RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 UBR1Q8IWV7 1749 aa28.76■■■□□ 2.2
CPNE9-205ENST00000613455 ADGRF5Q8IZF2 1346 aa28.76■■■□□ 2.19
CPNE9-205ENST00000613455 MYO3AQ8NEV4 1616 aa28.74■■■□□ 2.19
CPNE9-205ENST00000613455 PLPPR3Q6T4P5 718 aa28.74■■■□□ 2.19
CPNE9-205ENST00000613455 KIAA1210Q9ULL0 1709 aa28.74■■■□□ 2.19
CPNE9-205ENST00000613455 GPRASP1Q5JY77 1395 aa28.72■■■□□ 2.19
CPNE9-205ENST00000613455 STAG3Q9UJ98 1225 aa28.72■■■□□ 2.19
CPNE9-205ENST00000613455 LAMC1P11047 1609 aa28.72■■■□□ 2.19
CPNE9-205ENST00000613455 ROCK2O75116 1388 aaKnown RBP28.72■■■□□ 2.19
CPNE9-205ENST00000613455 PIK3C2GO75747 1445 aa28.71■■■□□ 2.19
CPNE9-205ENST00000613455 ZFYVE9O95405 1425 aa28.71■■■□□ 2.19
CPNE9-205ENST00000613455 NBPF1Q3BBV0 1214 aa28.69■■■□□ 2.18
CPNE9-205ENST00000613455 PTPRMP28827 1452 aa28.68■■■□□ 2.18
CPNE9-205ENST00000613455 EIF4G2P78344 907 aaKnown RBP eCLIP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 VGFO15240 615 aaPredicted RBP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 HSPA5P11021 654 aaKnown RBP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 NUTM2DQ5VT03 806 aaPredicted RBP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 HIRIP3Q9BW71 556 aaPredicted RBP28.66■■■□□ 2.18
CPNE9-205ENST00000613455 CARD11Q9BXL7 1154 aa28.66■■■□□ 2.18
CPNE9-205ENST00000613455 USP47Q96K76 1375 aa28.65■■■□□ 2.18
CPNE9-205ENST00000613455 RIMS2Q9UQ26 1411 aa28.65■■■□□ 2.18
CPNE9-205ENST00000613455 CEP170BQ9Y4F5 1589 aaPredicted RBP28.62■■■□□ 2.17
CPNE9-205ENST00000613455 ZNF142P52746 1687 aaPredicted RBP28.61■■■□□ 2.17
CPNE9-205ENST00000613455 SETD1BQ9UPS6 1966 aaKnown RBP28.61■■■□□ 2.17
CPNE9-205ENST00000613455 CFAP70Q5T0N1 1121 aa28.6■■■□□ 2.17
CPNE9-205ENST00000613455 TMEM2Q9UHN6 1383 aa28.6■■■□□ 2.17
CPNE9-205ENST00000613455 IQGAP1P46940 1657 aa28.6■■■□□ 2.17
CPNE9-205ENST00000613455 SETBP1Q9Y6X0 1596 aa28.59■■■□□ 2.17
CPNE9-205ENST00000613455 C14orf93Q9H972 538 aaKnown RBP28.57■■■□□ 2.16
CPNE9-205ENST00000613455 SLIT1O75093 1534 aa28.56■■■□□ 2.16
CPNE9-205ENST00000613455 ADGRB1O14514 1584 aa28.56■■■□□ 2.16
CPNE9-205ENST00000613455 ARHGAP23Q9P227 1491 aa28.55■■■□□ 2.16
CPNE9-205ENST00000613455 NRXN3Q9Y4C0 1643 aa28.53■■■□□ 2.16
CPNE9-205ENST00000613455 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.52■■■□□ 2.16
CPNE9-205ENST00000613455 SCAF11Q99590 1463 aaKnown RBP28.51■■■□□ 2.16
CPNE9-205ENST00000613455 ASXL1Q8IXJ9 1541 aa28.51■■■□□ 2.15
CPNE9-205ENST00000613455 ALKQ9UM73 1620 aa28.5■■■□□ 2.15
CPNE9-205ENST00000613455 SETD1AO15047 1707 aaKnown RBP28.5■■■□□ 2.15
CPNE9-205ENST00000613455 KDM4FA0A1W2PPD8 638 aa28.49■■■□□ 2.15
CPNE9-205ENST00000613455 THEMISQ8N1K5 641 aaPredicted RBP28.48■■■□□ 2.15
CPNE9-205ENST00000613455 ST20-MTHFSA0A0A6YYL1 179 aa28.47■■■□□ 2.15
CPNE9-205ENST00000613455 HDGFP51858 240 aaKnown RBP28.47■■■□□ 2.15
CPNE9-205ENST00000613455 POLR1AO95602 1720 aaPredicted RBP28.47■■■□□ 2.15
CPNE9-205ENST00000613455 LTKP29376 864 aa28.46■■■□□ 2.15
CPNE9-205ENST00000613455 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
CPNE9-205ENST00000613455 TMEM132EQ6IEE7 984 aa28.43■■■□□ 2.14
CPNE9-205ENST00000613455 PLEKHG1Q9ULL1 1385 aa28.42■■■□□ 2.14
CPNE9-205ENST00000613455 C11orf95C9JLR9 678 aaPredicted RBP28.41■■■□□ 2.14
CPNE9-205ENST00000613455 TXNDC2Q86VQ3 553 aa28.4■■■□□ 2.14
CPNE9-205ENST00000613455 EIF3AQ14152 1382 aaKnown RBP28.4■■■□□ 2.14
CPNE9-205ENST00000613455 WASHC2AQ641Q2 1341 aa28.39■■■□□ 2.14
CPNE9-205ENST00000613455 EID1Q9Y6B2 187 aa28.39■■■□□ 2.14
CPNE9-205ENST00000613455 ARHGEF28Q8N1W1 1705 aaKnown RBP28.38■■■□□ 2.13
CPNE9-205ENST00000613455 ADAMTS13Q76LX8 1427 aa28.37■■■□□ 2.13
CPNE9-205ENST00000613455 TESK2Q96S53 571 aa28.37■■■□□ 2.13
CPNE9-205ENST00000613455 CCDC7Q96M83 1385 aa28.36■■■□□ 2.13
CPNE9-205ENST00000613455 DIEXFQ68CQ4 756 aaKnown RBP28.36■■■□□ 2.13
CPNE9-205ENST00000613455 YTHDC2Q9H6S0 1430 aaKnown RBP28.34■■■□□ 2.13
CPNE9-205ENST00000613455 KIF7Q2M1P5 1343 aa28.34■■■□□ 2.13
CPNE9-205ENST00000613455 TRAK1Q9UPV9 953 aa28.33■■■□□ 2.13
CPNE9-205ENST00000613455 MED14O60244 1454 aa28.33■■■□□ 2.13
CPNE9-205ENST00000613455 METP08581 1390 aa28.31■■■□□ 2.12
CPNE9-205ENST00000613455 QRICH2Q9H0J4 1663 aa28.29■■■□□ 2.12
CPNE9-205ENST00000613455 DIP2AQ14689 1571 aa28.28■■■□□ 2.12
CPNE9-205ENST00000613455 LRPPRCP42704 1394 aaKnown RBP28.27■■■□□ 2.12
CPNE9-205ENST00000613455 DDX10Q13206 875 aaKnown RBP28.27■■■□□ 2.12
CPNE9-205ENST00000613455 BCANQ96GW7 911 aa28.27■■■□□ 2.12
CPNE9-205ENST00000613455 DISP3Q9P2K9 1392 aa28.27■■■□□ 2.12
CPNE9-205ENST00000613455 KNDC1Q76NI1 1749 aa28.26■■■□□ 2.11
CPNE9-205ENST00000613455 SBNO2Q9Y2G9 1366 aa28.26■■■□□ 2.11
CPNE9-205ENST00000613455 CENPJQ9HC77 1338 aaPredicted RBP28.26■■■□□ 2.11
CPNE9-205ENST00000613455 ANKLE2Q86XL3 938 aa28.26■■■□□ 2.11
CPNE9-205ENST00000613455 DLC1Q96QB1 1528 aa28.25■■■□□ 2.11
CPNE9-205ENST00000613455 STK26Q9P289 416 aa28.25■■■□□ 2.11
CPNE9-205ENST00000613455 ABCC11Q96J66 1382 aa28.22■■■□□ 2.11
CPNE9-205ENST00000613455 SLC26A8Q96RN1 970 aa28.22■■■□□ 2.11
CPNE9-205ENST00000613455 TMF1P82094 1093 aa28.21■■■□□ 2.11
CPNE9-205ENST00000613455 TECPR2O15040 1411 aa28.21■■■□□ 2.11
CPNE9-205ENST00000613455 TBX22Q9Y458 520 aa28.2■■■□□ 2.1
CPNE9-205ENST00000613455 CPS1P31327 1500 aa28.2■■■□□ 2.1
CPNE9-205ENST00000613455 LMTK3Q96Q04 1460 aa28.2■■■□□ 2.1
CPNE9-205ENST00000613455 PTPRUQ92729 1446 aa28.17■■■□□ 2.1
CPNE9-205ENST00000613455 NPHP4O75161 1426 aaPredicted RBP28.16■■■□□ 2.1
CPNE9-205ENST00000613455 POLR3GLQ9BT43 218 aa28.15■■■□□ 2.1
CPNE9-205ENST00000613455 PRAM1Q96QH2 718 aa28.15■■■□□ 2.1
CPNE9-205ENST00000613455 XRN1Q8IZH2 1706 aaKnown RBP28.14■■■□□ 2.09
CPNE9-205ENST00000613455 SLC24A1O60721 1099 aa28.13■■■□□ 2.09
CPNE9-205ENST00000613455 TULP4Q9NRJ4 1543 aa28.12■■■□□ 2.09
CPNE9-205ENST00000613455 NCKAP5LQ9HCH0 1330 aa28.12■■■□□ 2.09
CPNE9-205ENST00000613455 PLEKHH1Q9ULM0 1364 aa28.12■■■□□ 2.09
CPNE9-205ENST00000613455 FAM135BQ49AJ0 1406 aa28.12■■■□□ 2.09
CPNE9-205ENST00000613455 SAFB2Q14151 953 aaKnown RBP eCLIP28.11■■■□□ 2.09
CPNE9-205ENST00000613455 PIK3R4Q99570 1358 aa28.11■■■□□ 2.09
CPNE9-205ENST00000613455 POGKQ9P215 609 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 ROBO2Q9HCK4 1378 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 HSPA2P54652 639 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 SIRT1Q96EB6 747 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 MYOM1P52179 1685 aa28.09■■■□□ 2.09
CPNE9-205ENST00000613455 CHD2O14647 1828 aaKnown RBP28.08■■■□□ 2.09
CPNE9-205ENST00000613455 CDCA8Q53HL2 280 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms