RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 UBR1Q8IWV7 1749 aa28.76■■■□□ 2.2
CPNE9-205ENST00000613455 ADGRF5Q8IZF2 1346 aa28.76■■■□□ 2.19
CPNE9-205ENST00000613455 MYO3AQ8NEV4 1616 aa28.74■■■□□ 2.19
CPNE9-205ENST00000613455 PLPPR3Q6T4P5 718 aa28.74■■■□□ 2.19
CPNE9-205ENST00000613455 KIAA1210Q9ULL0 1709 aa28.74■■■□□ 2.19
CPNE9-205ENST00000613455 GPRASP1Q5JY77 1395 aa28.72■■■□□ 2.19
CPNE9-205ENST00000613455 STAG3Q9UJ98 1225 aa28.72■■■□□ 2.19
CPNE9-205ENST00000613455 LAMC1P11047 1609 aa28.72■■■□□ 2.19
CPNE9-205ENST00000613455 ROCK2O75116 1388 aaKnown RBP28.72■■■□□ 2.19
CPNE9-205ENST00000613455 PIK3C2GO75747 1445 aa28.71■■■□□ 2.19
CPNE9-205ENST00000613455 ZFYVE9O95405 1425 aa28.71■■■□□ 2.19
CPNE9-205ENST00000613455 NBPF1Q3BBV0 1214 aa28.69■■■□□ 2.18
CPNE9-205ENST00000613455 PTPRMP28827 1452 aa28.68■■■□□ 2.18
CPNE9-205ENST00000613455 EIF4G2P78344 907 aaKnown RBP eCLIP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 VGFO15240 615 aaPredicted RBP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 HSPA5P11021 654 aaKnown RBP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 NUTM2DQ5VT03 806 aaPredicted RBP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 HIRIP3Q9BW71 556 aaPredicted RBP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 CARD11Q9BXL7 1154 aa28.66■■■□□ 2.18
CPNE9-205ENST00000613455 USP47Q96K76 1375 aa28.65■■■□□ 2.18
CPNE9-205ENST00000613455 RIMS2Q9UQ26 1411 aa28.65■■■□□ 2.18
CPNE9-205ENST00000613455 CEP170BQ9Y4F5 1589 aaPredicted RBP28.62■■■□□ 2.17
CPNE9-205ENST00000613455 ZNF142P52746 1687 aaPredicted RBP28.61■■■□□ 2.17
CPNE9-205ENST00000613455 SETD1BQ9UPS6 1966 aaKnown RBP28.61■■■□□ 2.17
CPNE9-205ENST00000613455 CFAP70Q5T0N1 1121 aa28.6■■■□□ 2.17
CPNE9-205ENST00000613455 TMEM2Q9UHN6 1383 aa28.6■■■□□ 2.17
CPNE9-205ENST00000613455 IQGAP1P46940 1657 aa28.6■■■□□ 2.17
CPNE9-205ENST00000613455 SETBP1Q9Y6X0 1596 aa28.59■■■□□ 2.17
CPNE9-205ENST00000613455 C14orf93Q9H972 538 aaKnown RBP28.57■■■□□ 2.16
CPNE9-205ENST00000613455 SLIT1O75093 1534 aa28.56■■■□□ 2.16
CPNE9-205ENST00000613455 ADGRB1O14514 1584 aa28.56■■■□□ 2.16
CPNE9-205ENST00000613455 ARHGAP23Q9P227 1491 aa28.55■■■□□ 2.16
CPNE9-205ENST00000613455 NRXN3Q9Y4C0 1643 aa28.53■■■□□ 2.16
CPNE9-205ENST00000613455 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.52■■■□□ 2.16
CPNE9-205ENST00000613455 SCAF11Q99590 1463 aaKnown RBP28.51■■■□□ 2.16
CPNE9-205ENST00000613455 ASXL1Q8IXJ9 1541 aa28.51■■■□□ 2.15
CPNE9-205ENST00000613455 ALKQ9UM73 1620 aa28.5■■■□□ 2.15
CPNE9-205ENST00000613455 SETD1AO15047 1707 aaKnown RBP28.5■■■□□ 2.15
CPNE9-205ENST00000613455 KDM4FA0A1W2PPD8 638 aa28.49■■■□□ 2.15
CPNE9-205ENST00000613455 THEMISQ8N1K5 641 aaPredicted RBP28.48■■■□□ 2.15
CPNE9-205ENST00000613455 ST20-MTHFSA0A0A6YYL1 179 aa28.47■■■□□ 2.15
CPNE9-205ENST00000613455 HDGFP51858 240 aaKnown RBP28.47■■■□□ 2.15
CPNE9-205ENST00000613455 POLR1AO95602 1720 aaPredicted RBP28.47■■■□□ 2.15
CPNE9-205ENST00000613455 LTKP29376 864 aa28.46■■■□□ 2.15
CPNE9-205ENST00000613455 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
CPNE9-205ENST00000613455 TMEM132EQ6IEE7 984 aa28.43■■■□□ 2.14
CPNE9-205ENST00000613455 PLEKHG1Q9ULL1 1385 aa28.42■■■□□ 2.14
CPNE9-205ENST00000613455 C11orf95C9JLR9 678 aaPredicted RBP28.41■■■□□ 2.14
CPNE9-205ENST00000613455 TXNDC2Q86VQ3 553 aa28.4■■■□□ 2.14
CPNE9-205ENST00000613455 EIF3AQ14152 1382 aaKnown RBP28.4■■■□□ 2.14
CPNE9-205ENST00000613455 WASHC2AQ641Q2 1341 aa28.39■■■□□ 2.14
CPNE9-205ENST00000613455 EID1Q9Y6B2 187 aa28.39■■■□□ 2.14
CPNE9-205ENST00000613455 ARHGEF28Q8N1W1 1705 aaKnown RBP28.38■■■□□ 2.13
CPNE9-205ENST00000613455 ADAMTS13Q76LX8 1427 aa28.37■■■□□ 2.13
CPNE9-205ENST00000613455 TESK2Q96S53 571 aa28.37■■■□□ 2.13
CPNE9-205ENST00000613455 CCDC7Q96M83 1385 aa28.36■■■□□ 2.13
CPNE9-205ENST00000613455 DIEXFQ68CQ4 756 aaKnown RBP28.36■■■□□ 2.13
CPNE9-205ENST00000613455 YTHDC2Q9H6S0 1430 aaKnown RBP28.34■■■□□ 2.13
CPNE9-205ENST00000613455 KIF7Q2M1P5 1343 aa28.34■■■□□ 2.13
CPNE9-205ENST00000613455 TRAK1Q9UPV9 953 aa28.33■■■□□ 2.13
CPNE9-205ENST00000613455 MED14O60244 1454 aa28.33■■■□□ 2.13
CPNE9-205ENST00000613455 METP08581 1390 aa28.31■■■□□ 2.12
CPNE9-205ENST00000613455 QRICH2Q9H0J4 1663 aa28.29■■■□□ 2.12
CPNE9-205ENST00000613455 DIP2AQ14689 1571 aa28.28■■■□□ 2.12
CPNE9-205ENST00000613455 LRPPRCP42704 1394 aaKnown RBP28.27■■■□□ 2.12
CPNE9-205ENST00000613455 DDX10Q13206 875 aaKnown RBP28.27■■■□□ 2.12
CPNE9-205ENST00000613455 BCANQ96GW7 911 aa28.27■■■□□ 2.12
CPNE9-205ENST00000613455 DISP3Q9P2K9 1392 aa28.27■■■□□ 2.12
CPNE9-205ENST00000613455 KNDC1Q76NI1 1749 aa28.26■■■□□ 2.11
CPNE9-205ENST00000613455 SBNO2Q9Y2G9 1366 aa28.26■■■□□ 2.11
CPNE9-205ENST00000613455 CENPJQ9HC77 1338 aaPredicted RBP28.26■■■□□ 2.11
CPNE9-205ENST00000613455 ANKLE2Q86XL3 938 aa28.26■■■□□ 2.11
CPNE9-205ENST00000613455 DLC1Q96QB1 1528 aa28.25■■■□□ 2.11
CPNE9-205ENST00000613455 STK26Q9P289 416 aa28.25■■■□□ 2.11
CPNE9-205ENST00000613455 ABCC11Q96J66 1382 aa28.22■■■□□ 2.11
CPNE9-205ENST00000613455 SLC26A8Q96RN1 970 aa28.22■■■□□ 2.11
CPNE9-205ENST00000613455 TMF1P82094 1093 aa28.21■■■□□ 2.11
CPNE9-205ENST00000613455 TECPR2O15040 1411 aa28.21■■■□□ 2.11
CPNE9-205ENST00000613455 TBX22Q9Y458 520 aa28.2■■■□□ 2.1
CPNE9-205ENST00000613455 CPS1P31327 1500 aa28.2■■■□□ 2.1
CPNE9-205ENST00000613455 LMTK3Q96Q04 1460 aa28.2■■■□□ 2.1
CPNE9-205ENST00000613455 PTPRUQ92729 1446 aa28.17■■■□□ 2.1
CPNE9-205ENST00000613455 NPHP4O75161 1426 aaPredicted RBP28.16■■■□□ 2.1
CPNE9-205ENST00000613455 POLR3GLQ9BT43 218 aa28.15■■■□□ 2.1
CPNE9-205ENST00000613455 PRAM1Q96QH2 718 aa28.15■■■□□ 2.1
CPNE9-205ENST00000613455 XRN1Q8IZH2 1706 aaKnown RBP28.14■■■□□ 2.09
CPNE9-205ENST00000613455 SLC24A1O60721 1099 aa28.13■■■□□ 2.09
CPNE9-205ENST00000613455 TULP4Q9NRJ4 1543 aa28.12■■■□□ 2.09
CPNE9-205ENST00000613455 NCKAP5LQ9HCH0 1330 aa28.12■■■□□ 2.09
CPNE9-205ENST00000613455 PLEKHH1Q9ULM0 1364 aa28.12■■■□□ 2.09
CPNE9-205ENST00000613455 FAM135BQ49AJ0 1406 aa28.12■■■□□ 2.09
CPNE9-205ENST00000613455 SAFB2Q14151 953 aaKnown RBP eCLIP28.11■■■□□ 2.09
CPNE9-205ENST00000613455 PIK3R4Q99570 1358 aa28.11■■■□□ 2.09
CPNE9-205ENST00000613455 POGKQ9P215 609 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 ROBO2Q9HCK4 1378 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 HSPA2P54652 639 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 SIRT1Q96EB6 747 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 MYOM1P52179 1685 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 CHD2O14647 1828 aaKnown RBP28.08■■■□□ 2.09
CPNE9-205ENST00000613455 CDCA8Q53HL2 280 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms