RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 NAP1L5Q96NT1 182 aaPredicted RBP14.01□□□□□ -0.17
FAM3A-221ENST00000612856 NUTM2BA6NNL0 878 aaPredicted RBP14□□□□□ -0.17
FAM3A-221ENST00000612856 NUTM2EB1AL46 878 aaPredicted RBP14□□□□□ -0.17
FAM3A-221ENST00000612856 WAPLQ7Z5K2 1190 aa14□□□□□ -0.17
FAM3A-221ENST00000612856 NUTM2AQ8IVF1 878 aaPredicted RBP14□□□□□ -0.17
FAM3A-221ENST00000612856 APBB1O00213 710 aa14□□□□□ -0.17
FAM3A-221ENST00000612856 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
FAM3A-221ENST00000612856 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
FAM3A-221ENST00000612856 ATF3P18847 181 aa14□□□□□ -0.17
FAM3A-221ENST00000612856 IDI1Q13907 227 aa13.99□□□□□ -0.17
FAM3A-221ENST00000612856 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
FAM3A-221ENST00000612856 SLC12A5Q9H2X9 1139 aa13.99□□□□□ -0.17
FAM3A-221ENST00000612856 CHD1O14646 1710 aa13.99□□□□□ -0.17
FAM3A-221ENST00000612856 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
FAM3A-221ENST00000612856 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
FAM3A-221ENST00000612856 ZNF428Q96B54 188 aa13.98□□□□□ -0.17
FAM3A-221ENST00000612856 RTF1Q92541 710 aaKnown RBP13.97□□□□□ -0.17
FAM3A-221ENST00000612856 CLUAP1Q96AJ1 413 aa13.97□□□□□ -0.17
FAM3A-221ENST00000612856 FTSJ3Q8IY81 847 aaKnown RBP13.97□□□□□ -0.17
FAM3A-221ENST00000612856 BCL2L13Q9BXK5 485 aa13.97□□□□□ -0.17
FAM3A-221ENST00000612856 EVA1CP58658 441 aa13.96□□□□□ -0.17
FAM3A-221ENST00000612856 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.96□□□□□ -0.17
FAM3A-221ENST00000612856 ABCA8O94911 1581 aa13.96□□□□□ -0.17
FAM3A-221ENST00000612856 NLRP6P59044 892 aa13.96□□□□□ -0.17
FAM3A-221ENST00000612856 THEMISQ8N1K5 641 aaPredicted RBP13.96□□□□□ -0.17
FAM3A-221ENST00000612856 TRAPPC8Q9Y2L5 1435 aa13.96□□□□□ -0.17
FAM3A-221ENST00000612856 CENPJQ9HC77 1338 aaPredicted RBP13.95□□□□□ -0.18
FAM3A-221ENST00000612856 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
FAM3A-221ENST00000612856 HMOX1P09601 288 aa13.95□□□□□ -0.18
FAM3A-221ENST00000612856 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
FAM3A-221ENST00000612856 ABCC10Q5T3U5 1492 aa13.95□□□□□ -0.18
FAM3A-221ENST00000612856 KTN1Q86UP2 1357 aaKnown RBP13.94□□□□□ -0.18
FAM3A-221ENST00000612856 ASXL2Q76L83 1435 aa13.94□□□□□ -0.18
FAM3A-221ENST00000612856 ITSN2Q9NZM3 1697 aa13.94□□□□□ -0.18
FAM3A-221ENST00000612856 ADGRL1O94910 1474 aa13.94□□□□□ -0.18
FAM3A-221ENST00000612856 EVC2Q86UK5 1308 aa13.94□□□□□ -0.18
FAM3A-221ENST00000612856 RGS3P49796 1198 aa13.93□□□□□ -0.18
FAM3A-221ENST00000612856 GSE1Q14687 1217 aa13.93□□□□□ -0.18
FAM3A-221ENST00000612856 GCC2Q8IWJ2 1684 aa13.93□□□□□ -0.18
FAM3A-221ENST00000612856 ANKLE2Q86XL3 938 aa13.92□□□□□ -0.18
FAM3A-221ENST00000612856 COG3Q96JB2 828 aa13.92□□□□□ -0.18
FAM3A-221ENST00000612856 STRN4Q9NRL3 753 aa13.92□□□□□ -0.18
FAM3A-221ENST00000612856 CABP1Q9NZU7 370 aa13.91□□□□□ -0.18
FAM3A-221ENST00000612856 ABTB2Q8N961 1025 aa13.9□□□□□ -0.18
FAM3A-221ENST00000612856 TEX14Q8IWB6 1497 aa13.9□□□□□ -0.18
FAM3A-221ENST00000612856 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
FAM3A-221ENST00000612856 NLRP2Q9NX02 1062 aa13.9□□□□□ -0.19
FAM3A-221ENST00000612856 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
FAM3A-221ENST00000612856 FOXO3O43524 673 aa13.89□□□□□ -0.19
FAM3A-221ENST00000612856 MEX3CQ5U5Q3 659 aaKnown RBP13.89□□□□□ -0.19
FAM3A-221ENST00000612856 FANCAO15360 1455 aa13.89□□□□□ -0.19
FAM3A-221ENST00000612856 ZC3H6P61129 1189 aaKnown RBP13.89□□□□□ -0.19
FAM3A-221ENST00000612856 EIF3AQ14152 1382 aaKnown RBP13.88□□□□□ -0.19
FAM3A-221ENST00000612856 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.88□□□□□ -0.19
FAM3A-221ENST00000612856 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
FAM3A-221ENST00000612856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.88□□□□□ -0.19
FAM3A-221ENST00000612856 ABCC2Q92887 1545 aa13.87□□□□□ -0.19
FAM3A-221ENST00000612856 FBLN1P23142 703 aa13.87□□□□□ -0.19
FAM3A-221ENST00000612856 CDC42BPAQ5VT25 1732 aa13.87□□□□□ -0.19
FAM3A-221ENST00000612856 PLCH2O75038 1416 aa13.87□□□□□ -0.19
FAM3A-221ENST00000612856 MYH16Q9H6N6 1097 aa13.87□□□□□ -0.19
FAM3A-221ENST00000612856 ADGRF5Q8IZF2 1346 aa13.86□□□□□ -0.19
FAM3A-221ENST00000612856 APAF1O14727 1248 aa13.86□□□□□ -0.19
FAM3A-221ENST00000612856 PDE4AP27815 886 aa13.86□□□□□ -0.19
FAM3A-221ENST00000612856 SLC4A10Q6U841 1118 aa13.86□□□□□ -0.19
FAM3A-221ENST00000612856 SLC52A1Q9NWF4 448 aa13.86□□□□□ -0.19
FAM3A-221ENST00000612856 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
FAM3A-221ENST00000612856 SAMD9LQ8IVG5 1584 aa13.86□□□□□ -0.19
FAM3A-221ENST00000612856 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
FAM3A-221ENST00000612856 FAM135AQ9P2D6 1515 aa13.85□□□□□ -0.19
FAM3A-221ENST00000612856 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
FAM3A-221ENST00000612856 CDK19Q9BWU1 502 aa13.84□□□□□ -0.19
FAM3A-221ENST00000612856 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
FAM3A-221ENST00000612856 HSP90AA1P07900 732 aaKnown RBP13.84□□□□□ -0.19
FAM3A-221ENST00000612856 ARHGEF12Q9NZN5 1544 aa13.84□□□□□ -0.19
FAM3A-221ENST00000612856 NLRP13Q86W25 1043 aa13.83□□□□□ -0.19
FAM3A-221ENST00000612856 ADAMTS2O95450 1211 aa13.83□□□□□ -0.2
FAM3A-221ENST00000612856 EIF2S2P20042 333 aaKnown RBP13.83□□□□□ -0.2
FAM3A-221ENST00000612856 OS9Q13438 667 aaPredicted RBP13.83□□□□□ -0.2
FAM3A-221ENST00000612856 TPRNQ4KMQ1 711 aa13.83□□□□□ -0.2
FAM3A-221ENST00000612856 NFKBIBQ15653 356 aa13.82□□□□□ -0.2
FAM3A-221ENST00000612856 CGNL1Q0VF96 1302 aa13.82□□□□□ -0.2
FAM3A-221ENST00000612856 PLIN1O60240 522 aa13.82□□□□□ -0.2
FAM3A-221ENST00000612856 RRS1Q15050 365 aaKnown RBP13.82□□□□□ -0.2
FAM3A-221ENST00000612856 MTHFSP49914 203 aa13.81□□□□□ -0.2
FAM3A-221ENST00000612856 ERBINQ96RT1 1412 aa13.81□□□□□ -0.2
FAM3A-221ENST00000612856 AMOTL2Q9Y2J4 779 aa13.81□□□□□ -0.2
FAM3A-221ENST00000612856 SKAP1Q86WV1 359 aa13.81□□□□□ -0.2
FAM3A-221ENST00000612856 HSP90AA2PQ14568 343 aaPredicted RBP13.8□□□□□ -0.2
FAM3A-221ENST00000612856 EXOC6Q8TAG9 804 aa13.8□□□□□ -0.2
FAM3A-221ENST00000612856 CHMP3Q9Y3E7 222 aa13.8□□□□□ -0.2
FAM3A-221ENST00000612856 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
FAM3A-221ENST00000612856 ARID3AQ99856 593 aa13.8□□□□□ -0.2
FAM3A-221ENST00000612856 GZF1Q9H116 711 aaPredicted RBP13.8□□□□□ -0.2
FAM3A-221ENST00000612856 DISP3Q9P2K9 1392 aa13.79□□□□□ -0.2
FAM3A-221ENST00000612856 RALBP1Q15311 655 aa13.79□□□□□ -0.2
FAM3A-221ENST00000612856 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
FAM3A-221ENST00000612856 CFAP65Q6ZU64 1925 aaKnown RBP13.78□□□□□ -0.2
FAM3A-221ENST00000612856 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
FAM3A-221ENST00000612856 SHANK2Q9UPX8 1470 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms