14Q9BWN1 585 aa7.38□□□□□ -1.23
LINC00649-216ENST00000613667 PDIA6Q15084 440 aa7.37□□□□□ -1.23
LINC00649-216ENST00000613667 CRIPAKQ8N1N5 446 aa7.36□□□□□ -1.23
LINC00649-216ENST00000613667 CDHR5Q9HBB8 845 aa7.36□□□□□ -1.23
LINC00649-216ENST00000613667 TNFRSF10AO00220 468 aa7.35□□□□□ -1.23
LINC00649-216ENST00000613667 SLC4A3P48751 1232 aa7.35□□□□□ -1.23
LINC00649-216ENST00000613667 NFX1Q12986 1120 aaKnown RBP7.35□□□□□ -1.23
LINC00649-216ENST00000613667 SWT1Q5T5J6 900 aaKnown RBP7.35□□□□□ -1.23
LINC00649-216ENST00000613667 RBM27Q9P2N5 1060 aaKnown RBP7.35□□□□□ -1.23
LINC00649-216ENST00000613667 LIAT1Q6ZQX7 453 aa7.34□□□□□ -1.23
LINC00649-216ENST00000613667 PCDHB3Q9Y5E6 796 aa7.34□□□□□ -1.23
LINC00649-216ENST00000613667 PPEF1O14829 653 aaPredicted RBP7.33□□□□□ -1.24
LINC00649-216ENST00000613667 TLL1O43897 1013 aa7.33□□□□□ -1.24
LINC00649-216ENST00000613667 LMOD2Q6P5Q4 547 aa7.33□□□□□ -1.24
LINC00649-216ENST00000613667 BLOC1S3Q6QNY0 202 aa7.32□□□□□ -1.24
LINC00649-216ENST00000613667 C11orf95C9JLR9 678 aaPredicted RBP7.31□□□□□ -1.24
LINC00649-216ENST00000613667 SPDYE16A6NNV3 312 aaPredicted RBP7.3□□□□□ -1.24
LINC00649-216ENST00000613667 GMPR2Q9P2T1 348 aaKnown RBP7.3□□□□□ -1.24
LINC00649-216ENST00000613667 DACH1Q9UI36 760 aa7.3□□□□□ -1.24
LINC00649-216ENST00000613667 GRXCR2A6NFK2 248 aa7.29□□□□□ -1.24
LINC00649-216ENST00000613667 AVPP01185 164 aa7.29□□□□□ -1.24
LINC00649-216ENST00000613667 TTC13Q8NBP0 860 aa7.29□□□□□ -1.24
LINC00649-216ENST00000613667 FAM181BA6NEQ2 426 aa7.28□□□□□ -1.24
LINC00649-216ENST00000613667 S1PR4O95977 384 aa7.28□□□□□ -1.24
LINC00649-216ENST00000613667 CTC1Q2NKJ3 1217 aa7.28□□□□□ -1.24
LINC00649-216ENST00000613667 AXIN1O15169 862 aa7.27□□□□□ -1.25
LINC00649-216ENST00000613667 OSBPP22059 807 aa7.27□□□□□ -1.25
LINC00649-216ENST00000613667 PLA2G2CQ5R387 149 aa7.27□□□□□ -1.25
LINC00649-216ENST00000613667 PADI6Q6TGC4 694 aa7.27□□□□□ -1.25
LINC00649-216ENST00000613667 SMCPP49901 116 aaPredicted RBP7.26□□□□□ -1.25
LINC00649-216ENST00000613667 NPDC1Q9NQX5 325 aaPredicted RBP7.26□□□□□ -1.25
LINC00649-216ENST00000613667 PKD2L1Q9P0L9 805 aa7.26□□□□□ -1.25
LINC00649-216ENST00000613667 ADH1BP00325 375 aa7.24□□□□□ -1.25
LINC00649-216ENST00000613667 LCE2CQ5TA81 110 aa7.24□□□□□ -1.25
LINC00649-216ENST00000613667 EYA1Q99502 592 aa7.24□□□□□ -1.25
LINC00649-216ENST00000613667 TERTO14746 1132 aaKnown RBP7.23□□□□□ -1.25
LINC00649-216ENST00000613667 FOXC1Q12948 553 aa7.23□□□□□ -1.25
LINC00649-216ENST00000613667 TOR4AQ9NXH8 423 aa7.22□□□□□ -1.25
LINC00649-216ENST00000613667 ACTN4O43707 911 aaKnown RBP7.21□□□□□ -1.26
LINC00649-216ENST00000613667 KMT5BQ4FZB7 885 aa7.21□□□□□ -1.26
LINC00649-216ENST00000613667 SLC6A16Q9GZN6 736 aa7.21□□□□□ -1.26
LINC00649-216ENST00000613667 CYP4X1Q8N118 509 aa7.2□□□□□ -1.26
LINC00649-216ENST00000613667 RPIAP49247 311 aa7.19□□□□□ -1.26
LINC00649-216ENST00000613667 NR1I2O75469 434 aa7.18□□□□□ -1.26
LINC00649-216ENST00000613667 SUZ12Q15022 739 aaKnown RBP7.17□□□□□ -1.26
LINC00649-216ENST00000613667 SENP2Q9HC62 589 aa7.17□□□□□ -1.26
LINC00649-216ENST00000613667 ARIH1Q9Y4X5 557 aaPredicted RBP7.17□□□□□ -1.26
LINC00649-216ENST00000613667 CD2BP2O95400 341 aaKnown RBP7.15□□□□□ -1.26
LINC00649-216ENST00000613667 DCAF8L2P0C7V8 631 aa7.15□□□□□ -1.26
LINC00649-216ENST00000613667 E2F4Q16254 413 aa7.15□□□□□ -1.26
LINC00649-216ENST00000613667 TRIM47Q96LD4 638 aa7.15□□□□□ -1.26
LINC00649-216ENST00000613667 ATP13A2Q9NQ11 1180 aa7.15□□□□□ -1.26
LINC00649-216ENST00000613667 CFHP08603 1231 aa7.14□□□□□ -1.27
LINC00649-216ENST00000613667 SNRPBP14678 240 aaKnown RBP7.14□□□□□ -1.27
LINC00649-216ENST00000613667 DNAJB2P25686 324 aa7.14□□□□□ -1.27
LINC00649-216ENST00000613667 SLC16A10Q8TF71 515 aa7.14□□□□□ -1.27
LINC00649-216ENST00000613667 SLC10A3P09131 477 aa7.13□□□□□ -1.27
LINC00649-216ENST00000613667 ZSCAN1Q8NBB4 408 aa7.13□□□□□ -1.27
LINC00649-216ENST00000613667 KIFC2Q96AC6 838 aa7.13□□□□□ -1.27
LINC00649-216ENST00000613667 TMEM134Q9H6X4 195 aa7.13□□□□□ -1.27
LINC00649-216ENST00000613667 TTC24A2A3L6 582 aaPredicted RBP7.11□□□□□ -1.27
LINC00649-216ENST00000613667 SCUBE3Q8IX30 993 aa7.1□□□□□ -1.27
LINC00649-216ENST00000613667 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
LINC00649-216ENST00000613667 FAM161AQ3B820 660 aa7.09□□□□□ -1.27
LINC00649-216ENST00000613667 PUS10Q3MIT2 529 aaKnown RBP7.09□□□□□ -1.27
LINC00649-216ENST00000613667 SPSB2Q99619 263 aa7.09□□□□□ -1.27
LINC00649-216ENST00000613667 RCCD1A6NED2 376 aa7.08□□□□□ -1.28
LINC00649-216ENST00000613667 RBM46Q8TBY0 533 aaKnown RBP7.08□□□□□ -1.28
LINC00649-216ENST00000613667 ADGRG1Q9Y653 693 aa7.08□□□□□ -1.28
LINC00649-216ENST00000613667 NPAS3Q8IXF0 933 aa7.07□□□□□ -1.28
LINC00649-216ENST00000613667 SMPD1P17405 629 aa7.06□□□□□ -1.28
LINC00649-216ENST00000613667 GMPRP36959 345 aa7.06□□□□□ -1.28
LINC00649-216ENST00000613667 SNIP1Q8TAD8 396 aaKnown RBP7.06□□□□□ -1.28
LINC00649-216ENST00000613667 IRF7Q92985 503 aa7.06□□□□□ -1.28
LINC00649-216ENST00000613667 NXF1Q9UBU9 619 aaKnown RBP7.06□□□□□ -1.28
LINC00649-216ENST00000613667 FCF1Q9Y324 198 aaKnown RBP7.06□□□□□ -1.28
LINC00649-216ENST00000613667 PTGDRQ13258 359 aa7.05□□□□□ -1.28
LINC00649-216ENST00000613667 WNT7AO00755 349 aa7.04□□□□□ -1.28
LINC00649-216ENST00000613667 ZBTB24O43167 697 aaPredicted RBP7.03□□□□□ -1.28
LINC00649-216ENST00000613667 MLLT3P42568 568 aaPredicted RBP7.03□□□□□ -1.28
LINC00649-216ENST00000613667 FAM160A2Q8N612 972 aaPredicted RBP7.02□□□□□ -1.29
LINC00649-216ENST00000613667 RSPH4AQ5TD94 716 aa7.01□□□□□ -1.29
LINC00649-216ENST00000613667 THAP11Q96EK4 314 aa7.01□□□□□ -1.29
LINC00649-216ENST00000613667 PRDM9Q9NQV7 894 aa7.01□□□□□ -1.29
LINC00649-216ENST00000613667 J3QL48 77 aa7□□□□□ -1.29
LINC00649-216ENST00000613667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.99□□□□□ -1.29
LINC00649-216ENST00000613667 WDR70Q9NW82 654 aa6.99□□□□□ -1.29
LINC00649-216ENST00000613667 REPIN1Q9BWE0 567 aaKnown RBP6.98□□□□□ -1.29
LINC00649-216ENST00000613667 H3BM21 787 aa6.97□□□□□ -1.29
LINC00649-216ENST00000613667 FMNL1O95466 1100 aaPredicted RBP6.97□□□□□ -1.29
LINC00649-216ENST00000613667 KCNMA1Q12791 1236 aa6.97□□□□□ -1.29
LINC00649-216ENST00000613667 MORN1Q5T089 497 aa6.97□□□□□ -1.29
LINC00649-216ENST00000613667 BBXQ8WY36 941 aaPredicted RBP6.97□□□□□ -1.29
LINC00649-216ENST00000613667 HPS1Q92902 700 aa6.97□□□□□ -1.29
LINC00649-216ENST00000613667 MRGPRX2Q96LB1 330 aa6.97□□□□□ -1.29
LINC00649-216ENST00000613667 PXYLP1Q8TE99 480 aa6.96□□□□□ -1.3
LINC00649-216ENST00000613667 TRIM32Q13049 653 aa6.95□□□□□ -1.3
LINC00649-216ENST00000613667 KCTD17Q8N5Z5 321 aa6.95□□□□□ -1.3
LINC00649-216ENST00000613667 SALL2Q9Y467 1007 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms